RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 RRM1P23921 792 aa17.43■□□□□ 0.38
CNOT3-208ENST00000613073 COPS2P61201 443 aa17.43■□□□□ 0.38
CNOT3-208ENST00000613073 BRSK2Q8IWQ3 736 aa17.43■□□□□ 0.38
CNOT3-208ENST00000613073 RNF25Q96BH1 459 aaPredicted RBP17.43■□□□□ 0.38
CNOT3-208ENST00000613073 ANAPC7Q9UJX3 599 aa17.43■□□□□ 0.38
CNOT3-208ENST00000613073 TTC7AQ9ULT0 858 aaPredicted RBP17.43■□□□□ 0.38
CNOT3-208ENST00000613073 FOXO6A8MYZ6 492 aa17.43■□□□□ 0.38
CNOT3-208ENST00000613073 MIF4GDA9UHW6 222 aaKnown RBP17.43■□□□□ 0.38
CNOT3-208ENST00000613073 CD58P19256 250 aa17.43■□□□□ 0.38
CNOT3-208ENST00000613073 GNA15P30679 374 aa17.43■□□□□ 0.38
CNOT3-208ENST00000613073 PEX5P50542 639 aa17.43■□□□□ 0.38
CNOT3-208ENST00000613073 TFAMQ00059 246 aaKnown RBP17.43■□□□□ 0.38
CNOT3-208ENST00000613073 TCEAL1Q15170 157 aa17.43■□□□□ 0.38
CNOT3-208ENST00000613073 ZNF394Q53GI3 561 aa17.43■□□□□ 0.38
CNOT3-208ENST00000613073 DAB2IPQ5VWQ8 1189 aa17.43■□□□□ 0.38
CNOT3-208ENST00000613073 NSRP1Q9H0G5 558 aaKnown RBP17.43■□□□□ 0.38
CNOT3-208ENST00000613073 EPB41L4BQ9H329 900 aa17.43■□□□□ 0.38
CNOT3-208ENST00000613073 DIS3Q9Y2L1 958 aaKnown RBP17.43■□□□□ 0.38
CNOT3-208ENST00000613073 DNAH12Q6ZR08 3092 aa17.42■□□□□ 0.38
CNOT3-208ENST00000613073 A0A1B0GVG6 124 aa17.42■□□□□ 0.38
CNOT3-208ENST00000613073 ASB14A6NK59 587 aa17.42■□□□□ 0.38
CNOT3-208ENST00000613073 BTBD19C9JJ37 291 aa17.42■□□□□ 0.38
CNOT3-208ENST00000613073 MTA2O94776 668 aa17.42■□□□□ 0.38
CNOT3-208ENST00000613073 FESP07332 822 aa17.42■□□□□ 0.38
CNOT3-208ENST00000613073 MYL6P60660 151 aa17.42■□□□□ 0.38
CNOT3-208ENST00000613073 NUGGCQ68CJ6 796 aa17.42■□□□□ 0.38
CNOT3-208ENST00000613073 HOMEZQ8IX15 550 aa17.42■□□□□ 0.38
CNOT3-208ENST00000613073 MCOLN2Q8IZK6 566 aa17.42■□□□□ 0.38
CNOT3-208ENST00000613073 TMEM130Q8N3G9 435 aa17.42■□□□□ 0.38
CNOT3-208ENST00000613073 RBBP8NLQ8NC74 664 aaPredicted RBP17.42■□□□□ 0.38
CNOT3-208ENST00000613073 RPS6KC1Q96S38 1066 aa17.42■□□□□ 0.38
CNOT3-208ENST00000613073 UVRAGQ9P2Y5 699 aa17.42■□□□□ 0.38
CNOT3-208ENST00000613073 H0Y3Z8 333 aa17.42■□□□□ 0.38
CNOT3-208ENST00000613073 OGTO15294 1046 aa17.42■□□□□ 0.38
CNOT3-208ENST00000613073 AHCYL1O43865 530 aa17.42■□□□□ 0.38
CNOT3-208ENST00000613073 HBP1O60381 514 aa17.42■□□□□ 0.38
CNOT3-208ENST00000613073 PYGLP06737 847 aa17.42■□□□□ 0.38
CNOT3-208ENST00000613073 IQCF3P0C7M6 154 aa17.42■□□□□ 0.38
CNOT3-208ENST00000613073 ZNF286BP0CG31 522 aa17.42■□□□□ 0.38
CNOT3-208ENST00000613073 NSFP46459 744 aaKnown RBP17.42■□□□□ 0.38
CNOT3-208ENST00000613073 ZNF568Q3ZCX4 644 aa17.42■□□□□ 0.38
CNOT3-208ENST00000613073 EEF1DP3Q658K8 133 aa17.42■□□□□ 0.38
CNOT3-208ENST00000613073 ANKRD42Q8N9B4 389 aa17.42■□□□□ 0.38
CNOT3-208ENST00000613073 EIF1ADQ8N9N8 165 aaKnown RBP17.42■□□□□ 0.38
CNOT3-208ENST00000613073 FAM81BQ96LP2 452 aa17.42■□□□□ 0.38
CNOT3-208ENST00000613073 IMPG2Q9BZV3 1241 aa17.42■□□□□ 0.38
CNOT3-208ENST00000613073 SLITRK6Q9H5Y7 841 aa17.42■□□□□ 0.38
CNOT3-208ENST00000613073 USP15Q9Y4E8 981 aaPredicted RBP17.42■□□□□ 0.38
CNOT3-208ENST00000613073 CCL15-CCL14A0A0B4J2E2 113 aa17.41■□□□□ 0.38
CNOT3-208ENST00000613073 GOLGA6L10A0A0M3HER8 536 aa17.41■□□□□ 0.38
CNOT3-208ENST00000613073 TCRBV7S2A1N4TA0A589 114 aa17.41■□□□□ 0.38
CNOT3-208ENST00000613073 THAP12O43422 761 aa17.41■□□□□ 0.38
CNOT3-208ENST00000613073 INSRRP14616 1297 aa17.41■□□□□ 0.38
CNOT3-208ENST00000613073 FGFR4P22455 802 aa17.41■□□□□ 0.38
CNOT3-208ENST00000613073 MAPK4P31152 587 aa17.41■□□□□ 0.38
CNOT3-208ENST00000613073 ADCYAP1R1P41586 468 aa17.41■□□□□ 0.38
CNOT3-208ENST00000613073 SSR1P43307 286 aaKnown RBP17.41■□□□□ 0.38
CNOT3-208ENST00000613073 PMS2P54278 862 aa17.41■□□□□ 0.38
CNOT3-208ENST00000613073 BPIFB4P59827 614 aa17.41■□□□□ 0.38
CNOT3-208ENST00000613073 ARHGAP1Q07960 439 aa17.41■□□□□ 0.38
CNOT3-208ENST00000613073 CCL15Q16663 113 aa17.41■□□□□ 0.38
CNOT3-208ENST00000613073 ANO7Q6IWH7 933 aa17.41■□□□□ 0.38
CNOT3-208ENST00000613073 TMEM192Q8IY95 271 aa17.41■□□□□ 0.38
CNOT3-208ENST00000613073 FITM2Q8N6M3 262 aa17.41■□□□□ 0.38
CNOT3-208ENST00000613073 MORC4Q8TE76 937 aa17.41■□□□□ 0.38
CNOT3-208ENST00000613073 TEKT4Q8WW24 435 aa17.41■□□□□ 0.38
CNOT3-208ENST00000613073 CD101Q93033 1021 aa17.41■□□□□ 0.38
CNOT3-208ENST00000613073 NAP1L3Q99457 506 aaPredicted RBP17.41■□□□□ 0.38
CNOT3-208ENST00000613073 C11orf70Q9BRQ4 267 aa17.41■□□□□ 0.38
CNOT3-208ENST00000613073 ERAP1Q9NZ08 941 aa17.41■□□□□ 0.38
CNOT3-208ENST00000613073 ABLIM1O14639 778 aa17.41■□□□□ 0.38
CNOT3-208ENST00000613073 GAS2O43903 313 aaKnown RBP17.41■□□□□ 0.38
CNOT3-208ENST00000613073 LUC7L3O95232 432 aaKnown RBP17.41■□□□□ 0.38
CNOT3-208ENST00000613073 CREB1P16220 341 aa17.41■□□□□ 0.38
CNOT3-208ENST00000613073 EIF3BP55884 814 aaKnown RBP17.41■□□□□ 0.38
CNOT3-208ENST00000613073 ATF7IP2Q5U623 682 aa17.41■□□□□ 0.38
CNOT3-208ENST00000613073 CWF19L1Q69YN2 538 aaKnown RBP17.41■□□□□ 0.38
CNOT3-208ENST00000613073 TAPT1Q6NXT6 567 aa17.41■□□□□ 0.38
CNOT3-208ENST00000613073 SCARA5Q6ZMJ2 495 aa17.41■□□□□ 0.38
CNOT3-208ENST00000613073 ZDHHC14Q8IZN3 488 aa17.41■□□□□ 0.38
CNOT3-208ENST00000613073 GDAP1Q8TB36 358 aa17.41■□□□□ 0.38
CNOT3-208ENST00000613073 AFG1LQ8WV93 481 aa17.41■□□□□ 0.38
CNOT3-208ENST00000613073 C18orf8Q96DM3 657 aa17.41■□□□□ 0.38
CNOT3-208ENST00000613073 LBHD1Q9BQE6 289 aaPredicted RBP17.41■□□□□ 0.38
CNOT3-208ENST00000613073 WNT8AQ9H1J5 351 aa17.41■□□□□ 0.38
CNOT3-208ENST00000613073 SEMA4AQ9H3S1 761 aa17.41■□□□□ 0.38
CNOT3-208ENST00000613073 FAM114A2Q9NRY5 505 aa17.41■□□□□ 0.38
CNOT3-208ENST00000613073 PPFIA2O75334 1257 aa17.4■□□□□ 0.38
CNOT3-208ENST00000613073 PTENP60484 403 aa17.4■□□□□ 0.38
CNOT3-208ENST00000613073 POU5F1Q01860 360 aaKnown RBP17.4■□□□□ 0.38
CNOT3-208ENST00000613073 MCL1Q07820 350 aa17.4■□□□□ 0.38
CNOT3-208ENST00000613073 SEL1L2Q5TEA6 688 aa17.4■□□□□ 0.38
CNOT3-208ENST00000613073 WDR49Q8IV35 697 aa17.4■□□□□ 0.38
CNOT3-208ENST00000613073 SHCBP1Q8NEM2 672 aa17.4■□□□□ 0.38
CNOT3-208ENST00000613073 FBXO25Q8TCJ0 367 aa17.4■□□□□ 0.38
CNOT3-208ENST00000613073 MS4A4AQ96JQ5 239 aa17.4■□□□□ 0.38
CNOT3-208ENST00000613073 RAB17Q9H0T7 212 aa17.4■□□□□ 0.38
CNOT3-208ENST00000613073 C2orf40Q9H1Z8 148 aa17.4■□□□□ 0.38
CNOT3-208ENST00000613073 CPSF3Q9UKF6 684 aaKnown RBP17.4■□□□□ 0.38
CNOT3-208ENST00000613073 G3BP2Q9UN86 482 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms