RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 CLCNKBP51801 687 aa18.74■□□□□ 0.59
SHKBP1-224ENST00000600718 TLE2Q04725 743 aa18.74■□□□□ 0.59
SHKBP1-224ENST00000600718 PTP4A2Q12974 167 aa18.74■□□□□ 0.59
SHKBP1-224ENST00000600718 GLB1LQ6UWU2 654 aa18.74■□□□□ 0.59
SHKBP1-224ENST00000600718 PEX26Q7Z412 305 aa18.74■□□□□ 0.59
SHKBP1-224ENST00000600718 CEP112Q8N8E3 955 aa18.74■□□□□ 0.59
SHKBP1-224ENST00000600718 DBF4BQ8NFT6 615 aa18.74■□□□□ 0.59
SHKBP1-224ENST00000600718 UROC1Q96N76 676 aa18.74■□□□□ 0.59
SHKBP1-224ENST00000600718 L1RE1Q9UN81 338 aa18.74■□□□□ 0.59
SHKBP1-224ENST00000600718 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.74■□□□□ 0.59
SHKBP1-224ENST00000600718 O00370 1275 aa18.73■□□□□ 0.59
SHKBP1-224ENST00000600718 CYB561D2O14569 222 aa18.73■□□□□ 0.59
SHKBP1-224ENST00000600718 ENPP3O14638 875 aa18.73■□□□□ 0.59
SHKBP1-224ENST00000600718 ATMINO43313 823 aaPredicted RBP18.73■□□□□ 0.59
SHKBP1-224ENST00000600718 NCK2O43639 380 aa18.73■□□□□ 0.59
SHKBP1-224ENST00000600718 POMCP01189 267 aa18.73■□□□□ 0.59
SHKBP1-224ENST00000600718 CALB1P05937 261 aa18.73■□□□□ 0.59
SHKBP1-224ENST00000600718 WARSP23381 471 aaKnown RBP18.73■□□□□ 0.59
SHKBP1-224ENST00000600718 RPS6KA1Q15418 735 aa18.73■□□□□ 0.59
SHKBP1-224ENST00000600718 TRIM60Q495X7 471 aa18.73■□□□□ 0.59
SHKBP1-224ENST00000600718 C11orf63Q6NUN7 778 aa18.73■□□□□ 0.59
SHKBP1-224ENST00000600718 LCLAT1Q6UWP7 414 aa18.73■□□□□ 0.59
SHKBP1-224ENST00000600718 CRYBG2Q8N1P7 616 aa18.73■□□□□ 0.59
SHKBP1-224ENST00000600718 C1orf131Q8NDD1 294 aaKnown RBP18.73■□□□□ 0.59
SHKBP1-224ENST00000600718 ZNF564Q8TBZ8 553 aaPredicted RBP18.73■□□□□ 0.59
SHKBP1-224ENST00000600718 KBTBD7Q8WVZ9 684 aa18.73■□□□□ 0.59
SHKBP1-224ENST00000600718 OSBPL9Q96SU4 736 aa18.73■□□□□ 0.59
SHKBP1-224ENST00000600718 C11orf70Q9BRQ4 267 aa18.73■□□□□ 0.59
SHKBP1-224ENST00000600718 ELAC1Q9H777 363 aaKnown RBP18.73■□□□□ 0.59
SHKBP1-224ENST00000600718 AMFRQ9UKV5 643 aa18.73■□□□□ 0.59
SHKBP1-224ENST00000600718 INPP5FQ9Y2H2 1132 aa18.73■□□□□ 0.59
SHKBP1-224ENST00000600718 STXBP5LQ9Y2K9 1186 aa18.73■□□□□ 0.59
SHKBP1-224ENST00000600718 SCN1AP35498 2009 aa18.73■□□□□ 0.59
SHKBP1-224ENST00000600718 A8MXQ7 604 aa18.73■□□□□ 0.59
SHKBP1-224ENST00000600718 CTIFO43310 598 aaKnown RBP18.73■□□□□ 0.59
SHKBP1-224ENST00000600718 MICAL2O94851 1124 aa18.73■□□□□ 0.59
SHKBP1-224ENST00000600718 CAPN2P17655 700 aa18.73■□□□□ 0.59
SHKBP1-224ENST00000600718 RRM1P23921 792 aa18.73■□□□□ 0.59
SHKBP1-224ENST00000600718 TUSC3Q13454 348 aa18.73■□□□□ 0.59
SHKBP1-224ENST00000600718 UPP1Q16831 310 aa18.73■□□□□ 0.59
SHKBP1-224ENST00000600718 MMS22LQ6ZRQ5 1243 aa18.73■□□□□ 0.59
SHKBP1-224ENST00000600718 NT5DC3Q86UY8 548 aa18.73■□□□□ 0.59
SHKBP1-224ENST00000600718 ERICH1Q86X53 443 aa18.73■□□□□ 0.59
SHKBP1-224ENST00000600718 ADGRF2Q8IZF7 708 aa18.73■□□□□ 0.59
SHKBP1-224ENST00000600718 MRPL47Q9HD33 250 aaKnown RBP18.73■□□□□ 0.59
SHKBP1-224ENST00000600718 TMEM161AQ9NX61 479 aa18.73■□□□□ 0.59
SHKBP1-224ENST00000600718 SRGAP2O75044 1071 aa18.72■□□□□ 0.59
SHKBP1-224ENST00000600718 ACOT1Q86TX2 421 aa18.72■□□□□ 0.59
SHKBP1-224ENST00000600718 PDCL2Q8N4E4 241 aa18.72■□□□□ 0.59
SHKBP1-224ENST00000600718 SENP8Q96LD8 212 aa18.72■□□□□ 0.59
SHKBP1-224ENST00000600718 PRDM10Q9NQV6 1147 aa18.72■□□□□ 0.59
SHKBP1-224ENST00000600718 KANSL3Q9P2N6 904 aa18.72■□□□□ 0.59
SHKBP1-224ENST00000600718 CHORDC1Q9UHD1 332 aaPredicted RBP18.72■□□□□ 0.59
SHKBP1-224ENST00000600718 SCINQ9Y6U3 715 aa18.72■□□□□ 0.59
SHKBP1-224ENST00000600718 CASTOR2A6NHX0 329 aa18.72■□□□□ 0.59
SHKBP1-224ENST00000600718 KIF4AO95239 1232 aa18.72■□□□□ 0.59
SHKBP1-224ENST00000600718 FGFR1P11362 822 aa18.72■□□□□ 0.59
SHKBP1-224ENST00000600718 PLEKHA7Q6IQ23 1121 aa18.72■□□□□ 0.59
SHKBP1-224ENST00000600718 TMEM86AQ8N2M4 240 aa18.72■□□□□ 0.59
SHKBP1-224ENST00000600718 MSANTD4Q8NCY6 345 aa18.72■□□□□ 0.59
SHKBP1-224ENST00000600718 URGCPQ8TCY9 931 aa18.72■□□□□ 0.59
SHKBP1-224ENST00000600718 DIS3LQ8TF46 1054 aaKnown RBP18.72■□□□□ 0.59
SHKBP1-224ENST00000600718 ANKRD7Q92527 254 aa18.72■□□□□ 0.59
SHKBP1-224ENST00000600718 NME7Q9Y5B8 376 aa18.72■□□□□ 0.59
SHKBP1-224ENST00000600718 ALG6Q9Y672 507 aa18.72■□□□□ 0.59
SHKBP1-224ENST00000600718 CXCL10P02778 98 aa18.71■□□□□ 0.59
SHKBP1-224ENST00000600718 AARSP49588 968 aaKnown RBP eCLIP18.71■□□□□ 0.59
SHKBP1-224ENST00000600718 NOMO2Q5JPE7 1267 aa18.71■□□□□ 0.59
SHKBP1-224ENST00000600718 ARHGAP17Q68EM7 881 aa18.71■□□□□ 0.59
SHKBP1-224ENST00000600718 DSTYKQ6XUX3 929 aa18.71■□□□□ 0.59
SHKBP1-224ENST00000600718 TSC1Q92574 1164 aa18.71■□□□□ 0.59
SHKBP1-224ENST00000600718 TNIP3Q96KP6 325 aa18.71■□□□□ 0.59
SHKBP1-224ENST00000600718 GOLPH3Q9H4A6 298 aa18.71■□□□□ 0.59
SHKBP1-224ENST00000600718 PARVAQ9NVD7 372 aa18.71■□□□□ 0.59
SHKBP1-224ENST00000600718 CACNG4Q9UBN1 327 aa18.71■□□□□ 0.59
SHKBP1-224ENST00000600718 MYH10P35580 1976 aa18.7■□□□□ 0.58
SHKBP1-224ENST00000600718 M0QYV0 167 aa18.7■□□□□ 0.58
SHKBP1-224ENST00000600718 PDGFRBP09619 1106 aa18.7■□□□□ 0.58
SHKBP1-224ENST00000600718 GPD2P43304 727 aa18.7■□□□□ 0.58
SHKBP1-224ENST00000600718 CKAP4Q07065 602 aaKnown RBP18.7■□□□□ 0.58
SHKBP1-224ENST00000600718 MESDQ14696 234 aa18.7■□□□□ 0.58
SHKBP1-224ENST00000600718 C2CD6Q53TS8 623 aa18.7■□□□□ 0.58
SHKBP1-224ENST00000600718 CLLU1OSQ5K130 101 aa18.7■□□□□ 0.58
SHKBP1-224ENST00000600718 C12orf29Q8N999 325 aa18.7■□□□□ 0.58
SHKBP1-224ENST00000600718 HES6Q96HZ4 224 aa18.7■□□□□ 0.58
SHKBP1-224ENST00000600718 C11orf49Q9H6J7 331 aa18.7■□□□□ 0.58
SHKBP1-224ENST00000600718 RNF14Q9UBS8 474 aa18.7■□□□□ 0.58
SHKBP1-224ENST00000600718 TSPAN16Q9UKR8 245 aa18.7■□□□□ 0.58
SHKBP1-224ENST00000600718 STRIP2Q9ULQ0 834 aa18.7■□□□□ 0.58
SHKBP1-224ENST00000600718 PACSIN2Q9UNF0 486 aaPredicted RBP18.7■□□□□ 0.58
SHKBP1-224ENST00000600718 PCDHB7Q9Y5E2 793 aa18.7■□□□□ 0.58
SHKBP1-224ENST00000600718 CES2O00748 559 aa18.7■□□□□ 0.58
SHKBP1-224ENST00000600718 GABRDO14764 452 aa18.7■□□□□ 0.58
SHKBP1-224ENST00000600718 IGFBP6P24592 240 aaPredicted RBP18.7■□□□□ 0.58
SHKBP1-224ENST00000600718 LMO2P25791 158 aa18.7■□□□□ 0.58
SHKBP1-224ENST00000600718 CCL23P55773 120 aa18.7■□□□□ 0.58
SHKBP1-224ENST00000600718 MAMLD1Q13495 774 aa18.7■□□□□ 0.58
SHKBP1-224ENST00000600718 WSCD1Q658N2 575 aa18.7■□□□□ 0.58
SHKBP1-224ENST00000600718 DCLRE1AQ6PJP8 1040 aa18.7■□□□□ 0.58
SHKBP1-224ENST00000600718 CREG2Q8IUH2 290 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms