RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 COL4A2P08572 1712 aa16.02■□□□□ 0.15
UBXN1-218ENST00000616865 EP300Q09472 2414 aaPredicted RBP16.02■□□□□ 0.15
UBXN1-218ENST00000616865 OTOGLQ3ZCN5 2332 aa16.01■□□□□ 0.15
UBXN1-218ENST00000616865 MED19A0JLT2 244 aaPredicted RBP16.01■□□□□ 0.15
UBXN1-218ENST00000616865 SPTLC1O15269 473 aa16.01■□□□□ 0.15
UBXN1-218ENST00000616865 ECI2O75521 394 aa16.01■□□□□ 0.15
UBXN1-218ENST00000616865 KRT13P13646 458 aa16.01■□□□□ 0.15
UBXN1-218ENST00000616865 PSMC2P35998 433 aaKnown RBP16.01■□□□□ 0.15
UBXN1-218ENST00000616865 PUM1Q14671 1186 aaKnown RBP eCLIP16.01■□□□□ 0.152e-7■■□□□ 12.6
UBXN1-218ENST00000616865 SNRNP35Q16560 246 aaKnown RBP16.01■□□□□ 0.15
UBXN1-218ENST00000616865 SLC5A9Q2M3M2 681 aa16.01■□□□□ 0.15
UBXN1-218ENST00000616865 FAM186BQ8IYM0 893 aa16.01■□□□□ 0.15
UBXN1-218ENST00000616865 CEP120Q8N960 986 aa16.01■□□□□ 0.15
UBXN1-218ENST00000616865 ENOX1Q8TC92 643 aaKnown RBP16.01■□□□□ 0.15
UBXN1-218ENST00000616865 EEF2KMTQ96G04 330 aa16.01■□□□□ 0.15
UBXN1-218ENST00000616865 BORCS6Q96GS4 357 aa16.01■□□□□ 0.15
UBXN1-218ENST00000616865 DUSP9Q99956 384 aaKnown RBP16.01■□□□□ 0.15
UBXN1-218ENST00000616865 BPIFA3Q9BQP9 254 aa16.01■□□□□ 0.15
UBXN1-218ENST00000616865 DMAC2Q9NW81 257 aa16.01■□□□□ 0.15
UBXN1-218ENST00000616865 RBAKQ9NYW8 714 aaPredicted RBP16.01■□□□□ 0.15
UBXN1-218ENST00000616865 PDCD11Q14690 1871 aaKnown RBP16.01■□□□□ 0.15
UBXN1-218ENST00000616865 FAM170BA6NMN3 283 aa16■□□□□ 0.15
UBXN1-218ENST00000616865 GOLGA6L19H0YKK7 550 aa16■□□□□ 0.15
UBXN1-218ENST00000616865 I3L4J1 428 aa16■□□□□ 0.15
UBXN1-218ENST00000616865 SLC16A3O15427 465 aaKnown RBP16■□□□□ 0.15
UBXN1-218ENST00000616865 TRAPPC3O43617 180 aa16■□□□□ 0.15
UBXN1-218ENST00000616865 GNA14O95837 355 aa16■□□□□ 0.15
UBXN1-218ENST00000616865 RHOP08100 348 aa16■□□□□ 0.15
UBXN1-218ENST00000616865 CD72P21854 359 aa16■□□□□ 0.15
UBXN1-218ENST00000616865 TARSP26639 723 aaKnown RBP16■□□□□ 0.15
UBXN1-218ENST00000616865 TNFSF9P41273 254 aa16■□□□□ 0.15
UBXN1-218ENST00000616865 BRCC3P46736 316 aa16■□□□□ 0.15
UBXN1-218ENST00000616865 ROR1Q01973 937 aa16■□□□□ 0.15
UBXN1-218ENST00000616865 PPP2R3AQ06190 1150 aa16■□□□□ 0.15
UBXN1-218ENST00000616865 ZBTB41Q5SVQ8 909 aa16■□□□□ 0.15
UBXN1-218ENST00000616865 TPRG1Q6ZUI0 275 aa16■□□□□ 0.15
UBXN1-218ENST00000616865 FILIP1Q7Z7B0 1213 aa16■□□□□ 0.15
UBXN1-218ENST00000616865 USP37Q86T82 979 aa16■□□□□ 0.15
UBXN1-218ENST00000616865 MCRS1Q96EZ8 462 aa16■□□□□ 0.15
UBXN1-218ENST00000616865 AVENQ9NQS1 362 aaPredicted RBP16■□□□□ 0.15
UBXN1-218ENST00000616865 DLL3Q9NYJ7 618 aa16■□□□□ 0.15
UBXN1-218ENST00000616865 GDE1Q9NZC3 331 aa16■□□□□ 0.15
UBXN1-218ENST00000616865 CPSF3Q9UKF6 684 aaKnown RBP16■□□□□ 0.15
UBXN1-218ENST00000616865 NFE2L3Q9Y4A8 694 aa16■□□□□ 0.15
UBXN1-218ENST00000616865 PCDHGA2Q9Y5H1 932 aa16■□□□□ 0.15
UBXN1-218ENST00000616865 CITO14578 2027 aa15.99■□□□□ 0.15
UBXN1-218ENST00000616865 SMIM28A0A1B0GU29 152 aa15.99■□□□□ 0.15
UBXN1-218ENST00000616865 ARHGEF37A1IGU5 675 aa15.99■□□□□ 0.15
UBXN1-218ENST00000616865 IL18RAPO95256 599 aa15.99■□□□□ 0.15
UBXN1-218ENST00000616865 LRG1P02750 347 aa15.99■□□□□ 0.15
UBXN1-218ENST00000616865 CXCL8P10145 99 aa15.99■□□□□ 0.15
UBXN1-218ENST00000616865 CEBPBP17676 345 aa15.99■□□□□ 0.15
UBXN1-218ENST00000616865 CASP4P49662 377 aa15.99■□□□□ 0.15
UBXN1-218ENST00000616865 SOX4Q06945 474 aaPredicted RBP15.99■□□□□ 0.15
UBXN1-218ENST00000616865 SURF1Q15526 300 aa15.99■□□□□ 0.15
UBXN1-218ENST00000616865 SLC8B1Q6J4K2 584 aa15.99■□□□□ 0.15
UBXN1-218ENST00000616865 CBWD2Q8IUF1 395 aa15.99■□□□□ 0.15
UBXN1-218ENST00000616865 ZSWIM2Q8NEG5 633 aa15.99■□□□□ 0.15
UBXN1-218ENST00000616865 ANKRD20A12PQ8NF67 263 aa15.99■□□□□ 0.15
UBXN1-218ENST00000616865 ZNF461Q8TAF7 563 aa15.99■□□□□ 0.15
UBXN1-218ENST00000616865 TMEM174Q8WUU8 243 aa15.99■□□□□ 0.15
UBXN1-218ENST00000616865 FNBP1Q96RU3 617 aa15.99■□□□□ 0.15
UBXN1-218ENST00000616865 MKNK1Q9BUB5 465 aa15.99■□□□□ 0.15
UBXN1-218ENST00000616865 PLA2G2FQ9BZM2 168 aa15.99■□□□□ 0.15
UBXN1-218ENST00000616865 THAP9Q9H5L6 903 aa15.99■□□□□ 0.15
UBXN1-218ENST00000616865 CBX8Q9HC52 389 aa15.99■□□□□ 0.15
UBXN1-218ENST00000616865 METTL14Q9HCE5 456 aaKnown RBP15.99■□□□□ 0.15
UBXN1-218ENST00000616865 WDR27A2RRH5 827 aa15.98■□□□□ 0.15
UBXN1-218ENST00000616865 IKBKBO14920 756 aa15.98■□□□□ 0.15
UBXN1-218ENST00000616865 MAPK13O15264 365 aa15.98■□□□□ 0.15
UBXN1-218ENST00000616865 TPM2P07951 284 aa15.98■□□□□ 0.15
UBXN1-218ENST00000616865 CDK11BP21127 795 aaKnown RBP15.98■□□□□ 0.15
UBXN1-218ENST00000616865 MTIF2P46199 727 aaKnown RBP15.98■□□□□ 0.15
UBXN1-218ENST00000616865 RPS9P46781 194 aaKnown RBP15.98■□□□□ 0.15
UBXN1-218ENST00000616865 POU5F1Q01860 360 aaKnown RBP15.98■□□□□ 0.15
UBXN1-218ENST00000616865 CSTF1Q05048 431 aaKnown RBP15.98■□□□□ 0.15
UBXN1-218ENST00000616865 CYP24A1Q07973 514 aa15.98■□□□□ 0.15
UBXN1-218ENST00000616865 ENOX2Q16206 610 aaKnown RBP15.98■□□□□ 0.15
UBXN1-218ENST00000616865 XKR4Q5GH76 650 aa15.98■□□□□ 0.15
UBXN1-218ENST00000616865 PRSS36Q5K4E3 855 aa15.98■□□□□ 0.15
UBXN1-218ENST00000616865 VARS2Q5ST30 1063 aaKnown RBP15.98■□□□□ 0.15
UBXN1-218ENST00000616865 POTEHQ6S545 545 aa15.98■□□□□ 0.15
UBXN1-218ENST00000616865 CRELD2Q6UXH1 353 aaPredicted RBP15.98■□□□□ 0.15
UBXN1-218ENST00000616865 BRSK2Q8IWQ3 736 aa15.98■□□□□ 0.15
UBXN1-218ENST00000616865 CD302Q8IX05 232 aa15.98■□□□□ 0.15
UBXN1-218ENST00000616865 ZC3H3Q8IXZ2 948 aaKnown RBP15.98■□□□□ 0.15
UBXN1-218ENST00000616865 ZBTB44Q8NCP5 570 aa15.98■□□□□ 0.15
UBXN1-218ENST00000616865 FAM200AQ8TCP9 573 aa15.98■□□□□ 0.15
UBXN1-218ENST00000616865 DNASE1L2Q92874 299 aa15.98■□□□□ 0.15
UBXN1-218ENST00000616865 CLDN23Q96B33 292 aa15.98■□□□□ 0.15
UBXN1-218ENST00000616865 ELSPBP1Q96BH3 223 aa15.98■□□□□ 0.15
UBXN1-218ENST00000616865 PLEKHA5Q9HAU0 1116 aa15.98■□□□□ 0.15
UBXN1-218ENST00000616865 HEBP1Q9NRV9 189 aa15.98■□□□□ 0.15
UBXN1-218ENST00000616865 NCDNQ9UBB6 729 aa15.98■□□□□ 0.15
UBXN1-218ENST00000616865 ARMCX3Q9UH62 379 aaPredicted RBP15.98■□□□□ 0.15
UBXN1-218ENST00000616865 TICRRQ7Z2Z1 1910 aa15.98■□□□□ 0.15
UBXN1-218ENST00000616865 LACTBL1A8MY62 500 aa15.97■□□□□ 0.15
UBXN1-218ENST00000616865 PODXLO00592 558 aa15.97■□□□□ 0.15
UBXN1-218ENST00000616865 PRRG1O14668 218 aa15.97■□□□□ 0.15
UBXN1-218ENST00000616865 NCAM2O15394 837 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms