RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 FAM102AQ5T9C2 384 aaPredicted RBP12.18□□□□□ -0.46
ARHGEF1-220ENST00000600274 OR6B2Q6IFH4 312 aa12.18□□□□□ -0.46
ARHGEF1-220ENST00000600274 ZC3H18Q86VM9 953 aaKnown RBP12.18□□□□□ -0.46
ARHGEF1-220ENST00000600274 C12orf29Q8N999 325 aa12.18□□□□□ -0.46
ARHGEF1-220ENST00000600274 GRK7Q8WTQ7 553 aa12.18□□□□□ -0.46
ARHGEF1-220ENST00000600274 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 CNMDO75829 334 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 TGFB3P10600 412 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 CHRM1P11229 460 aaPredicted RBP12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 ADORA2AP29274 412 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 GBP2P32456 591 aaPredicted RBP12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 TAF5Q15542 800 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 PTPN20Q4JDL3 420 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 PRAMEF19Q5SWL8 479 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 ZPBP2Q6X784 338 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 RFX6Q8HWS3 928 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 KIAA0319LQ8IZA0 1049 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 LENG1Q96BZ8 264 aaPredicted RBP12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 RBM15Q96T37 977 aaKnown RBP eCLIP12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 AVENQ9NQS1 362 aaPredicted RBP12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 SYNJ2BP-COX16A0A087WUM0 186 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 A0A0G2JLL6 359 aaPredicted RBP12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 HOXC6P09630 235 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 RARGP13631 454 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 MMP8P22894 467 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 EPHX2P34913 555 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 GRM1Q13255 1194 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 BYSLQ13895 437 aaKnown RBP12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 NAA25Q14CX7 972 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 AGBL2Q5U5Z8 902 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 TRIM72Q6ZMU5 477 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 PRRT2Q7Z6L0 340 aaPredicted RBP12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 CACNA2D3Q8IZS8 1091 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 SEC14L1Q92503 715 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 ART4Q93070 314 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 XPO6Q96QU8 1125 aaKnown RBP12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 TACO1Q9BSH4 297 aaKnown RBP12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 MIS12Q9H081 205 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 TMEM134Q9H6X4 195 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 LRRC19Q9H756 370 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 ERAP1Q9NZ08 941 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 COX16Q9P0S2 106 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 SLC12A6Q9UHW9 1150 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 ACKR2O00590 384 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 FAM107AO95990 144 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 CALB1P05937 261 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 CD48P09326 243 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 FASTKD3Q14CZ7 662 aaKnown RBP12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 C6orf118Q5T5N4 469 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 CCDC13Q8IYE1 715 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 KCTD6Q8NC69 237 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 KIF12Q96FN5 646 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 LPIN3Q9BQK8 851 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 NGRNQ9NPE2 291 aaKnown RBP12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 GPATCH2LQ9NWQ4 482 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 CPSF3Q9UKF6 684 aaKnown RBP12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 STYXL1Q9Y6J8 313 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 ADGRA2Q96PE1 1338 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 LTBP3Q9NS15 1303 aa12.17□□□□□ -0.46
ARHGEF1-220ENST00000600274 CST8O60676 142 aa12.16□□□□□ -0.46
ARHGEF1-220ENST00000600274 SLC25A27O95847 323 aa12.16□□□□□ -0.46
ARHGEF1-220ENST00000600274 KRT15P19012 456 aa12.16□□□□□ -0.46
ARHGEF1-220ENST00000600274 PHKA2P46019 1235 aa12.16□□□□□ -0.46
ARHGEF1-220ENST00000600274 SH3PXD2AQ5TCZ1 1133 aa12.16□□□□□ -0.46
ARHGEF1-220ENST00000600274 GKAP1Q5VSY0 366 aaPredicted RBP12.16□□□□□ -0.46
ARHGEF1-220ENST00000600274 FAM47EQ6ZV65 393 aa12.16□□□□□ -0.46
ARHGEF1-220ENST00000600274 ZBED8Q8IZ13 594 aa12.16□□□□□ -0.46
ARHGEF1-220ENST00000600274 CCDC89Q8N998 374 aa12.16□□□□□ -0.46
ARHGEF1-220ENST00000600274 C1orf127Q8N9H9 656 aa12.16□□□□□ -0.46
ARHGEF1-220ENST00000600274 MAIP1Q8WWC4 291 aa12.16□□□□□ -0.46
ARHGEF1-220ENST00000600274 CPXM1Q96SM3 734 aa12.16□□□□□ -0.46
ARHGEF1-220ENST00000600274 C2orf40Q9H1Z8 148 aa12.16□□□□□ -0.46
ARHGEF1-220ENST00000600274 SETD4Q9NVD3 440 aa12.16□□□□□ -0.46
ARHGEF1-220ENST00000600274 KLK14Q9P0G3 267 aa12.16□□□□□ -0.46
ARHGEF1-220ENST00000600274 DDX20Q9UHI6 824 aaKnown RBP12.16□□□□□ -0.46
ARHGEF1-220ENST00000600274 ZBTB42B2RXF5 422 aa12.16□□□□□ -0.46
ARHGEF1-220ENST00000600274 SOCS7O14512 581 aa12.16□□□□□ -0.46
ARHGEF1-220ENST00000600274 HBP1O60381 514 aa12.16□□□□□ -0.46
ARHGEF1-220ENST00000600274 LGALS2P05162 132 aa12.16□□□□□ -0.46
ARHGEF1-220ENST00000600274 YARSP54577 528 aaKnown RBP12.16□□□□□ -0.46
ARHGEF1-220ENST00000600274 BASP1P80723 227 aaKnown RBP12.16□□□□□ -0.46
ARHGEF1-220ENST00000600274 AUHQ13825 339 aaKnown RBP12.16□□□□□ -0.46
ARHGEF1-220ENST00000600274 RAB6CQ53S08 254 aa12.16□□□□□ -0.46
ARHGEF1-220ENST00000600274 ARMC9Q7Z3E5 817 aa12.16□□□□□ -0.46
ARHGEF1-220ENST00000600274 LRRC34Q8IZ02 419 aa12.16□□□□□ -0.46
ARHGEF1-220ENST00000600274 RUNDC3BQ96NL0 473 aa12.16□□□□□ -0.46
ARHGEF1-220ENST00000600274 TRIM6Q9C030 488 aaPredicted RBP12.16□□□□□ -0.46
ARHGEF1-220ENST00000600274 RAB6CQ9H0N0 254 aa12.16□□□□□ -0.46
ARHGEF1-220ENST00000600274 SNX9Q9Y5X1 595 aa12.16□□□□□ -0.46
ARHGEF1-220ENST00000600274 ATP8B3O60423 1300 aa12.16□□□□□ -0.46
ARHGEF1-220ENST00000600274 PSME4Q14997 1843 aa12.16□□□□□ -0.46
ARHGEF1-220ENST00000600274 IGKV6D-21A0A0A0MT36 114 aa12.15□□□□□ -0.46
ARHGEF1-220ENST00000600274 TMEM120BA0PK00 339 aa12.15□□□□□ -0.46
ARHGEF1-220ENST00000600274 MEFVO15553 781 aaPredicted RBP12.15□□□□□ -0.46
ARHGEF1-220ENST00000600274 TJP3O95049 919 aa12.15□□□□□ -0.46
ARHGEF1-220ENST00000600274 GH1P01241 217 aa12.15□□□□□ -0.46
ARHGEF1-220ENST00000600274 BRAFP15056 766 aa12.15□□□□□ -0.46
ARHGEF1-220ENST00000600274 EDNRBP24530 442 aa12.15□□□□□ -0.46
ARHGEF1-220ENST00000600274 ABCD1P33897 745 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms