RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 WDR46O15213 610 aaKnown RBP13.18□□□□□ -0.3
MSH6-213ENST00000614496 ALDH18A1P54886 795 aaKnown RBP13.18□□□□□ -0.3
MSH6-213ENST00000614496 ACTR2P61160 394 aa13.18□□□□□ -0.3
MSH6-213ENST00000614496 FASTKD3Q14CZ7 662 aaKnown RBP13.18□□□□□ -0.3
MSH6-213ENST00000614496 PGM5Q15124 567 aa13.18□□□□□ -0.3
MSH6-213ENST00000614496 DUOXA2Q1HG44 320 aa13.18□□□□□ -0.3
MSH6-213ENST00000614496 ZNF568Q3ZCX4 644 aa13.18□□□□□ -0.3
MSH6-213ENST00000614496 XKR3Q5GH77 459 aa13.18□□□□□ -0.3
MSH6-213ENST00000614496 AP1ARQ63HQ0 302 aa13.18□□□□□ -0.3
MSH6-213ENST00000614496 TMEM154Q6P9G4 183 aa13.18□□□□□ -0.3
MSH6-213ENST00000614496 ECHDC2Q86YB7 292 aa13.18□□□□□ -0.3
MSH6-213ENST00000614496 ATP2A3Q93084 1043 aa13.18□□□□□ -0.3
MSH6-213ENST00000614496 GPR88Q9GZN0 384 aa13.18□□□□□ -0.3
MSH6-213ENST00000614496 RANBP17Q9H2T7 1088 aaKnown RBP13.18□□□□□ -0.3
MSH6-213ENST00000614496 DDX56Q9NY93 547 aaKnown RBP13.18□□□□□ -0.3
MSH6-213ENST00000614496 DLGAP2Q9P1A6 1054 aa13.18□□□□□ -0.3
MSH6-213ENST00000614496 TTLL3Q9Y4R7 772 aa13.18□□□□□ -0.3
MSH6-213ENST00000614496 DOT1LQ8TEK3 1739 aa13.18□□□□□ -0.3
MSH6-213ENST00000614496 ZWINTO95229 277 aa13.18□□□□□ -0.3
MSH6-213ENST00000614496 APRTP07741 180 aa13.18□□□□□ -0.3
MSH6-213ENST00000614496 NCF2P19878 526 aaPredicted RBP13.18□□□□□ -0.3
MSH6-213ENST00000614496 MAPK6Q16659 721 aa13.18□□□□□ -0.3
MSH6-213ENST00000614496 PPP1R2P3Q6NXS1 205 aa13.18□□□□□ -0.3
MSH6-213ENST00000614496 VSTM1Q6UX27 236 aa13.18□□□□□ -0.3
MSH6-213ENST00000614496 NUDCD3Q8IVD9 361 aa13.18□□□□□ -0.3
MSH6-213ENST00000614496 MAP4K3Q8IVH8 894 aa13.18□□□□□ -0.3
MSH6-213ENST00000614496 RNF149Q8NC42 400 aa13.18□□□□□ -0.3
MSH6-213ENST00000614496 TCP10LQ8TDR4 215 aa13.18□□□□□ -0.3
MSH6-213ENST00000614496 CCDC124Q96CT7 223 aaKnown RBP13.18□□□□□ -0.3
MSH6-213ENST00000614496 TRIM4Q9C037 500 aa13.18□□□□□ -0.3
MSH6-213ENST00000614496 AS3MTQ9HBK9 375 aa13.18□□□□□ -0.3
MSH6-213ENST00000614496 COL20A1Q9P218 1284 aa13.18□□□□□ -0.3
MSH6-213ENST00000614496 NVLO15381 856 aaKnown RBP13.18□□□□□ -0.3
MSH6-213ENST00000614496 MED7O43513 233 aa13.18□□□□□ -0.3
MSH6-213ENST00000614496 ENTPD5O75356 428 aa13.18□□□□□ -0.3
MSH6-213ENST00000614496 SNRPFP62306 86 aaKnown RBP13.18□□□□□ -0.3
MSH6-213ENST00000614496 ROR1Q01973 937 aa13.18□□□□□ -0.3
MSH6-213ENST00000614496 C1orf146Q5VVC0 180 aa13.18□□□□□ -0.3
MSH6-213ENST00000614496 CRLF3Q8IUI8 442 aa13.18□□□□□ -0.3
MSH6-213ENST00000614496 TTLL6Q8N841 843 aa13.18□□□□□ -0.3
MSH6-213ENST00000614496 PPP4R1Q8TF05 950 aa13.18□□□□□ -0.3
MSH6-213ENST00000614496 ACAP3Q96P50 834 aa13.18□□□□□ -0.3
MSH6-213ENST00000614496 CYP4F11Q9HBI6 524 aa13.18□□□□□ -0.3
MSH6-213ENST00000614496 STK32BQ9NY57 414 aa13.18□□□□□ -0.3
MSH6-213ENST00000614496 ASTN2O75129 1339 aaPredicted RBP13.18□□□□□ -0.3
MSH6-213ENST00000614496 B2RBV5 119 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 CCDC22O60826 627 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 UNC5CO95185 931 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 TAC1P20366 129 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 MYL6P60660 151 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 GCNT1Q02742 428 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 MFSD5Q6N075 450 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 WRNIP1Q96S55 665 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 FOXP3Q9BZS1 431 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 A1CFQ9NQ94 594 aaKnown RBP13.17□□□□□ -0.3
MSH6-213ENST00000614496 MYH7BA7E2Y1 1941 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 PLCH1Q4KWH8 1693 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 E2F8A0AVK6 867 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 H3BRJ5 948 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 KCNN4O15554 427 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 YY1P25490 414 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 MAMLD1Q13495 774 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 TFDP3Q5H9I0 405 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 EMC10Q5UCC4 262 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 FAM160B1Q5W0V3 765 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 ZDHHC14Q8IZN3 488 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 NME8Q8N427 588 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 LRRC71Q8N4P6 559 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 DEPDC1BQ8WUY9 529 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 SREK1Q8WXA9 508 aaKnown RBP13.17□□□□□ -0.3
MSH6-213ENST00000614496 ZNF75CPQ92670 426 aaPredicted RBP13.17□□□□□ -0.3
MSH6-213ENST00000614496 IFT122Q9HBG6 1241 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 CCDC88AQ3V6T2 1871 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 SPECC1L-ADORA2AF8WAN1 911 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 MAPTP10636 758 aaKnown RBP13.17□□□□□ -0.3
MSH6-213ENST00000614496 RGS7P49802 495 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 ZNF200P98182 395 aaPredicted RBP13.17□□□□□ -0.3
MSH6-213ENST00000614496 KLC1Q07866 573 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 PIGHQ14442 188 aaPredicted RBP13.17□□□□□ -0.3
MSH6-213ENST00000614496 ARID3BQ8IVW6 561 aaPredicted RBP13.17□□□□□ -0.3
MSH6-213ENST00000614496 PPIL6Q8IXY8 311 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 THTPAQ9BU02 230 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 TUBB6Q9BUF5 446 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 SHCBP1LQ9BZQ2 653 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 BGNP21810 368 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 STXBP2Q15833 593 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 LRRC6Q86X45 466 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 ZCCHC9Q8N567 271 aaKnown RBP13.17□□□□□ -0.3
MSH6-213ENST00000614496 CCNYQ8ND76 341 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 BSNDQ8WZ55 320 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 FAM149B1Q96BN6 582 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 TBC1D10AQ9BXI6 508 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 RPF1Q9H9Y2 349 aaKnown RBP13.17□□□□□ -0.3
MSH6-213ENST00000614496 ARMCX1Q9P291 453 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 STRIP2Q9ULQ0 834 aa13.17□□□□□ -0.3
MSH6-213ENST00000614496 TRIM49D1C9J1S8 452 aa13.16□□□□□ -0.3
MSH6-213ENST00000614496 LMNAP02545 664 aaKnown RBP13.16□□□□□ -0.3
MSH6-213ENST00000614496 P4HA1P13674 534 aa13.16□□□□□ -0.3
MSH6-213ENST00000614496 GARTP22102 1010 aa13.16□□□□□ -0.3
MSH6-213ENST00000614496 FOXN2P32314 431 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms