RNA–Protein interactions for RNA: ENST00000601609.1

PPFIA4-213, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-213ENST00000601609 PARD3BQ8TEW8 1205 aa17.02■□□□□ 0.32
PPFIA4-213ENST00000601609 NXPE3Q969Y0 559 aa17.02■□□□□ 0.32
PPFIA4-213ENST00000601609 SYAP1Q96A49 352 aaPredicted RBP17.02■□□□□ 0.32
PPFIA4-213ENST00000601609 GSDMAQ96QA5 445 aa17.02■□□□□ 0.32
PPFIA4-213ENST00000601609 SNX25Q9H3E2 840 aa17.02■□□□□ 0.32
PPFIA4-213ENST00000601609 SLITRK6Q9H5Y7 841 aa17.02■□□□□ 0.32
PPFIA4-213ENST00000601609 MMRN2Q9H8L6 949 aa17.02■□□□□ 0.32
PPFIA4-213ENST00000601609 NXF1Q9UBU9 619 aaKnown RBP17.02■□□□□ 0.32
PPFIA4-213ENST00000601609 DUSP12Q9UNI6 340 aa17.02■□□□□ 0.32
PPFIA4-213ENST00000601609 DOCK8Q8NF50 2099 aa17.01■□□□□ 0.31
PPFIA4-213ENST00000601609 NARSO43776 548 aaKnown RBP17.01■□□□□ 0.31
PPFIA4-213ENST00000601609 CST3P01034 146 aaPredicted RBP17.01■□□□□ 0.31
PPFIA4-213ENST00000601609 RFX1P22670 979 aa17.01■□□□□ 0.31
PPFIA4-213ENST00000601609 MYL6P60660 151 aa17.01■□□□□ 0.31
PPFIA4-213ENST00000601609 STIM1Q13586 685 aa17.01■□□□□ 0.31
PPFIA4-213ENST00000601609 HTR4Q13639 388 aa17.01■□□□□ 0.31
PPFIA4-213ENST00000601609 NFE2Q16621 373 aaPredicted RBP17.01■□□□□ 0.31
PPFIA4-213ENST00000601609 SOWAHAQ2M3V2 549 aa17.01■□□□□ 0.31
PPFIA4-213ENST00000601609 ZNF699Q32M78 642 aa17.01■□□□□ 0.31
PPFIA4-213ENST00000601609 WDR72Q3MJ13 1102 aa17.01■□□□□ 0.31
PPFIA4-213ENST00000601609 LRRTM3Q86VH5 581 aa17.01■□□□□ 0.31
PPFIA4-213ENST00000601609 SPATA2LQ8IUW3 424 aaPredicted RBP17.01■□□□□ 0.31
PPFIA4-213ENST00000601609 FAM186BQ8IYM0 893 aa17.01■□□□□ 0.31
PPFIA4-213ENST00000601609 SPATA18Q8TC71 538 aa17.01■□□□□ 0.31
PPFIA4-213ENST00000601609 PLEKHO2Q8TD55 490 aa17.01■□□□□ 0.31
PPFIA4-213ENST00000601609 ZNF516Q92618 1163 aa17.01■□□□□ 0.31
PPFIA4-213ENST00000601609 TCEAL4Q96EI5 215 aa17.01■□□□□ 0.31
PPFIA4-213ENST00000601609 GCNAQ96QF7 691 aa17.01■□□□□ 0.31
PPFIA4-213ENST00000601609 LPIN3Q9BQK8 851 aa17.01■□□□□ 0.31
PPFIA4-213ENST00000601609 ACBD6Q9BR61 282 aa17.01■□□□□ 0.31
PPFIA4-213ENST00000601609 PI4K2AQ9BTU6 479 aa17.01■□□□□ 0.31
PPFIA4-213ENST00000601609 RAPGEFL1Q9UHV5 662 aa17.01■□□□□ 0.31
PPFIA4-213ENST00000601609 PCDHA5Q9Y5H7 936 aa17.01■□□□□ 0.31
PPFIA4-213ENST00000601609 HCRTO43612 131 aa17■□□□□ 0.31
PPFIA4-213ENST00000601609 TECTAO75443 2155 aa17■□□□□ 0.31
PPFIA4-213ENST00000601609 CFHP08603 1231 aa17■□□□□ 0.31
PPFIA4-213ENST00000601609 GJA1P17302 382 aa17■□□□□ 0.31
PPFIA4-213ENST00000601609 ATICP31939 592 aa17■□□□□ 0.31
PPFIA4-213ENST00000601609 PIK3CAP42336 1068 aa17■□□□□ 0.31
PPFIA4-213ENST00000601609 VAMP7P51809 220 aa17■□□□□ 0.31
PPFIA4-213ENST00000601609 PSMC1P62191 440 aaKnown RBP17■□□□□ 0.31
PPFIA4-213ENST00000601609 DLG4P78352 724 aa17■□□□□ 0.31
PPFIA4-213ENST00000601609 ADAM9Q13443 819 aa17■□□□□ 0.31
PPFIA4-213ENST00000601609 NCOA4Q13772 614 aa17■□□□□ 0.31
PPFIA4-213ENST00000601609 TDRD10Q5VZ19 366 aaKnown RBP17■□□□□ 0.31
PPFIA4-213ENST00000601609 ISM2Q6H9L7 571 aa17■□□□□ 0.31
PPFIA4-213ENST00000601609 PARM1Q6UWI2 310 aa17■□□□□ 0.31
PPFIA4-213ENST00000601609 SCARA5Q6ZMJ2 495 aa17■□□□□ 0.31
PPFIA4-213ENST00000601609 DPH6Q7L8W6 267 aa17■□□□□ 0.31
PPFIA4-213ENST00000601609 OR6B3Q8NGW1 331 aa17■□□□□ 0.31
PPFIA4-213ENST00000601609 GIPC2Q8TF65 315 aa17■□□□□ 0.31
PPFIA4-213ENST00000601609 KXD1Q9BQD3 176 aa17■□□□□ 0.31
PPFIA4-213ENST00000601609 SYT15Q9BQS2 421 aa17■□□□□ 0.31
PPFIA4-213ENST00000601609 AVENQ9NQS1 362 aaPredicted RBP17■□□□□ 0.31
PPFIA4-213ENST00000601609 TMLHEQ9NVH6 421 aa17■□□□□ 0.31
PPFIA4-213ENST00000601609 HSFX1Q9UBD0 423 aa17■□□□□ 0.31
PPFIA4-213ENST00000601609 ASB3Q9Y575 518 aa17■□□□□ 0.31
PPFIA4-213ENST00000601609 A0A1W2PRU2 124 aa16.99■□□□□ 0.31
PPFIA4-213ENST00000601609 AKAP3O75969 853 aa16.99■□□□□ 0.31
PPFIA4-213ENST00000601609 PDGFRBP09619 1106 aa16.99■□□□□ 0.31
PPFIA4-213ENST00000601609 TRIM49P0CI25 452 aa16.99■□□□□ 0.31
PPFIA4-213ENST00000601609 TRIM49CP0CI26 452 aa16.99■□□□□ 0.31
PPFIA4-213ENST00000601609 HAPLN1P10915 354 aaPredicted RBP16.99■□□□□ 0.31
PPFIA4-213ENST00000601609 EPB41P11171 864 aaKnown RBP16.99■□□□□ 0.31
PPFIA4-213ENST00000601609 PSMC2P35998 433 aaKnown RBP16.99■□□□□ 0.31
PPFIA4-213ENST00000601609 PRCPP42785 496 aa16.99■□□□□ 0.31
PPFIA4-213ENST00000601609 TEAD2Q15562 447 aa16.99■□□□□ 0.31
PPFIA4-213ENST00000601609 NFIL3Q16649 462 aa16.99■□□□□ 0.31
PPFIA4-213ENST00000601609 ZNF667Q5HYK9 610 aa16.99■□□□□ 0.31
PPFIA4-213ENST00000601609 PRSS36Q5K4E3 855 aa16.99■□□□□ 0.31
PPFIA4-213ENST00000601609 INTS8Q75QN2 995 aaKnown RBP16.99■□□□□ 0.31
PPFIA4-213ENST00000601609 SLC44A3Q8N4M1 653 aa16.99■□□□□ 0.31
PPFIA4-213ENST00000601609 TMC2Q8TDI7 906 aa16.99■□□□□ 0.31
PPFIA4-213ENST00000601609 FGF14Q92915 247 aa16.99■□□□□ 0.31
PPFIA4-213ENST00000601609 ASIC4Q96FT7 647 aa16.99■□□□□ 0.31
PPFIA4-213ENST00000601609 GTPBP4Q9BZE4 634 aaKnown RBP16.99■□□□□ 0.31
PPFIA4-213ENST00000601609 GZF1Q9H116 711 aaPredicted RBP16.99■□□□□ 0.31
PPFIA4-213ENST00000601609 DNAJC25Q9H1X3 360 aa16.99■□□□□ 0.31
PPFIA4-213ENST00000601609 GDE1Q9NZC3 331 aa16.99■□□□□ 0.31
PPFIA4-213ENST00000601609 GTF3C4Q9UKN8 822 aa16.99■□□□□ 0.31
PPFIA4-213ENST00000601609 CDH9Q9ULB4 789 aa16.99■□□□□ 0.31
PPFIA4-213ENST00000601609 NOTCH4Q99466 2003 aa16.98■□□□□ 0.31
PPFIA4-213ENST00000601609 ANHXE9PGG2 379 aa16.98■□□□□ 0.31
PPFIA4-213ENST00000601609 CETN3O15182 167 aa16.98■□□□□ 0.31
PPFIA4-213ENST00000601609 SRFP11831 508 aa16.98■□□□□ 0.31
PPFIA4-213ENST00000601609 P4HA1P13674 534 aa16.98■□□□□ 0.31
PPFIA4-213ENST00000601609 ATF6P18850 670 aa16.98■□□□□ 0.31
PPFIA4-213ENST00000601609 WARSP23381 471 aaKnown RBP16.98■□□□□ 0.31
PPFIA4-213ENST00000601609 GABRR2P28476 465 aa16.98■□□□□ 0.31
PPFIA4-213ENST00000601609 CCR2P41597 374 aa16.98■□□□□ 0.31
PPFIA4-213ENST00000601609 UBE2HP62256 183 aa16.98■□□□□ 0.31
PPFIA4-213ENST00000601609 CYP27A1Q02318 531 aa16.98■□□□□ 0.31
PPFIA4-213ENST00000601609 EDRF1Q3B7T1 1238 aa16.98■□□□□ 0.31
PPFIA4-213ENST00000601609 C4orf50Q6ZRC1 276 aa16.98■□□□□ 0.31
PPFIA4-213ENST00000601609 DNAJB7Q7Z6W7 309 aaPredicted RBP16.98■□□□□ 0.31
PPFIA4-213ENST00000601609 FBXL6Q8N531 539 aa16.98■□□□□ 0.31
PPFIA4-213ENST00000601609 FLCNQ8NFG4 579 aa16.98■□□□□ 0.31
PPFIA4-213ENST00000601609 GPR152Q8TDT2 470 aa16.98■□□□□ 0.31
PPFIA4-213ENST00000601609 TMEM174Q8WUU8 243 aa16.98■□□□□ 0.31
PPFIA4-213ENST00000601609 KBTBD7Q8WVZ9 684 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms