RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 GPR88Q9GZN0 384 aa28.02■■■□□ 2.08
PNKP-216ENST00000601816 GDAP2Q9NXN4 497 aa28.02■■■□□ 2.08
PNKP-216ENST00000601816 ABI2Q9NYB9 513 aaPredicted RBP28.02■■■□□ 2.08
PNKP-216ENST00000601816 USP25Q9UHP3 1055 aa28.02■■■□□ 2.08
PNKP-216ENST00000601816 SIT1Q9Y3P8 196 aa28.02■■■□□ 2.08
PNKP-216ENST00000601816 SNX9Q9Y5X1 595 aa28.02■■■□□ 2.08
PNKP-216ENST00000601816 A0A1B0GVL5 298 aa28.01■■■□□ 2.07
PNKP-216ENST00000601816 CLIC2O15247 247 aa28.01■■■□□ 2.07
PNKP-216ENST00000601816 MYO1EQ12965 1108 aa28.01■■■□□ 2.07
PNKP-216ENST00000601816 WDR49Q8IV35 697 aa28.01■■■□□ 2.07
PNKP-216ENST00000601816 XXYLT1Q8NBI6 393 aa28.01■■■□□ 2.07
PNKP-216ENST00000601816 RDH13Q8NBN7 331 aa28.01■■■□□ 2.07
PNKP-216ENST00000601816 ZSCAN18Q8TBC5 510 aaPredicted RBP28.01■■■□□ 2.07
PNKP-216ENST00000601816 PAGE5Q96GU1 130 aa28.01■■■□□ 2.07
PNKP-216ENST00000601816 ZNF334Q9HCZ1 680 aaPredicted RBP28.01■■■□□ 2.07
PNKP-216ENST00000601816 ATP6V1DQ9Y5K8 247 aa28.01■■■□□ 2.07
PNKP-216ENST00000601816 CACNA1HO95180 2353 aa28■■■□□ 2.07
PNKP-216ENST00000601816 FGF19O95750 216 aa28■■■□□ 2.07
PNKP-216ENST00000601816 GRM2Q14416 872 aa28■■■□□ 2.07
PNKP-216ENST00000601816 TOP6BLQ8N6T0 577 aa28■■■□□ 2.07
PNKP-216ENST00000601816 LPIN3Q9BQK8 851 aa28■■■□□ 2.07
PNKP-216ENST00000601816 FOXQ1Q9C009 403 aa28■■■□□ 2.07
PNKP-216ENST00000601816 EXOC1Q9NV70 894 aa28■■■□□ 2.07
PNKP-216ENST00000601816 DDX43Q9NXZ2 648 aaKnown RBP28■■■□□ 2.07
PNKP-216ENST00000601816 CGNQ9P2M7 1197 aaKnown RBP28■■■□□ 2.07
PNKP-216ENST00000601816 PCDHB5Q9Y5E4 795 aa28■■■□□ 2.07
PNKP-216ENST00000601816 DCNP07585 359 aaKnown RBP27.99■■■□□ 2.07
PNKP-216ENST00000601816 HAPLN1P10915 354 aaPredicted RBP27.99■■■□□ 2.07
PNKP-216ENST00000601816 ATF6P18850 670 aa27.99■■■□□ 2.07
PNKP-216ENST00000601816 MYL7Q01449 175 aa27.99■■■□□ 2.07
PNKP-216ENST00000601816 KNOP1Q1ED39 458 aaKnown RBP27.99■■■□□ 2.07
PNKP-216ENST00000601816 ADGRF2Q8IZF7 708 aa27.99■■■□□ 2.07
PNKP-216ENST00000601816 PJA1Q8NG27 643 aa27.99■■■□□ 2.07
PNKP-216ENST00000601816 SPATA18Q8TC71 538 aa27.99■■■□□ 2.07
PNKP-216ENST00000601816 HPDLQ96IR7 371 aa27.99■■■□□ 2.07
PNKP-216ENST00000601816 FNBP1Q96RU3 617 aa27.99■■■□□ 2.07
PNKP-216ENST00000601816 ACBD6Q9BR61 282 aa27.99■■■□□ 2.07
PNKP-216ENST00000601816 TRMT61BQ9BVS5 477 aaKnown RBP27.99■■■□□ 2.07
PNKP-216ENST00000601816 TRPV4Q9HBA0 871 aa27.99■■■□□ 2.07
PNKP-216ENST00000601816 HPSEQ9Y251 543 aa27.99■■■□□ 2.07
PNKP-216ENST00000601816 KANSL1LA0AUZ9 987 aa27.98■■■□□ 2.07
PNKP-216ENST00000601816 KLRC4O43908 158 aa27.98■■■□□ 2.07
PNKP-216ENST00000601816 DLATP10515 647 aaKnown RBP27.98■■■□□ 2.07
PNKP-216ENST00000601816 GABRR2P28476 465 aa27.98■■■□□ 2.07
PNKP-216ENST00000601816 CYP24A1Q07973 514 aa27.98■■■□□ 2.07
PNKP-216ENST00000601816 PSMD6Q15008 389 aa27.98■■■□□ 2.07
PNKP-216ENST00000601816 TAF12Q16514 161 aa27.98■■■□□ 2.07
PNKP-216ENST00000601816 NFE2Q16621 373 aaPredicted RBP27.98■■■□□ 2.07
PNKP-216ENST00000601816 C12orf56Q8IXR9 622 aa27.98■■■□□ 2.07
PNKP-216ENST00000601816 DEPDC1BQ8WUY9 529 aa27.98■■■□□ 2.07
PNKP-216ENST00000601816 DNASE1L2Q92874 299 aa27.98■■■□□ 2.07
PNKP-216ENST00000601816 DDX23Q9BUQ8 820 aaKnown RBP27.98■■■□□ 2.07
PNKP-216ENST00000601816 ATXN3LQ9H3M9 355 aa27.98■■■□□ 2.07
PNKP-216ENST00000601816 BRD9Q9H8M2 597 aa27.98■■■□□ 2.07
PNKP-216ENST00000601816 TMLHEQ9NVH6 421 aa27.98■■■□□ 2.07
PNKP-216ENST00000601816 PRPF40AO75400 957 aaKnown RBP27.97■■■□□ 2.07
PNKP-216ENST00000601816 ACAT1P24752 427 aaKnown RBP27.97■■■□□ 2.07
PNKP-216ENST00000601816 VIPR2P41587 438 aa27.97■■■□□ 2.07
PNKP-216ENST00000601816 ANGPT1Q15389 498 aa27.97■■■□□ 2.07
PNKP-216ENST00000601816 INTS6LQ5JSJ4 861 aaKnown RBP27.97■■■□□ 2.07
PNKP-216ENST00000601816 VITQ6UXI7 678 aa27.97■■■□□ 2.07
PNKP-216ENST00000601816 GAREM2Q75VX8 874 aa27.97■■■□□ 2.07
PNKP-216ENST00000601816 GOLGA5Q8TBA6 731 aa27.97■■■□□ 2.07
PNKP-216ENST00000601816 GIPC2Q8TF65 315 aa27.97■■■□□ 2.07
PNKP-216ENST00000601816 CCDC127Q96BQ5 260 aa27.97■■■□□ 2.07
PNKP-216ENST00000601816 GCNAQ96QF7 691 aa27.97■■■□□ 2.07
PNKP-216ENST00000601816 CGRRF1Q99675 332 aa27.97■■■□□ 2.07
PNKP-216ENST00000601816 SCAND2PQ9GZW5 306 aaPredicted RBP27.97■■■□□ 2.07
PNKP-216ENST00000601816 MYL1P05976 194 aa27.96■■■□□ 2.07
PNKP-216ENST00000601816 PSMC3P17980 439 aa27.96■■■□□ 2.07
PNKP-216ENST00000601816 TNNI1P19237 187 aa27.96■■■□□ 2.07
PNKP-216ENST00000601816 PCSK1P29120 753 aa27.96■■■□□ 2.07
PNKP-216ENST00000601816 SYKP43405 635 aa27.96■■■□□ 2.07
PNKP-216ENST00000601816 LHX1P48742 406 aa27.96■■■□□ 2.07
PNKP-216ENST00000601816 PSMD2Q13200 908 aa27.96■■■□□ 2.07
PNKP-216ENST00000601816 KMT5BQ4FZB7 885 aa27.96■■■□□ 2.07
PNKP-216ENST00000601816 ARHGAP15Q53QZ3 475 aa27.96■■■□□ 2.07
PNKP-216ENST00000601816 STXBP5Q5T5C0 1151 aa27.96■■■□□ 2.07
PNKP-216ENST00000601816 TPRG1Q6ZUI0 275 aa27.96■■■□□ 2.07
PNKP-216ENST00000601816 DPH6Q7L8W6 267 aa27.96■■■□□ 2.07
PNKP-216ENST00000601816 TRAPPC11Q7Z392 1133 aa27.96■■■□□ 2.07
PNKP-216ENST00000601816 OSTM1Q86WC4 334 aa27.96■■■□□ 2.07
PNKP-216ENST00000601816 E2F7Q96AV8 911 aa27.96■■■□□ 2.07
PNKP-216ENST00000601816 DLGAP2Q9P1A6 1054 aa27.96■■■□□ 2.07
PNKP-216ENST00000601816 GDI1P31150 447 aa27.95■■■□□ 2.06
PNKP-216ENST00000601816 STK4Q13043 487 aa27.95■■■□□ 2.06
PNKP-216ENST00000601816 UBXN2BQ14CS0 331 aa27.95■■■□□ 2.06
PNKP-216ENST00000601816 SOWAHAQ2M3V2 549 aa27.95■■■□□ 2.06
PNKP-216ENST00000601816 GPR158Q5T848 1215 aa27.95■■■□□ 2.06
PNKP-216ENST00000601816 KIAA0895Q8NCT3 520 aa27.95■■■□□ 2.06
PNKP-216ENST00000601816 IRF7Q92985 503 aa27.95■■■□□ 2.06
PNKP-216ENST00000601816 PI4K2AQ9BTU6 479 aa27.95■■■□□ 2.06
PNKP-216ENST00000601816 HEBP1Q9NRV9 189 aa27.95■■■□□ 2.06
PNKP-216ENST00000601816 COL4A3Q01955 1670 aa27.94■■■□□ 2.06
PNKP-216ENST00000601816 FAM237AA0A1B0GTK4 181 aa27.94■■■□□ 2.06
PNKP-216ENST00000601816 HEPACAM2A8MVW5 462 aa27.94■■■□□ 2.06
PNKP-216ENST00000601816 GABRDO14764 452 aa27.94■■■□□ 2.06
PNKP-216ENST00000601816 EXOC3O60645 756 aa27.94■■■□□ 2.06
PNKP-216ENST00000601816 CDC25CP30307 473 aa27.94■■■□□ 2.06
PNKP-216ENST00000601816 NDUFA8P51970 172 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms