RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 ATP2C2O75185 946 aa21.37■■□□□ 1.01
SHKBP1-222ENST00000600320 UCHL3P15374 230 aa21.37■■□□□ 1.01
SHKBP1-222ENST00000600320 PSMC1P62191 440 aaKnown RBP21.37■■□□□ 1.01
SHKBP1-222ENST00000600320 BMS1Q14692 1282 aaKnown RBP21.37■■□□□ 1.01
SHKBP1-222ENST00000600320 ARHGAP44Q17R89 818 aa21.37■■□□□ 1.01
SHKBP1-222ENST00000600320 LRRTM3Q86VH5 581 aa21.37■■□□□ 1.01
SHKBP1-222ENST00000600320 LPIN3Q9BQK8 851 aa21.37■■□□□ 1.01
SHKBP1-222ENST00000600320 ZCWPW1Q9H0M4 648 aa21.37■■□□□ 1.01
SHKBP1-222ENST00000600320 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.37■■□□□ 1.01
SHKBP1-222ENST00000600320 FNIP2Q9P278 1114 aa21.37■■□□□ 1.01
SHKBP1-222ENST00000600320 BARX2Q9UMQ3 279 aaPredicted RBP21.37■■□□□ 1.01
SHKBP1-222ENST00000600320 MTCH2Q9Y6C9 303 aa21.37■■□□□ 1.01
SHKBP1-222ENST00000600320 OR6C75A6NL08 312 aa21.36■■□□□ 1.01
SHKBP1-222ENST00000600320 RNF225M0QZC1 329 aaPredicted RBP21.36■■□□□ 1.01
SHKBP1-222ENST00000600320 PER2O15055 1255 aa21.36■■□□□ 1.01
SHKBP1-222ENST00000600320 OR1D2P34982 312 aa21.36■■□□□ 1.01
SHKBP1-222ENST00000600320 CDR1P51861 262 aa21.36■■□□□ 1.01
SHKBP1-222ENST00000600320 MFAP3P55082 362 aa21.36■■□□□ 1.01
SHKBP1-222ENST00000600320 ARPP19P56211 112 aa21.36■■□□□ 1.01
SHKBP1-222ENST00000600320 POLR2FP61218 127 aaKnown RBP21.36■■□□□ 1.01
SHKBP1-222ENST00000600320 ZNF394Q53GI3 561 aa21.36■■□□□ 1.01
SHKBP1-222ENST00000600320 INTS6LQ5JSJ4 861 aaKnown RBP21.36■■□□□ 1.01
SHKBP1-222ENST00000600320 SLC8B1Q6J4K2 584 aa21.36■■□□□ 1.01
SHKBP1-222ENST00000600320 NEK11Q8NG66 645 aa21.36■■□□□ 1.01
SHKBP1-222ENST00000600320 MYLIPQ8WY64 445 aa21.36■■□□□ 1.01
SHKBP1-222ENST00000600320 GUCD1Q96NT3 240 aa21.36■■□□□ 1.01
SHKBP1-222ENST00000600320 PKMYT1Q99640 499 aa21.36■■□□□ 1.01
SHKBP1-222ENST00000600320 SYT15Q9BQS2 421 aa21.36■■□□□ 1.01
SHKBP1-222ENST00000600320 ACBD6Q9BR61 282 aa21.36■■□□□ 1.01
SHKBP1-222ENST00000600320 TRIM5Q9C035 493 aa21.36■■□□□ 1.01
SHKBP1-222ENST00000600320 GPR88Q9GZN0 384 aa21.36■■□□□ 1.01
SHKBP1-222ENST00000600320 CRTAC1Q9NQ79 661 aa21.36■■□□□ 1.01
SHKBP1-222ENST00000600320 TMLHEQ9NVH6 421 aa21.36■■□□□ 1.01
SHKBP1-222ENST00000600320 PCDHB4Q9Y5E5 795 aa21.36■■□□□ 1.01
SHKBP1-222ENST00000600320 CHD7Q9P2D1 2997 aa21.35■■□□□ 1.01
SHKBP1-222ENST00000600320 FSD2A1L4K1 749 aa21.35■■□□□ 1.01
SHKBP1-222ENST00000600320 CLASP2O75122 1294 aaKnown RBP21.35■■□□□ 1.01
SHKBP1-222ENST00000600320 PNMA6AP0CW24 399 aaPredicted RBP21.35■■□□□ 1.01
SHKBP1-222ENST00000600320 POU3F3P20264 500 aaPredicted RBP21.35■■□□□ 1.01
SHKBP1-222ENST00000600320 ROR1Q01973 937 aa21.35■■□□□ 1.01
SHKBP1-222ENST00000600320 ENOSF1Q7L5Y1 443 aa21.35■■□□□ 1.01
SHKBP1-222ENST00000600320 ACOT1Q86TX2 421 aa21.35■■□□□ 1.01
SHKBP1-222ENST00000600320 UNC93AQ86WB7 457 aa21.35■■□□□ 1.01
SHKBP1-222ENST00000600320 DEFB123Q8N688 67 aa21.35■■□□□ 1.01
SHKBP1-222ENST00000600320 SHC3Q92529 594 aa21.35■■□□□ 1.01
SHKBP1-222ENST00000600320 CDX2Q99626 313 aaPredicted RBP21.35■■□□□ 1.01
SHKBP1-222ENST00000600320 EMILIN2Q9BXX0 1053 aa21.35■■□□□ 1.01
SHKBP1-222ENST00000600320 NLRC4Q9NPP4 1024 aa21.35■■□□□ 1.01
SHKBP1-222ENST00000600320 LMCD1Q9NZU5 365 aa21.35■■□□□ 1.01
SHKBP1-222ENST00000600320 CDH9Q9ULB4 789 aa21.35■■□□□ 1.01
SHKBP1-222ENST00000600320 WDR27A2RRH5 827 aa21.34■■□□□ 1.01
SHKBP1-222ENST00000600320 MYBPHLA2RUH7 354 aa21.34■■□□□ 1.01
SHKBP1-222ENST00000600320 VNN2O95498 520 aa21.34■■□□□ 1.01
SHKBP1-222ENST00000600320 IGFBP4P22692 258 aa21.34■■□□□ 1.01
SHKBP1-222ENST00000600320 PCSK1P29120 753 aa21.34■■□□□ 1.01
SHKBP1-222ENST00000600320 NDUFV1P49821 464 aa21.34■■□□□ 1.01
SHKBP1-222ENST00000600320 ZNF75DP51815 510 aa21.34■■□□□ 1.01
SHKBP1-222ENST00000600320 RAD23BP54727 409 aa21.34■■□□□ 1.01
SHKBP1-222ENST00000600320 YWHAEP62258 255 aaKnown RBP21.34■■□□□ 1.01
SHKBP1-222ENST00000600320 CREMQ03060 361 aa21.34■■□□□ 1.01
SHKBP1-222ENST00000600320 RAPGEF1Q13905 1077 aa21.34■■□□□ 1.01
SHKBP1-222ENST00000600320 RAB33AQ14088 237 aa21.34■■□□□ 1.01
SHKBP1-222ENST00000600320 DRAP1Q14919 205 aaPredicted RBP21.34■■□□□ 1.01
SHKBP1-222ENST00000600320 DUSP6Q16828 381 aa21.34■■□□□ 1.01
SHKBP1-222ENST00000600320 TCEAL5Q5H9L2 206 aa21.34■■□□□ 1.01
SHKBP1-222ENST00000600320 RBM23Q86U06 439 aaKnown RBP21.34■■□□□ 1.01
SHKBP1-222ENST00000600320 PALB2Q86YC2 1186 aa21.34■■□□□ 1.01
SHKBP1-222ENST00000600320 JAKMIP2Q96AA8 810 aa21.34■■□□□ 1.01
SHKBP1-222ENST00000600320 FAM81BQ96LP2 452 aa21.34■■□□□ 1.01
SHKBP1-222ENST00000600320 NT5C1AQ9BXI3 368 aa21.34■■□□□ 1.01
SHKBP1-222ENST00000600320 OXCT2Q9BYC2 517 aaPredicted RBP21.34■■□□□ 1.01
SHKBP1-222ENST00000600320 TTYH3Q9C0H2 523 aa21.34■■□□□ 1.01
SHKBP1-222ENST00000600320 NSUN3Q9H649 340 aaKnown RBP21.34■■□□□ 1.01
SHKBP1-222ENST00000600320 CNTN6Q9UQ52 1028 aa21.34■■□□□ 1.01
SHKBP1-222ENST00000600320 FOXN3O00409 490 aaPredicted RBP21.33■■□□□ 1.01
SHKBP1-222ENST00000600320 CALCAP01258 141 aa21.33■■□□□ 1.01
SHKBP1-222ENST00000600320 TPM3P06753 285 aa21.33■■□□□ 1.01
SHKBP1-222ENST00000600320 CPB1P15086 417 aa21.33■■□□□ 1.01
SHKBP1-222ENST00000600320 PTPN1P18031 435 aaKnown RBP21.33■■□□□ 1.01
SHKBP1-222ENST00000600320 KLRC2P26717 231 aa21.33■■□□□ 1.01
SHKBP1-222ENST00000600320 GTF2F1P35269 517 aaKnown RBP eCLIP21.33■■□□□ 1.011e-6■■■■■ 54.6
SHKBP1-222ENST00000600320 ZNF132P52740 706 aa21.33■■□□□ 1.01
SHKBP1-222ENST00000600320 TSPY1Q01534 308 aa21.33■■□□□ 1.01
SHKBP1-222ENST00000600320 FAM171BQ6P995 826 aa21.33■■□□□ 1.01
SHKBP1-222ENST00000600320 TMEM270Q6UE05 265 aa21.33■■□□□ 1.01
SHKBP1-222ENST00000600320 RNF19BQ6ZMZ0 732 aa21.33■■□□□ 1.01
SHKBP1-222ENST00000600320 VSTM4Q8IW00 320 aa21.33■■□□□ 1.01
SHKBP1-222ENST00000600320 CRYBG2Q8N1P7 616 aa21.33■■□□□ 1.01
SHKBP1-222ENST00000600320 SLC4A11Q8NBS3 891 aa21.33■■□□□ 1.01
SHKBP1-222ENST00000600320 RBBP8NLQ8NC74 664 aaPredicted RBP21.33■■□□□ 1.01
SHKBP1-222ENST00000600320 SLC22A17Q8WUG5 538 aa21.33■■□□□ 1.01
SHKBP1-222ENST00000600320 PGLYRP2Q96PD5 576 aa21.33■■□□□ 1.01
SHKBP1-222ENST00000600320 GAS2L1Q99501 681 aaPredicted RBP21.33■■□□□ 1.01
SHKBP1-222ENST00000600320 STK33Q9BYT3 514 aa21.33■■□□□ 1.01
SHKBP1-222ENST00000600320 FAM124BQ9H5Z6 455 aaPredicted RBP21.33■■□□□ 1.01
SHKBP1-222ENST00000600320 TLE6Q9H808 572 aa21.33■■□□□ 1.01
SHKBP1-222ENST00000600320 MTMR10Q9NXD2 777 aa21.33■■□□□ 1.01
SHKBP1-222ENST00000600320 GTF3C4Q9UKN8 822 aa21.33■■□□□ 1.01
SHKBP1-222ENST00000600320 PLXNA3P51805 1871 aa21.32■■□□□ 1
SHKBP1-222ENST00000600320 ADH1AP07327 375 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms