RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 NRLP54845 237 aa20.46■□□□□ 0.87
CDX1-202ENST00000616154 PPP2R5DQ14738 602 aa20.46■□□□□ 0.87
CDX1-202ENST00000616154 SLC39A12Q504Y0 691 aa20.46■□□□□ 0.87
CDX1-202ENST00000616154 CNNM4Q6P4Q7 775 aa20.46■□□□□ 0.87
CDX1-202ENST00000616154 DGLUCYQ7Z3D6 616 aa20.46■□□□□ 0.87
CDX1-202ENST00000616154 GPR161Q8N6U8 529 aaKnown RBP20.46■□□□□ 0.87
CDX1-202ENST00000616154 SECISBP2LQ93073 1101 aaKnown RBP20.46■□□□□ 0.87
CDX1-202ENST00000616154 ATXN3LQ9H3M9 355 aa20.46■□□□□ 0.87
CDX1-202ENST00000616154 C8orf33Q9H7E9 229 aaPredicted RBP20.46■□□□□ 0.87
CDX1-202ENST00000616154 DPP3Q9NY33 737 aa20.46■□□□□ 0.87
CDX1-202ENST00000616154 OBP2AQ9NY56 170 aa20.46■□□□□ 0.87
CDX1-202ENST00000616154 DLL3Q9NYJ7 618 aa20.46■□□□□ 0.87
CDX1-202ENST00000616154 CYB561D2O14569 222 aa20.45■□□□□ 0.86
CDX1-202ENST00000616154 WEE1P30291 646 aa20.45■□□□□ 0.86
CDX1-202ENST00000616154 VEPH1Q14D04 833 aa20.45■□□□□ 0.86
CDX1-202ENST00000616154 ARHGAP15Q53QZ3 475 aa20.45■□□□□ 0.86
CDX1-202ENST00000616154 GPR158Q5T848 1215 aa20.45■□□□□ 0.86
CDX1-202ENST00000616154 CRELD2Q6UXH1 353 aaPredicted RBP20.45■□□□□ 0.86
CDX1-202ENST00000616154 METTL23Q86XA0 190 aa20.45■□□□□ 0.86
CDX1-202ENST00000616154 NT5DC4Q86YG4 428 aa20.45■□□□□ 0.86
CDX1-202ENST00000616154 C2orf15Q8WU43 125 aaKnown RBP20.45■□□□□ 0.86
CDX1-202ENST00000616154 SEPT5Q99719 369 aaPredicted RBP20.45■□□□□ 0.86
CDX1-202ENST00000616154 PYM1Q9BRP8 204 aaKnown RBP20.45■□□□□ 0.86
CDX1-202ENST00000616154 OBSL1O75147 1896 aa20.44■□□□□ 0.86
CDX1-202ENST00000616154 IL18RAPO95256 599 aa20.44■□□□□ 0.86
CDX1-202ENST00000616154 ATF6P18850 670 aa20.44■□□□□ 0.86
CDX1-202ENST00000616154 SMARCB1Q12824 385 aa20.44■□□□□ 0.86
CDX1-202ENST00000616154 ALCAMQ13740 583 aa20.44■□□□□ 0.86
CDX1-202ENST00000616154 LRRC32Q14392 662 aa20.44■□□□□ 0.86
CDX1-202ENST00000616154 POSTNQ15063 836 aa20.44■□□□□ 0.86
CDX1-202ENST00000616154 ARHGAP29Q52LW3 1261 aa20.44■□□□□ 0.86
CDX1-202ENST00000616154 EFCAB13Q8IY85 973 aa20.44■□□□□ 0.86
CDX1-202ENST00000616154 THEM5Q8N1Q8 247 aa20.44■□□□□ 0.86
CDX1-202ENST00000616154 FAM200AQ8TCP9 573 aa20.44■□□□□ 0.86
CDX1-202ENST00000616154 POMGNT1Q8WZA1 660 aa20.44■□□□□ 0.86
CDX1-202ENST00000616154 LRRC3BQ96PB8 259 aa20.44■□□□□ 0.86
CDX1-202ENST00000616154 LPIN3Q9BQK8 851 aa20.44■□□□□ 0.86
CDX1-202ENST00000616154 PANK2Q9BZ23 570 aa20.44■□□□□ 0.86
CDX1-202ENST00000616154 IKZF4Q9H2S9 585 aa20.44■□□□□ 0.86
CDX1-202ENST00000616154 RCOR1Q9UKL0 485 aa20.44■□□□□ 0.86
CDX1-202ENST00000616154 CFAP45Q9UL16 551 aa20.44■□□□□ 0.86
CDX1-202ENST00000616154 ZNF638Q14966 1978 aaKnown RBP20.44■□□□□ 0.86
CDX1-202ENST00000616154 NCOR2Q9Y618 2525 aa20.43■□□□□ 0.86
CDX1-202ENST00000616154 MYBPHLA2RUH7 354 aa20.43■□□□□ 0.86
CDX1-202ENST00000616154 SLC38A8A6NNN8 435 aa20.43■□□□□ 0.86
CDX1-202ENST00000616154 DPYSL4O14531 572 aa20.43■□□□□ 0.86
CDX1-202ENST00000616154 CDC25CP30307 473 aa20.43■□□□□ 0.86
CDX1-202ENST00000616154 ADSSP30520 456 aa20.43■□□□□ 0.86
CDX1-202ENST00000616154 KPNA1P52294 538 aaPredicted RBP20.43■□□□□ 0.86
CDX1-202ENST00000616154 GAS6Q14393 721 aa20.43■□□□□ 0.86
CDX1-202ENST00000616154 MGAT5BQ3V5L5 792 aa20.43■□□□□ 0.86
CDX1-202ENST00000616154 L1TD1Q5T7N2 865 aaKnown RBP20.43■□□□□ 0.86
CDX1-202ENST00000616154 FOXD4L5Q5VV16 416 aaPredicted RBP20.43■□□□□ 0.86
CDX1-202ENST00000616154 GPIHBP1Q8IV16 184 aa20.43■□□□□ 0.86
CDX1-202ENST00000616154 SPEM1Q8N4L4 309 aa20.43■□□□□ 0.86
CDX1-202ENST00000616154 PDILTQ8N807 584 aa20.43■□□□□ 0.86
CDX1-202ENST00000616154 SPPL2BQ8TCT7 592 aa20.43■□□□□ 0.86
CDX1-202ENST00000616154 FOXD4L4Q8WXT5 416 aaPredicted RBP20.43■□□□□ 0.86
CDX1-202ENST00000616154 TRIM9Q9C026 710 aa20.43■□□□□ 0.86
CDX1-202ENST00000616154 LRRC27Q9C0I9 530 aa20.43■□□□□ 0.86
CDX1-202ENST00000616154 TASP1Q9H6P5 420 aa20.43■□□□□ 0.86
CDX1-202ENST00000616154 MRPL44Q9H9J2 332 aaKnown RBP20.43■□□□□ 0.86
CDX1-202ENST00000616154 MAGEF1Q9HAY2 307 aa20.43■□□□□ 0.86
CDX1-202ENST00000616154 IL21Q9HBE4 155 aa20.43■□□□□ 0.86
CDX1-202ENST00000616154 PCDHA7Q9UN72 937 aa20.43■□□□□ 0.86
CDX1-202ENST00000616154 SPECC1L-ADORA2AF8WAN1 911 aa20.42■□□□□ 0.86
CDX1-202ENST00000616154 PRAMEF12O95522 483 aa20.42■□□□□ 0.86
CDX1-202ENST00000616154 CTHP32929 405 aa20.42■□□□□ 0.86
CDX1-202ENST00000616154 CXCL12P48061 93 aa20.42■□□□□ 0.86
CDX1-202ENST00000616154 SOX9P48436 509 aa20.42■□□□□ 0.86
CDX1-202ENST00000616154 SATB1Q01826 763 aa20.42■□□□□ 0.86
CDX1-202ENST00000616154 RSPO4Q2I0M5 234 aaPredicted RBP20.42■□□□□ 0.86
CDX1-202ENST00000616154 SV2CQ496J9 727 aa20.42■□□□□ 0.86
CDX1-202ENST00000616154 WSCD1Q658N2 575 aa20.42■□□□□ 0.86
CDX1-202ENST00000616154 LRRTM3Q86VH5 581 aa20.42■□□□□ 0.86
CDX1-202ENST00000616154 RALGPS2Q86X27 583 aaPredicted RBP20.42■□□□□ 0.86
CDX1-202ENST00000616154 IQUBQ8NA54 791 aa20.42■□□□□ 0.86
CDX1-202ENST00000616154 ZNF560Q96MR9 790 aa20.42■□□□□ 0.86
CDX1-202ENST00000616154 GCNAQ96QF7 691 aa20.42■□□□□ 0.86
CDX1-202ENST00000616154 EXOC7Q9UPT5 735 aa20.42■□□□□ 0.86
CDX1-202ENST00000616154 MED19A0JLT2 244 aaPredicted RBP20.41■□□□□ 0.86
CDX1-202ENST00000616154 KPNA7A9QM74 516 aa20.41■□□□□ 0.86
CDX1-202ENST00000616154 PAPSS2O95340 614 aaPredicted RBP20.41■□□□□ 0.86
CDX1-202ENST00000616154 HAPLN1P10915 354 aaPredicted RBP20.41■□□□□ 0.86
CDX1-202ENST00000616154 CASP5P51878 434 aa20.41■□□□□ 0.86
CDX1-202ENST00000616154 CYP4F8P98187 520 aa20.41■□□□□ 0.86
CDX1-202ENST00000616154 PLCB2Q00722 1185 aa20.41■□□□□ 0.86
CDX1-202ENST00000616154 DNM1Q05193 864 aaKnown RBP20.41■□□□□ 0.86
CDX1-202ENST00000616154 WDR44Q5JSH3 913 aa20.41■□□□□ 0.86
CDX1-202ENST00000616154 DGKKQ5KSL6 1271 aa20.41■□□□□ 0.86
CDX1-202ENST00000616154 RESP18Q5W5W9 173 aa20.41■□□□□ 0.86
CDX1-202ENST00000616154 TXNDC11Q6PKC3 985 aa20.41■□□□□ 0.86
CDX1-202ENST00000616154 DCP1BQ8IZD4 617 aaKnown RBP20.41■□□□□ 0.86
CDX1-202ENST00000616154 BPIFB1Q8TDL5 484 aa20.41■□□□□ 0.86
CDX1-202ENST00000616154 ZFYVE19Q96K21 471 aa20.41■□□□□ 0.86
CDX1-202ENST00000616154 PANK4Q9NVE7 773 aa20.41■□□□□ 0.86
CDX1-202ENST00000616154 GTSE1Q9NYZ3 720 aa20.41■□□□□ 0.86
CDX1-202ENST00000616154 ZMYM5Q9UJ78 669 aa20.41■□□□□ 0.86
CDX1-202ENST00000616154 PCDHB13Q9Y5F0 798 aa20.41■□□□□ 0.86
CDX1-202ENST00000616154 IDEP14735 1019 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms