RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 CCDC142Q17RM4 750 aa8.59□□□□□ -1.03
PCDH9-205ENST00000614931 SOWAHAQ2M3V2 549 aa8.59□□□□□ -1.03
PCDH9-205ENST00000614931 SV2CQ496J9 727 aa8.59□□□□□ -1.03
PCDH9-205ENST00000614931 SPOUT1Q5T280 376 aaKnown RBP8.59□□□□□ -1.03
PCDH9-205ENST00000614931 SFMBT2Q5VUG0 894 aa8.59□□□□□ -1.03
PCDH9-205ENST00000614931 PTCRAQ6ISU1 281 aaPredicted RBP8.59□□□□□ -1.03
PCDH9-205ENST00000614931 RAD9BQ6WBX8 426 aa8.59□□□□□ -1.03
PCDH9-205ENST00000614931 ABI1Q8IZP0 508 aa8.59□□□□□ -1.03
PCDH9-205ENST00000614931 LRRC43Q8N309 656 aa8.59□□□□□ -1.03
PCDH9-205ENST00000614931 RBBP8NLQ8NC74 664 aaPredicted RBP8.59□□□□□ -1.03
PCDH9-205ENST00000614931 SLC20A1Q8WUM9 679 aa8.59□□□□□ -1.03
PCDH9-205ENST00000614931 RSPH1Q8WYR4 309 aa8.59□□□□□ -1.03
PCDH9-205ENST00000614931 SENP8Q96LD8 212 aa8.59□□□□□ -1.03
PCDH9-205ENST00000614931 SYT11Q9BT88 431 aa8.59□□□□□ -1.03
PCDH9-205ENST00000614931 CISHQ9NSE2 258 aa8.59□□□□□ -1.03
PCDH9-205ENST00000614931 GDAP2Q9NXN4 497 aa8.59□□□□□ -1.03
PCDH9-205ENST00000614931 CLDND1Q9NY35 253 aa8.59□□□□□ -1.03
PCDH9-205ENST00000614931 AIPL1Q9NZN9 384 aa8.59□□□□□ -1.03
PCDH9-205ENST00000614931 PYCARDQ9ULZ3 195 aa8.59□□□□□ -1.03
PCDH9-205ENST00000614931 MYO6Q9UM54 1294 aa8.59□□□□□ -1.03
PCDH9-205ENST00000614931 CNTN6Q9UQ52 1028 aa8.59□□□□□ -1.03
PCDH9-205ENST00000614931 PRG3Q9Y2Y8 225 aaPredicted RBP8.59□□□□□ -1.03
PCDH9-205ENST00000614931 NT5C1B-RDH14C9J2C7 533 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 TMEM189-UBE2V1I3L0A0 370 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 M0QZQ0 153 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 NRP1O14786 923 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 FSCN2O14926 492 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 CILPO75339 1184 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 GALTP07902 379 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 CFHP08603 1231 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 TPM1P09493 284 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 KRT5P13647 590 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 IL9P15248 144 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 CHRNB2P17787 502 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 USP8P40818 1118 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 PNPLA4P41247 253 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 PRKCIP41743 596 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 OR1G1P47890 313 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 RAD23BP54727 409 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 BCAR1P56945 870 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 ERVFC1P60507 584 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 TNNC1P63316 161 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 RNASELQ05823 741 aaKnown RBP8.58□□□□□ -1.04
PCDH9-205ENST00000614931 DLX2Q07687 328 aaPredicted RBP8.58□□□□□ -1.04
PCDH9-205ENST00000614931 INCA1Q0VD86 236 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 MYO1EQ12965 1108 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 ZNF394Q53GI3 561 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 WSCD1Q658N2 575 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 PDE12Q6L8Q7 609 aaKnown RBP8.58□□□□□ -1.04
PCDH9-205ENST00000614931 TMEM270Q6UE05 265 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 KCNT2Q6UVM3 1135 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 ENOSF1Q7L5Y1 443 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 ZNF571Q7Z3V5 609 aaPredicted RBP8.58□□□□□ -1.04
PCDH9-205ENST00000614931 ADGRD2Q7Z7M1 963 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 NOP9Q86U38 636 aaKnown RBP8.58□□□□□ -1.04
PCDH9-205ENST00000614931 SLC47A2Q86VL8 602 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 PALB2Q86YC2 1186 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 PDCL2Q8N4E4 241 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 EFHBQ8N7U6 833 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 SLC4A11Q8NBS3 891 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 LNX1Q8TBB1 728 aaPredicted RBP8.58□□□□□ -1.04
PCDH9-205ENST00000614931 EPS8L1Q8TE68 723 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 DDX1Q92499 740 aaKnown RBP8.58□□□□□ -1.04
PCDH9-205ENST00000614931 SYN2Q92777 582 aaPredicted RBP8.58□□□□□ -1.04
PCDH9-205ENST00000614931 PPP2R3CQ969Q6 453 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 DDX27Q96GQ7 796 aaKnown RBP8.58□□□□□ -1.04
PCDH9-205ENST00000614931 UROC1Q96N76 676 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 ZNF558Q96NG5 402 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 LPIN3Q9BQK8 851 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 ZSWIM1Q9BR11 485 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 VN1R3Q9BXE9 311 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 MRPL9Q9BYD2 267 aaKnown RBP8.58□□□□□ -1.04
PCDH9-205ENST00000614931 DPEP3Q9H4B8 488 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 IGFLR1Q9H665 355 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 HAUS4Q9H6D7 363 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 CYP3A43Q9HB55 503 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 CD320Q9NPF0 282 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.58□□□□□ -1.04
PCDH9-205ENST00000614931 KANSL3Q9P2N6 904 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 NOCTQ9UK39 431 aaKnown RBP8.58□□□□□ -1.04
PCDH9-205ENST00000614931 NENFQ9UMX5 172 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 LZTS1Q9Y250 596 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 PCDHB4Q9Y5E5 795 aa8.58□□□□□ -1.04
PCDH9-205ENST00000614931 TIMM13Q9Y5L4 95 aaPredicted RBP8.58□□□□□ -1.04
PCDH9-205ENST00000614931 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.58□□□□□ -1.04
PCDH9-205ENST00000614931 PLXNA3P51805 1871 aa8.57□□□□□ -1.04
PCDH9-205ENST00000614931 CUL9Q8IWT3 2517 aa8.57□□□□□ -1.04
PCDH9-205ENST00000614931 GREB1Q4ZG55 1949 aa8.57□□□□□ -1.04
PCDH9-205ENST00000614931 CYB561D2O14569 222 aa8.57□□□□□ -1.04
PCDH9-205ENST00000614931 ZNF263O14978 683 aa8.57□□□□□ -1.04
PCDH9-205ENST00000614931 LINC01565O15544 149 aa8.57□□□□□ -1.04
PCDH9-205ENST00000614931 TBX10O75333 385 aa8.57□□□□□ -1.04
PCDH9-205ENST00000614931 B3GAT3O94766 335 aa8.57□□□□□ -1.04
PCDH9-205ENST00000614931 CSPG5O95196 566 aa8.57□□□□□ -1.04
PCDH9-205ENST00000614931 EFEMP2O95967 443 aa8.57□□□□□ -1.04
PCDH9-205ENST00000614931 SERPING1P05155 500 aa8.57□□□□□ -1.04
PCDH9-205ENST00000614931 FERP16591 822 aa8.57□□□□□ -1.04
PCDH9-205ENST00000614931 WARSP23381 471 aaKnown RBP8.57□□□□□ -1.04
PCDH9-205ENST00000614931 BRD2P25440 801 aaKnown RBP8.57□□□□□ -1.04
PCDH9-205ENST00000614931 LMO2P25791 158 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms