RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 DMWDQ09019 674 aa19.42■□□□□ 0.7
CHMP2A-208ENST00000601220 SMARCB1Q12824 385 aa19.42■□□□□ 0.7
CHMP2A-208ENST00000601220 POSTNQ15063 836 aa19.42■□□□□ 0.7
CHMP2A-208ENST00000601220 MGAT5BQ3V5L5 792 aa19.42■□□□□ 0.7
CHMP2A-208ENST00000601220 C1orf228Q6PIY5 440 aa19.42■□□□□ 0.7
CHMP2A-208ENST00000601220 RALGPS2Q86X27 583 aaPredicted RBP19.42■□□□□ 0.7
CHMP2A-208ENST00000601220 METTL23Q86XA0 190 aa19.42■□□□□ 0.7
CHMP2A-208ENST00000601220 THEM5Q8N1Q8 247 aa19.42■□□□□ 0.7
CHMP2A-208ENST00000601220 GPR161Q8N6U8 529 aaKnown RBP19.42■□□□□ 0.7
CHMP2A-208ENST00000601220 TTC8Q8TAM2 541 aa19.42■□□□□ 0.7
CHMP2A-208ENST00000601220 GIPC2Q8TF65 315 aa19.42■□□□□ 0.7
CHMP2A-208ENST00000601220 PARD6AQ9NPB6 346 aa19.42■□□□□ 0.7
CHMP2A-208ENST00000601220 SCN1AP35498 2009 aa19.41■□□□□ 0.7
CHMP2A-208ENST00000601220 FRMD3A2A2Y4 597 aa19.41■□□□□ 0.7
CHMP2A-208ENST00000601220 K7ESF4 209 aa19.41■□□□□ 0.7
CHMP2A-208ENST00000601220 IL18RAPO95256 599 aa19.41■□□□□ 0.7
CHMP2A-208ENST00000601220 F11P03951 625 aa19.41■□□□□ 0.7
CHMP2A-208ENST00000601220 CDC25CP30307 473 aa19.41■□□□□ 0.7
CHMP2A-208ENST00000601220 CASP5P51878 434 aa19.41■□□□□ 0.7
CHMP2A-208ENST00000601220 KPNA1P52294 538 aaPredicted RBP19.41■□□□□ 0.7
CHMP2A-208ENST00000601220 TNK2Q07912 1038 aa19.41■□□□□ 0.7
CHMP2A-208ENST00000601220 ARHGAP15Q53QZ3 475 aa19.41■□□□□ 0.7
CHMP2A-208ENST00000601220 L1TD1Q5T7N2 865 aaKnown RBP19.41■□□□□ 0.7
CHMP2A-208ENST00000601220 RRAGBQ5VZM2 374 aa19.41■□□□□ 0.7
CHMP2A-208ENST00000601220 Q6ZS52 159 aa19.41■□□□□ 0.7
CHMP2A-208ENST00000601220 CELF5Q8N6W0 485 aaKnown RBP19.41■□□□□ 0.7
CHMP2A-208ENST00000601220 FAM200AQ8TCP9 573 aa19.41■□□□□ 0.7
CHMP2A-208ENST00000601220 SPPL2BQ8TCT7 592 aa19.41■□□□□ 0.7
CHMP2A-208ENST00000601220 BPIFB1Q8TDL5 484 aa19.41■□□□□ 0.7
CHMP2A-208ENST00000601220 FGFBP2Q9BYJ0 223 aa19.41■□□□□ 0.7
CHMP2A-208ENST00000601220 SMG9Q9H0W8 520 aaKnown RBP19.41■□□□□ 0.7
CHMP2A-208ENST00000601220 MRPL44Q9H9J2 332 aaKnown RBP19.41■□□□□ 0.7
CHMP2A-208ENST00000601220 TBC1D7Q9P0N9 293 aa19.41■□□□□ 0.7
CHMP2A-208ENST00000601220 CCDC39Q9UFE4 941 aa19.41■□□□□ 0.7
CHMP2A-208ENST00000601220 MORC2Q9Y6X9 1032 aaPredicted RBP19.41■□□□□ 0.7
CHMP2A-208ENST00000601220 ANK1P16157 1881 aa19.4■□□□□ 0.7
CHMP2A-208ENST00000601220 A0A087X0B3 334 aa19.4■□□□□ 0.7
CHMP2A-208ENST00000601220 DPYSL4O14531 572 aa19.4■□□□□ 0.7
CHMP2A-208ENST00000601220 HRO43593 1189 aa19.4■□□□□ 0.7
CHMP2A-208ENST00000601220 GAP43P17677 238 aa19.4■□□□□ 0.7
CHMP2A-208ENST00000601220 CCINQ13939 588 aa19.4■□□□□ 0.7
CHMP2A-208ENST00000601220 PPP2R5DQ14738 602 aa19.4■□□□□ 0.7
CHMP2A-208ENST00000601220 SV2CQ496J9 727 aa19.4■□□□□ 0.7
CHMP2A-208ENST00000601220 DGKKQ5KSL6 1271 aa19.4■□□□□ 0.7
CHMP2A-208ENST00000601220 SV2BQ7L1I2 683 aa19.4■□□□□ 0.7
CHMP2A-208ENST00000601220 BRSK2Q8IWQ3 736 aa19.4■□□□□ 0.7
CHMP2A-208ENST00000601220 C1orf127Q8N9H9 656 aa19.4■□□□□ 0.7
CHMP2A-208ENST00000601220 ACCSQ96QU6 501 aa19.4■□□□□ 0.7
CHMP2A-208ENST00000601220 PKMYT1Q99640 499 aa19.4■□□□□ 0.7
CHMP2A-208ENST00000601220 FAM213AQ9BRX8 229 aa19.4■□□□□ 0.7
CHMP2A-208ENST00000601220 OLFML3Q9NRN5 406 aa19.4■□□□□ 0.7
CHMP2A-208ENST00000601220 PDCP20941 246 aa19.39■□□□□ 0.69
CHMP2A-208ENST00000601220 SYT1P21579 422 aa19.39■□□□□ 0.69
CHMP2A-208ENST00000601220 HOXC13P31276 330 aa19.39■□□□□ 0.69
CHMP2A-208ENST00000601220 GPR15P49685 360 aa19.39■□□□□ 0.69
CHMP2A-208ENST00000601220 PLCB2Q00722 1185 aa19.39■□□□□ 0.69
CHMP2A-208ENST00000601220 LRRC32Q14392 662 aa19.39■□□□□ 0.69
CHMP2A-208ENST00000601220 VEPH1Q14D04 833 aa19.39■□□□□ 0.69
CHMP2A-208ENST00000601220 DCP1BQ8IZD4 617 aaKnown RBP19.39■□□□□ 0.69
CHMP2A-208ENST00000601220 CMTM8Q8IZV2 173 aa19.39■□□□□ 0.69
CHMP2A-208ENST00000601220 PDCL2Q8N4E4 241 aa19.39■□□□□ 0.69
CHMP2A-208ENST00000601220 CHFRQ96EP1 664 aa19.39■□□□□ 0.69
CHMP2A-208ENST00000601220 SAAL1Q96ER3 474 aa19.39■□□□□ 0.69
CHMP2A-208ENST00000601220 FAM84AQ96KN4 292 aa19.39■□□□□ 0.69
CHMP2A-208ENST00000601220 FAM83CQ9BQN1 747 aa19.39■□□□□ 0.69
CHMP2A-208ENST00000601220 ABI2Q9NYB9 513 aaPredicted RBP19.39■□□□□ 0.69
CHMP2A-208ENST00000601220 L1RE1Q9UN81 338 aa19.39■□□□□ 0.69
CHMP2A-208ENST00000601220 EXOC7Q9UPT5 735 aa19.39■□□□□ 0.69
CHMP2A-208ENST00000601220 CHURC1-FNTBB4DL54 471 aa19.38■□□□□ 0.69
CHMP2A-208ENST00000601220 CENPBP07199 599 aaPredicted RBP19.38■□□□□ 0.69
CHMP2A-208ENST00000601220 GARTP22102 1010 aa19.38■□□□□ 0.69
CHMP2A-208ENST00000601220 POLR2BP30876 1174 aaKnown RBP19.38■□□□□ 0.69
CHMP2A-208ENST00000601220 PNPLA4P41247 253 aa19.38■□□□□ 0.69
CHMP2A-208ENST00000601220 FNTBP49356 437 aa19.38■□□□□ 0.69
CHMP2A-208ENST00000601220 ATXN1P54253 815 aaKnown RBP19.38■□□□□ 0.69
CHMP2A-208ENST00000601220 NLRP12P59046 1061 aa19.38■□□□□ 0.69
CHMP2A-208ENST00000601220 TFAMQ00059 246 aaKnown RBP19.38■□□□□ 0.69
CHMP2A-208ENST00000601220 PON2Q15165 354 aa19.38■□□□□ 0.69
CHMP2A-208ENST00000601220 RIN3Q8TB24 985 aa19.38■□□□□ 0.69
CHMP2A-208ENST00000601220 USP13Q92995 863 aaPredicted RBP19.38■□□□□ 0.69
CHMP2A-208ENST00000601220 SECISBP2LQ93073 1101 aaKnown RBP19.38■□□□□ 0.69
CHMP2A-208ENST00000601220 ZNF560Q96MR9 790 aa19.38■□□□□ 0.69
CHMP2A-208ENST00000601220 ACBD6Q9BR61 282 aa19.38■□□□□ 0.69
CHMP2A-208ENST00000601220 CBWD1Q9BRT8 395 aa19.38■□□□□ 0.69
CHMP2A-208ENST00000601220 SIX4Q9UIU6 781 aa19.38■□□□□ 0.69
CHMP2A-208ENST00000601220 AGAP1Q9UPQ3 857 aa19.38■□□□□ 0.69
CHMP2A-208ENST00000601220 CCL26Q9Y258 94 aa19.38■□□□□ 0.69
CHMP2A-208ENST00000601220 PCDHB5Q9Y5E4 795 aa19.38■□□□□ 0.69
CHMP2A-208ENST00000601220 PCDHB13Q9Y5F0 798 aa19.38■□□□□ 0.69
CHMP2A-208ENST00000601220 OTOL1A6NHN0 477 aaPredicted RBP19.37■□□□□ 0.69
CHMP2A-208ENST00000601220 GCNT3O95395 438 aa19.37■□□□□ 0.69
CHMP2A-208ENST00000601220 ITGB3P05106 788 aa19.37■□□□□ 0.69
CHMP2A-208ENST00000601220 HOXA6P31267 233 aa19.37■□□□□ 0.69
CHMP2A-208ENST00000601220 CEBPZQ03701 1054 aaKnown RBP19.37■□□□□ 0.69
CHMP2A-208ENST00000601220 SLC39A14Q15043 492 aa19.37■□□□□ 0.69
CHMP2A-208ENST00000601220 LPAL2Q16609 132 aa19.37■□□□□ 0.69
CHMP2A-208ENST00000601220 LAIR1Q6GTX8 287 aa19.37■□□□□ 0.69
CHMP2A-208ENST00000601220 OSTM1Q86WC4 334 aa19.37■□□□□ 0.69
CHMP2A-208ENST00000601220 SYNPOQ8N3V7 929 aa19.37■□□□□ 0.69
CHMP2A-208ENST00000601220 LRRC52Q8N7C0 313 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms