RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 GNL2Q13823 731 aaKnown RBP18.66■□□□□ 0.58
CSNK1E-215ENST00000612795 ACAP1Q15027 740 aa18.66■□□□□ 0.58
CSNK1E-215ENST00000612795 KRT79Q5XKE5 535 aa18.66■□□□□ 0.58
CSNK1E-215ENST00000612795 RINT1Q6NUQ1 792 aa18.66■□□□□ 0.58
CSNK1E-215ENST00000612795 CC2D1AQ6P1N0 951 aaPredicted RBP18.66■□□□□ 0.58
CSNK1E-215ENST00000612795 CMTM8Q8IZV2 173 aa18.66■□□□□ 0.58
CSNK1E-215ENST00000612795 RPLP0P6Q8NHW5 317 aa18.66■□□□□ 0.58
CSNK1E-215ENST00000612795 SENP8Q96LD8 212 aa18.66■□□□□ 0.58
CSNK1E-215ENST00000612795 FAM83CQ9BQN1 747 aa18.66■□□□□ 0.58
CSNK1E-215ENST00000612795 TIPINQ9BVW5 301 aa18.66■□□□□ 0.58
CSNK1E-215ENST00000612795 SLC46A2Q9BY10 475 aa18.66■□□□□ 0.58
CSNK1E-215ENST00000612795 IL21Q9HBE4 155 aa18.66■□□□□ 0.58
CSNK1E-215ENST00000612795 HELZP42694 1942 aaKnown RBP18.65■□□□□ 0.58
CSNK1E-215ENST00000612795 BCLAF3A2AJT9 711 aaKnown RBP18.65■□□□□ 0.58
CSNK1E-215ENST00000612795 HOXB3P14651 431 aaPredicted RBP18.65■□□□□ 0.58
CSNK1E-215ENST00000612795 CDR1P51861 262 aa18.65■□□□□ 0.58
CSNK1E-215ENST00000612795 RAD51AP2Q09MP3 1159 aa18.65■□□□□ 0.58
CSNK1E-215ENST00000612795 FBXO43Q4G163 708 aa18.65■□□□□ 0.58
CSNK1E-215ENST00000612795 MAB21L3Q8N8X9 362 aa18.65■□□□□ 0.58
CSNK1E-215ENST00000612795 OR10T2Q8NGX3 314 aa18.65■□□□□ 0.58
CSNK1E-215ENST00000612795 ACDQ96AP0 544 aa18.65■□□□□ 0.58
CSNK1E-215ENST00000612795 CHFRQ96EP1 664 aa18.65■□□□□ 0.58
CSNK1E-215ENST00000612795 C8orf76Q96K31 380 aa18.65■□□□□ 0.58
CSNK1E-215ENST00000612795 P2RY13Q9BPV8 354 aa18.65■□□□□ 0.58
CSNK1E-215ENST00000612795 KIF9Q9HAQ2 790 aa18.65■□□□□ 0.58
CSNK1E-215ENST00000612795 TMEM9BQ9NQ34 198 aa18.65■□□□□ 0.58
CSNK1E-215ENST00000612795 KCNG1Q9UIX4 513 aa18.65■□□□□ 0.58
CSNK1E-215ENST00000612795 NOL7Q9UMY1 257 aaKnown RBP18.65■□□□□ 0.58
CSNK1E-215ENST00000612795 CCL26Q9Y258 94 aa18.65■□□□□ 0.58
CSNK1E-215ENST00000612795 OTOL1A6NHN0 477 aaPredicted RBP18.64■□□□□ 0.57
CSNK1E-215ENST00000612795 PPEF2O14830 753 aa18.64■□□□□ 0.57
CSNK1E-215ENST00000612795 ARSAP15289 507 aa18.64■□□□□ 0.57
CSNK1E-215ENST00000612795 TNFSF9P41273 254 aa18.64■□□□□ 0.57
CSNK1E-215ENST00000612795 LILRA4P59901 499 aa18.64■□□□□ 0.57
CSNK1E-215ENST00000612795 PSMD2Q13200 908 aa18.64■□□□□ 0.57
CSNK1E-215ENST00000612795 PDIA5Q14554 519 aa18.64■□□□□ 0.57
CSNK1E-215ENST00000612795 ZBTB6Q15916 424 aa18.64■□□□□ 0.57
CSNK1E-215ENST00000612795 C1orf186Q6ZWK4 172 aa18.64■□□□□ 0.57
CSNK1E-215ENST00000612795 SYT13Q7L8C5 426 aa18.64■□□□□ 0.57
CSNK1E-215ENST00000612795 TMEM161BQ8NDZ6 487 aa18.64■□□□□ 0.57
CSNK1E-215ENST00000612795 GIPC2Q8TF65 315 aa18.64■□□□□ 0.57
CSNK1E-215ENST00000612795 SPIRE2Q8WWL2 714 aa18.64■□□□□ 0.57
CSNK1E-215ENST00000612795 NTPCRQ9BSD7 190 aaKnown RBP18.64■□□□□ 0.57
CSNK1E-215ENST00000612795 FOXP1Q9H334 677 aaPredicted RBP18.64■□□□□ 0.57
CSNK1E-215ENST00000612795 ZFYVE26Q68DK2 2539 aa18.64■□□□□ 0.57
CSNK1E-215ENST00000612795 LACTBL1A8MY62 500 aa18.63■□□□□ 0.57
CSNK1E-215ENST00000612795 KHNYNO15037 678 aaKnown RBP18.63■□□□□ 0.57
CSNK1E-215ENST00000612795 MAPTP10636 758 aaKnown RBP18.63■□□□□ 0.57
CSNK1E-215ENST00000612795 PLS3P13797 630 aa18.63■□□□□ 0.57
CSNK1E-215ENST00000612795 GUCY2CP25092 1073 aa18.63■□□□□ 0.57
CSNK1E-215ENST00000612795 DDX6P26196 483 aaKnown RBP eCLIP18.63■□□□□ 0.57
CSNK1E-215ENST00000612795 U2AF2P26368 475 aaKnown RBP eCLIP18.63■□□□□ 0.57
CSNK1E-215ENST00000612795 NMT1P30419 496 aaKnown RBP18.63■□□□□ 0.57
CSNK1E-215ENST00000612795 DGKEP52429 567 aa18.63■□□□□ 0.57
CSNK1E-215ENST00000612795 ANAPC15P60006 121 aa18.63■□□□□ 0.57
CSNK1E-215ENST00000612795 DMC1Q14565 340 aa18.63■□□□□ 0.57
CSNK1E-215ENST00000612795 NBR1Q14596 966 aa18.63■□□□□ 0.57
CSNK1E-215ENST00000612795 KYAT1Q16773 422 aa18.63■□□□□ 0.57
CSNK1E-215ENST00000612795 CPA6Q8N4T0 437 aa18.63■□□□□ 0.57
CSNK1E-215ENST00000612795 IGSF22Q8N9C0 903 aa18.63■□□□□ 0.57
CSNK1E-215ENST00000612795 ZCCHC14Q8WYQ9 949 aaKnown RBP18.63■□□□□ 0.57
CSNK1E-215ENST00000612795 USP13Q92995 863 aaPredicted RBP18.63■□□□□ 0.57
CSNK1E-215ENST00000612795 FAM212AQ96EL1 285 aa18.63■□□□□ 0.57
CSNK1E-215ENST00000612795 HAPLN2Q9GZV7 340 aa18.63■□□□□ 0.57
CSNK1E-215ENST00000612795 ZCWPW1Q9H0M4 648 aa18.63■□□□□ 0.57
CSNK1E-215ENST00000612795 RPF1Q9H9Y2 349 aaKnown RBP18.63■□□□□ 0.57
CSNK1E-215ENST00000612795 TDP1Q9NUW8 608 aa18.63■□□□□ 0.57
CSNK1E-215ENST00000612795 PTPRDP23468 1912 aa18.62■□□□□ 0.57
CSNK1E-215ENST00000612795 ASCC3Q8N3C0 2202 aaKnown RBP18.62■□□□□ 0.57
CSNK1E-215ENST00000612795 SPEGQ15772 3267 aa18.62■□□□□ 0.57
CSNK1E-215ENST00000612795 PP2D1A8MPX8 630 aa18.62■□□□□ 0.57
CSNK1E-215ENST00000612795 CEACAM1P13688 526 aa18.62■□□□□ 0.57
CSNK1E-215ENST00000612795 PAX3P23760 479 aa18.62■□□□□ 0.57
CSNK1E-215ENST00000612795 TRAPPC10P48553 1259 aa18.62■□□□□ 0.57
CSNK1E-215ENST00000612795 LIG4P49917 911 aa18.62■□□□□ 0.57
CSNK1E-215ENST00000612795 GALK1P51570 392 aa18.62■□□□□ 0.57
CSNK1E-215ENST00000612795 PDGFRLQ15198 375 aa18.62■□□□□ 0.57
CSNK1E-215ENST00000612795 ZRSR1Q15695 479 aaKnown RBP18.62■□□□□ 0.57
CSNK1E-215ENST00000612795 C11orf74Q86VG3 221 aa18.62■□□□□ 0.57
CSNK1E-215ENST00000612795 METTL23Q86XA0 190 aa18.62■□□□□ 0.57
CSNK1E-215ENST00000612795 TTC16Q8NEE8 873 aa18.62■□□□□ 0.57
CSNK1E-215ENST00000612795 SPPL2BQ8TCT7 592 aa18.62■□□□□ 0.57
CSNK1E-215ENST00000612795 C2orf15Q8WU43 125 aaKnown RBP18.62■□□□□ 0.57
CSNK1E-215ENST00000612795 TSPAN18Q96SJ8 248 aa18.62■□□□□ 0.57
CSNK1E-215ENST00000612795 SCNM1Q9BWG6 230 aa18.62■□□□□ 0.57
CSNK1E-215ENST00000612795 TMEM121BQ9BXQ6 578 aaPredicted RBP18.62■□□□□ 0.57
CSNK1E-215ENST00000612795 FBRSL1Q9HCM7 1045 aaKnown RBP18.62■□□□□ 0.57
CSNK1E-215ENST00000612795 ABI2Q9NYB9 513 aaPredicted RBP18.62■□□□□ 0.57
CSNK1E-215ENST00000612795 EBF1Q9UH73 591 aa18.62■□□□□ 0.57
CSNK1E-215ENST00000612795 TNRC6BQ9UPQ9 1833 aaKnown RBP18.62■□□□□ 0.57
CSNK1E-215ENST00000612795 ANAPC1Q9H1A4 1944 aa18.62■□□□□ 0.57
CSNK1E-215ENST00000612795 H0YCG3 227 aa18.61■□□□□ 0.57
CSNK1E-215ENST00000612795 HNRNPDLO14979 420 aaKnown RBP18.61■□□□□ 0.57
CSNK1E-215ENST00000612795 TOP3BO95985 862 aaKnown RBP18.61■□□□□ 0.57
CSNK1E-215ENST00000612795 CSRP1P21291 193 aaKnown RBP18.61■□□□□ 0.57
CSNK1E-215ENST00000612795 GJA4P35212 333 aa18.61■□□□□ 0.57
CSNK1E-215ENST00000612795 NLRP12P59046 1061 aa18.61■□□□□ 0.57
CSNK1E-215ENST00000612795 ENOX2Q16206 610 aaKnown RBP18.61■□□□□ 0.57
CSNK1E-215ENST00000612795 UAP1L1Q3KQV9 507 aa18.61■□□□□ 0.57
CSNK1E-215ENST00000612795 SPATA1Q5VX52 437 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms