RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 ZNF668Q96K58 619 aaPredicted RBP15.56■□□□□ 0.08
CDH1-213ENST00000612417 CGRRF1Q99675 332 aa15.56■□□□□ 0.08
CDH1-213ENST00000612417 TARS2Q9BW92 718 aaKnown RBP15.56■□□□□ 0.08
CDH1-213ENST00000612417 TMEM134Q9H6X4 195 aa15.56■□□□□ 0.08
CDH1-213ENST00000612417 APOBEC3GQ9HC16 384 aaKnown RBP15.56■□□□□ 0.08
CDH1-213ENST00000612417 RBAKQ9NYW8 714 aaPredicted RBP15.56■□□□□ 0.08
CDH1-213ENST00000612417 ANKFY1Q9P2R3 1169 aa15.56■□□□□ 0.08
CDH1-213ENST00000612417 A0A0B4J269 797 aa15.55■□□□□ 0.08
CDH1-213ENST00000612417 IGKV6-21A0A0C4DH24 114 aa15.55■□□□□ 0.08
CDH1-213ENST00000612417 H3BRB1 525 aa15.55■□□□□ 0.08
CDH1-213ENST00000612417 DYNC1LI2O43237 492 aaPredicted RBP15.55■□□□□ 0.08
CDH1-213ENST00000612417 GJB1P08034 283 aa15.55■□□□□ 0.08
CDH1-213ENST00000612417 CLTAP09496 248 aa15.55■□□□□ 0.08
CDH1-213ENST00000612417 RALAP11233 206 aa15.55■□□□□ 0.08
CDH1-213ENST00000612417 CHKAP35790 457 aa15.55■□□□□ 0.08
CDH1-213ENST00000612417 ACOT2P49753 483 aa15.55■□□□□ 0.08
CDH1-213ENST00000612417 CLCN3P51790 818 aa15.55■□□□□ 0.08
CDH1-213ENST00000612417 DGKDQ16760 1214 aa15.55■□□□□ 0.08
CDH1-213ENST00000612417 SWT1Q5T5J6 900 aaKnown RBP15.55■□□□□ 0.08
CDH1-213ENST00000612417 SPOPLQ6IQ16 392 aa15.55■□□□□ 0.08
CDH1-213ENST00000612417 BBOF1Q8ND07 529 aa15.55■□□□□ 0.08
CDH1-213ENST00000612417 EXD1Q8NHP7 514 aa15.55■□□□□ 0.08
CDH1-213ENST00000612417 ZBTB45Q96K62 511 aaPredicted RBP15.55■□□□□ 0.08
CDH1-213ENST00000612417 NLRP4Q96MN2 994 aa15.55■□□□□ 0.08
CDH1-213ENST00000612417 PRMT1Q99873 361 aaKnown RBP15.55■□□□□ 0.08
CDH1-213ENST00000612417 TUT1Q9H6E5 874 aaKnown RBP15.55■□□□□ 0.08
CDH1-213ENST00000612417 ADAM22Q9P0K1 906 aa15.55■□□□□ 0.08
CDH1-213ENST00000612417 R3HDM2Q9Y2K5 976 aaKnown RBP15.55■□□□□ 0.08
CDH1-213ENST00000612417 PCNTO95613 3336 aa15.55■□□□□ 0.08
CDH1-213ENST00000612417 KIF3CO14782 793 aa15.55■□□□□ 0.08
CDH1-213ENST00000612417 ADCY6O43306 1168 aa15.55■□□□□ 0.08
CDH1-213ENST00000612417 ACSL3O95573 720 aa15.55■□□□□ 0.08
CDH1-213ENST00000612417 MMP3P08254 477 aa15.55■□□□□ 0.08
CDH1-213ENST00000612417 GNA15P30679 374 aa15.55■□□□□ 0.08
CDH1-213ENST00000612417 SCTRP47872 440 aa15.55■□□□□ 0.08
CDH1-213ENST00000612417 TM4SF4P48230 202 aa15.55■□□□□ 0.08
CDH1-213ENST00000612417 TFDP1Q14186 410 aa15.55■□□□□ 0.08
CDH1-213ENST00000612417 LLGL1Q15334 1064 aa15.55■□□□□ 0.08
CDH1-213ENST00000612417 LONRF1Q17RB8 773 aa15.55■□□□□ 0.08
CDH1-213ENST00000612417 CYP4F22Q6NT55 531 aa15.55■□□□□ 0.08
CDH1-213ENST00000612417 LLGL2Q6P1M3 1020 aa15.55■□□□□ 0.08
CDH1-213ENST00000612417 LRRC34Q8IZ02 419 aa15.55■□□□□ 0.08
CDH1-213ENST00000612417 CCDC89Q8N998 374 aa15.55■□□□□ 0.08
CDH1-213ENST00000612417 CCDC114Q96M63 670 aa15.55■□□□□ 0.08
CDH1-213ENST00000612417 C11orf70Q9BRQ4 267 aa15.55■□□□□ 0.08
CDH1-213ENST00000612417 C16orf70Q9BSU1 422 aa15.55■□□□□ 0.08
CDH1-213ENST00000612417 MSTO1Q9BUK6 570 aa15.55■□□□□ 0.08
CDH1-213ENST00000612417 NSRP1Q9H0G5 558 aaKnown RBP15.55■□□□□ 0.08
CDH1-213ENST00000612417 PCDHB4Q9Y5E5 795 aa15.55■□□□□ 0.08
CDH1-213ENST00000612417 CCT8L1PA6NM43 557 aa15.54■□□□□ 0.08
CDH1-213ENST00000612417 HOXC6P09630 235 aa15.54■□□□□ 0.08
CDH1-213ENST00000612417 HARSP12081 509 aaKnown RBP15.54■□□□□ 0.08
CDH1-213ENST00000612417 ZNF132P52740 706 aa15.54■□□□□ 0.08
CDH1-213ENST00000612417 TAS2R40P59535 323 aa15.54■□□□□ 0.08
CDH1-213ENST00000612417 NOP14P78316 857 aaKnown RBP15.54■□□□□ 0.08
CDH1-213ENST00000612417 TMEM270Q6UE05 265 aa15.54■□□□□ 0.08
CDH1-213ENST00000612417 ARHGEF2Q92974 986 aaKnown RBP15.54■□□□□ 0.08
CDH1-213ENST00000612417 OSBPL8Q9BZF1 889 aa15.54■□□□□ 0.08
CDH1-213ENST00000612417 FOXP3Q9BZS1 431 aa15.54■□□□□ 0.08
CDH1-213ENST00000612417 C2orf40Q9H1Z8 148 aa15.54■□□□□ 0.08
CDH1-213ENST00000612417 SAMD15Q9P1V8 674 aa15.54■□□□□ 0.08
CDH1-213ENST00000612417 LGALS13Q9UHV8 139 aa15.54■□□□□ 0.08
CDH1-213ENST00000612417 ANAPC5Q9UJX4 755 aa15.54■□□□□ 0.08
CDH1-213ENST00000612417 CNTNAP2Q9UHC6 1331 aa15.54■□□□□ 0.08
CDH1-213ENST00000612417 CA12O43570 354 aa15.53■□□□□ 0.08
CDH1-213ENST00000612417 DNAJC8O75937 253 aaPredicted RBP15.53■□□□□ 0.08
CDH1-213ENST00000612417 C22orf31O95567 290 aa15.53■□□□□ 0.08
CDH1-213ENST00000612417 CFHP08603 1231 aa15.53■□□□□ 0.08
CDH1-213ENST00000612417 ADCY8P40145 1251 aa15.53■□□□□ 0.08
CDH1-213ENST00000612417 XRCC4Q13426 336 aa15.53■□□□□ 0.08
CDH1-213ENST00000612417 MAPK6Q16659 721 aa15.53■□□□□ 0.08
CDH1-213ENST00000612417 TMEM132AQ24JP5 1023 aa15.53■□□□□ 0.08
CDH1-213ENST00000612417 C2CD6Q53TS8 623 aa15.53■□□□□ 0.08
CDH1-213ENST00000612417 CCDC50Q8IVM0 306 aa15.53■□□□□ 0.08
CDH1-213ENST00000612417 UBR7Q8N806 425 aa15.53■□□□□ 0.08
CDH1-213ENST00000612417 RBBP8NLQ8NC74 664 aaPredicted RBP15.53■□□□□ 0.08
CDH1-213ENST00000612417 SOCS4Q8WXH5 440 aa15.53■□□□□ 0.08
CDH1-213ENST00000612417 USP6NLQ92738 828 aa15.53■□□□□ 0.08
CDH1-213ENST00000612417 SCLT1Q96NL6 688 aa15.53■□□□□ 0.08
CDH1-213ENST00000612417 APBA2Q99767 749 aa15.53■□□□□ 0.08
CDH1-213ENST00000612417 TCHPQ9BT92 498 aa15.53■□□□□ 0.08
CDH1-213ENST00000612417 MRPL4Q9BYD3 311 aaKnown RBP15.53■□□□□ 0.08
CDH1-213ENST00000612417 SLC40A1Q9NP59 571 aa15.53■□□□□ 0.08
CDH1-213ENST00000612417 O00370 1275 aa15.53■□□□□ 0.08
CDH1-213ENST00000612417 MAGEB2O15479 319 aa15.53■□□□□ 0.08
CDH1-213ENST00000612417 PRKCBP05771 671 aa15.53■□□□□ 0.08
CDH1-213ENST00000612417 GSTA1P08263 222 aa15.53■□□□□ 0.08
CDH1-213ENST00000612417 SMYD5Q6GMV2 418 aa15.53■□□□□ 0.08
CDH1-213ENST00000612417 VSTM1Q6UX27 236 aa15.53■□□□□ 0.08
CDH1-213ENST00000612417 CEP128Q6ZU80 1094 aa15.53■□□□□ 0.08
CDH1-213ENST00000612417 LENG1Q96BZ8 264 aaPredicted RBP15.53■□□□□ 0.08
CDH1-213ENST00000612417 MYCBPQ99417 103 aaPredicted RBP15.53■□□□□ 0.08
CDH1-213ENST00000612417 KLC4Q9NSK0 619 aa15.53■□□□□ 0.08
CDH1-213ENST00000612417 PARVAQ9NVD7 372 aa15.53■□□□□ 0.08
CDH1-213ENST00000612417 NINJ2Q9NZG7 142 aa15.53■□□□□ 0.08
CDH1-213ENST00000612417 GJD2Q9UKL4 321 aa15.53■□□□□ 0.08
CDH1-213ENST00000612417 AKT3Q9Y243 479 aa15.53■□□□□ 0.08
CDH1-213ENST00000612417 MGAMO43451 1857 aa15.52■□□□□ 0.08
CDH1-213ENST00000612417 INO80B-WBP1J3KQ70 363 aa15.52■□□□□ 0.08
CDH1-213ENST00000612417 TLR3O15455 904 aaKnown RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms