RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 PDE12Q6L8Q7 609 aaKnown RBP15.68■□□□□ 0.1
CD48-203ENST00000613788 CNGA4Q8IV77 575 aa15.68■□□□□ 0.1
CD48-203ENST00000613788 CRYBG2Q8N1P7 616 aa15.68■□□□□ 0.1
CD48-203ENST00000613788 RBBP8NLQ8NC74 664 aaPredicted RBP15.68■□□□□ 0.1
CD48-203ENST00000613788 LNX1Q8TBB1 728 aaPredicted RBP15.68■□□□□ 0.1
CD48-203ENST00000613788 TMEM176AQ96HP8 235 aa15.68■□□□□ 0.1
CD48-203ENST00000613788 GPR88Q9GZN0 384 aa15.68■□□□□ 0.1
CD48-203ENST00000613788 ZBP1Q9H171 429 aa15.68■□□□□ 0.1
CD48-203ENST00000613788 NGRNQ9NPE2 291 aaKnown RBP15.68■□□□□ 0.1
CD48-203ENST00000613788 TLR9Q9NR96 1032 aa15.68■□□□□ 0.1
CD48-203ENST00000613788 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.68■□□□□ 0.1
CD48-203ENST00000613788 CDH9Q9ULB4 789 aa15.68■□□□□ 0.1
CD48-203ENST00000613788 KIAA1257Q9ULG3 409 aa15.68■□□□□ 0.1
CD48-203ENST00000613788 BACE2Q9Y5Z0 518 aa15.68■□□□□ 0.1
CD48-203ENST00000613788 KIAA1671Q9BY89 1806 aa15.67■□□□□ 0.1
CD48-203ENST00000613788 GBF1Q92538 1859 aa15.67■□□□□ 0.1
CD48-203ENST00000613788 TMEM265A0A087WTH1 108 aa15.67■□□□□ 0.1
CD48-203ENST00000613788 LRRC53A6NM62 1247 aa15.67■□□□□ 0.1
CD48-203ENST00000613788 AKR1B15C9JRZ8 316 aaPredicted RBP15.67■□□□□ 0.1
CD48-203ENST00000613788 C2CD2LO14523 706 aa15.67■□□□□ 0.1
CD48-203ENST00000613788 GRM6O15303 877 aa15.67■□□□□ 0.1
CD48-203ENST00000613788 LPXNO60711 386 aa15.67■□□□□ 0.1
CD48-203ENST00000613788 PAEPP09466 180 aa15.67■□□□□ 0.1
CD48-203ENST00000613788 TSPY1Q01534 308 aa15.67■□□□□ 0.1
CD48-203ENST00000613788 PTK2Q05397 1052 aa15.67■□□□□ 0.1
CD48-203ENST00000613788 SFMBT2Q5VUG0 894 aa15.67■□□□□ 0.1
CD48-203ENST00000613788 SPC24Q8NBT2 197 aa15.67■□□□□ 0.1
CD48-203ENST00000613788 OR8K1Q8NGG5 319 aa15.67■□□□□ 0.1
CD48-203ENST00000613788 MICAL1Q8TDZ2 1067 aa15.67■□□□□ 0.1
CD48-203ENST00000613788 WHAMMQ8TF30 809 aa15.67■□□□□ 0.1
CD48-203ENST00000613788 SYN2Q92777 582 aaPredicted RBP15.67■□□□□ 0.1
CD48-203ENST00000613788 TCF25Q9BQ70 676 aa15.67■□□□□ 0.1
CD48-203ENST00000613788 LMAN2LQ9H0V9 348 aa15.67■□□□□ 0.1
CD48-203ENST00000613788 ZNF576Q9H609 170 aa15.67■□□□□ 0.1
CD48-203ENST00000613788 ENTPD7Q9NQZ7 604 aa15.67■□□□□ 0.1
CD48-203ENST00000613788 MTRRQ9UBK8 725 aa15.67■□□□□ 0.1
CD48-203ENST00000613788 RNF225M0QZC1 329 aaPredicted RBP15.66■□□□□ 0.1
CD48-203ENST00000613788 CYP26A1O43174 497 aa15.66■□□□□ 0.1
CD48-203ENST00000613788 GFPT2O94808 682 aa15.66■□□□□ 0.1
CD48-203ENST00000613788 FERP16591 822 aa15.66■□□□□ 0.1
CD48-203ENST00000613788 PTPN1P18031 435 aaKnown RBP15.66■□□□□ 0.1
CD48-203ENST00000613788 ACAT1P24752 427 aaKnown RBP15.66■□□□□ 0.1
CD48-203ENST00000613788 RAD23BP54727 409 aa15.66■□□□□ 0.1
CD48-203ENST00000613788 ERVFC1P60507 584 aa15.66■□□□□ 0.1
CD48-203ENST00000613788 SMC1AQ14683 1233 aaKnown RBP15.66■□□□□ 0.1
CD48-203ENST00000613788 PRSS55Q6UWB4 352 aaPredicted RBP15.66■□□□□ 0.1
CD48-203ENST00000613788 ACOT1Q86TX2 421 aa15.66■□□□□ 0.1
CD48-203ENST00000613788 DCP1BQ8IZD4 617 aaKnown RBP15.66■□□□□ 0.1
CD48-203ENST00000613788 HEXIM2Q96MH2 286 aaKnown RBP15.66■□□□□ 0.1
CD48-203ENST00000613788 RTP3Q9BQQ7 232 aa15.66■□□□□ 0.1
CD48-203ENST00000613788 SYT15Q9BQS2 421 aa15.66■□□□□ 0.1
CD48-203ENST00000613788 ELOVL4Q9GZR5 314 aa15.66■□□□□ 0.1
CD48-203ENST00000613788 AIPL1Q9NZN9 384 aa15.66■□□□□ 0.1
CD48-203ENST00000613788 FNIP2Q9P278 1114 aa15.66■□□□□ 0.1
CD48-203ENST00000613788 HMGXB4Q9UGU5 601 aa15.66■□□□□ 0.1
CD48-203ENST00000613788 IRAK3Q9Y616 596 aa15.66■□□□□ 0.1
CD48-203ENST00000613788 TBC1D4O60343 1298 aa15.65■□□□□ 0.1
CD48-203ENST00000613788 MFAP3LO75121 409 aa15.65■□□□□ 0.1
CD48-203ENST00000613788 PNMA6AP0CW24 399 aaPredicted RBP15.65■□□□□ 0.1
CD48-203ENST00000613788 DNAJB1P25685 340 aa15.65■□□□□ 0.1
CD48-203ENST00000613788 CA8P35219 290 aa15.65■□□□□ 0.1
CD48-203ENST00000613788 CLCN1P35523 988 aa15.65■□□□□ 0.1
CD48-203ENST00000613788 ZNF132P52740 706 aa15.65■□□□□ 0.1
CD48-203ENST00000613788 ADKP55263 362 aaKnown RBP15.65■□□□□ 0.1
CD48-203ENST00000613788 SMARCB1Q12824 385 aa15.65■□□□□ 0.1
CD48-203ENST00000613788 PTPN14Q15678 1187 aa15.65■□□□□ 0.1
CD48-203ENST00000613788 MAPRE1Q15691 268 aaKnown RBP15.65■□□□□ 0.1
CD48-203ENST00000613788 ASIC2Q16515 512 aa15.65■□□□□ 0.1
CD48-203ENST00000613788 INTS6LQ5JSJ4 861 aaKnown RBP15.65■□□□□ 0.1
CD48-203ENST00000613788 MRPL43Q8N983 215 aaKnown RBP15.65■□□□□ 0.1
CD48-203ENST00000613788 SLC4A11Q8NBS3 891 aa15.65■□□□□ 0.1
CD48-203ENST00000613788 B3GALNT2Q8NCR0 500 aa15.65■□□□□ 0.1
CD48-203ENST00000613788 TWNKQ96RR1 684 aa15.65■□□□□ 0.1
CD48-203ENST00000613788 RXFP1Q9HBX9 757 aa15.65■□□□□ 0.1
CD48-203ENST00000613788 ZNHIT6Q9NWK9 470 aaKnown RBP15.65■□□□□ 0.1
CD48-203ENST00000613788 NME7Q9Y5B8 376 aa15.65■□□□□ 0.1
CD48-203ENST00000613788 NLRC5Q86WI3 1866 aa15.65■□□□□ 0.1
CD48-203ENST00000613788 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.64■□□□□ 0.09
CD48-203ENST00000613788 LILRB3O75022 631 aa15.64■□□□□ 0.09
CD48-203ENST00000613788 VDRP11473 427 aa15.64■□□□□ 0.09
CD48-203ENST00000613788 CD19P15391 556 aa15.64■□□□□ 0.09
CD48-203ENST00000613788 ARID5AQ03989 594 aa15.64■□□□□ 0.09
CD48-203ENST00000613788 ORC1Q13415 861 aa15.64■□□□□ 0.09
CD48-203ENST00000613788 PTPROQ16827 1216 aa15.64■□□□□ 0.09
CD48-203ENST00000613788 SLC8B1Q6J4K2 584 aa15.64■□□□□ 0.09
CD48-203ENST00000613788 OR10T2Q8NGX3 314 aa15.64■□□□□ 0.09
CD48-203ENST00000613788 AUTS2Q8WXX7 1259 aa15.64■□□□□ 0.09
CD48-203ENST00000613788 DNAJC7Q99615 494 aa15.64■□□□□ 0.09
CD48-203ENST00000613788 EMILIN2Q9BXX0 1053 aa15.64■□□□□ 0.09
CD48-203ENST00000613788 ZCWPW1Q9H0M4 648 aa15.64■□□□□ 0.09
CD48-203ENST00000613788 DPEP3Q9H4B8 488 aa15.64■□□□□ 0.09
CD48-203ENST00000613788 GTF3C4Q9UKN8 822 aa15.64■□□□□ 0.09
CD48-203ENST00000613788 CDY1Q9Y6F8 540 aa15.64■□□□□ 0.09
CD48-203ENST00000613788 FSCN2O14926 492 aa15.63■□□□□ 0.09
CD48-203ENST00000613788 MED7O43513 233 aa15.63■□□□□ 0.09
CD48-203ENST00000613788 HCRTO43612 131 aa15.63■□□□□ 0.09
CD48-203ENST00000613788 ATP2C2O75185 946 aa15.63■□□□□ 0.09
CD48-203ENST00000613788 CPB1P15086 417 aa15.63■□□□□ 0.09
CD48-203ENST00000613788 GNA15P30679 374 aa15.63■□□□□ 0.09
CD48-203ENST00000613788 HNRNPH3P31942 346 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms