RNA–Protein interactions for RNA: ENST00000599227.5

ZNF544-213, Transcript of zinc finger protein 544, humanhuman

TSL 1 (best) BASIC

Gene ZNF544, Length 3,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-213ENST00000599227 RPA3P35244 121 aaPredicted RBP11.82□□□□□ -0.52
ZNF544-213ENST00000599227 MSH2P43246 934 aa11.82□□□□□ -0.52
ZNF544-213ENST00000599227 DRG2P55039 364 aaKnown RBP11.82□□□□□ -0.52
ZNF544-213ENST00000599227 CLUL1Q15846 466 aa11.82□□□□□ -0.52
ZNF544-213ENST00000599227 CCDC6Q16204 474 aa11.82□□□□□ -0.52
ZNF544-213ENST00000599227 MAPK6Q16659 721 aa11.82□□□□□ -0.52
ZNF544-213ENST00000599227 HSDL1Q3SXM5 330 aa11.82□□□□□ -0.52
ZNF544-213ENST00000599227 GPAT2Q6NUI2 795 aa11.82□□□□□ -0.52
ZNF544-213ENST00000599227 PALM2Q8IXS6 379 aa11.82□□□□□ -0.52
ZNF544-213ENST00000599227 NME8Q8N427 588 aa11.82□□□□□ -0.52
ZNF544-213ENST00000599227 CCNYQ8ND76 341 aa11.82□□□□□ -0.52
ZNF544-213ENST00000599227 ASAP3Q8TDY4 903 aa11.82□□□□□ -0.52
ZNF544-213ENST00000599227 PSPC1Q8WXF1 523 aaKnown RBP11.82□□□□□ -0.52
ZNF544-213ENST00000599227 LPIN3Q9BQK8 851 aa11.82□□□□□ -0.52
ZNF544-213ENST00000599227 MYLK2Q9H1R3 596 aa11.82□□□□□ -0.52
ZNF544-213ENST00000599227 TJP2Q9UDY2 1190 aa11.82□□□□□ -0.52
ZNF544-213ENST00000599227 NPTXRO95502 500 aa11.81□□□□□ -0.52
ZNF544-213ENST00000599227 PSMC1P62191 440 aaKnown RBP11.81□□□□□ -0.52
ZNF544-213ENST00000599227 TAF11Q15544 211 aa11.81□□□□□ -0.52
ZNF544-213ENST00000599227 SLC9A9Q8IVB4 645 aa11.81□□□□□ -0.52
ZNF544-213ENST00000599227 DTX3LQ8TDB6 740 aa11.81□□□□□ -0.52
ZNF544-213ENST00000599227 RNF34Q969K3 372 aa11.81□□□□□ -0.52
ZNF544-213ENST00000599227 SERPINB12Q96P63 405 aa11.81□□□□□ -0.52
ZNF544-213ENST00000599227 METTL5Q9NRN9 209 aaKnown RBP11.81□□□□□ -0.52
ZNF544-213ENST00000599227 PHTF1Q9UMS5 762 aa11.81□□□□□ -0.52
ZNF544-213ENST00000599227 PCDHB2Q9Y5E7 798 aa11.81□□□□□ -0.52
ZNF544-213ENST00000599227 ARFGEF1Q9Y6D6 1849 aa11.81□□□□□ -0.52
ZNF544-213ENST00000599227 LAMA3Q16787 3333 aa11.81□□□□□ -0.52
ZNF544-213ENST00000599227 PTPRJQ12913 1337 aa11.81□□□□□ -0.52
ZNF544-213ENST00000599227 FSCN2O14926 492 aa11.81□□□□□ -0.52
ZNF544-213ENST00000599227 CST3P01034 146 aaPredicted RBP11.81□□□□□ -0.52
ZNF544-213ENST00000599227 SLC4A1P02730 911 aa11.81□□□□□ -0.52
ZNF544-213ENST00000599227 KRT4P19013 534 aa11.81□□□□□ -0.52
ZNF544-213ENST00000599227 RFX1P22670 979 aa11.81□□□□□ -0.52
ZNF544-213ENST00000599227 MAN1A1P33908 653 aa11.81□□□□□ -0.52
ZNF544-213ENST00000599227 TDRD10Q5VZ19 366 aaKnown RBP11.81□□□□□ -0.52
ZNF544-213ENST00000599227 LVRNQ6Q4G3 990 aa11.81□□□□□ -0.52
ZNF544-213ENST00000599227 ECHDC2Q86YB7 292 aa11.81□□□□□ -0.52
ZNF544-213ENST00000599227 HACE1Q8IYU2 909 aa11.81□□□□□ -0.52
ZNF544-213ENST00000599227 KCTD6Q8NC69 237 aa11.81□□□□□ -0.52
ZNF544-213ENST00000599227 CD101Q93033 1021 aa11.81□□□□□ -0.52
ZNF544-213ENST00000599227 LRRC37BQ96QE4 947 aa11.81□□□□□ -0.52
ZNF544-213ENST00000599227 IQCGQ9H095 443 aaKnown RBP11.81□□□□□ -0.52
ZNF544-213ENST00000599227 LRRC19Q9H756 370 aa11.81□□□□□ -0.52
ZNF544-213ENST00000599227 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.81□□□□□ -0.521e-6■■■□□ 14.8
ZNF544-213ENST00000599227 GEMIN8Q9NWZ8 242 aaKnown RBP11.81□□□□□ -0.52
ZNF544-213ENST00000599227 KCND2Q9NZV8 630 aa11.81□□□□□ -0.52
ZNF544-213ENST00000599227 MARCOQ9UEW3 520 aaPredicted RBP11.81□□□□□ -0.52
ZNF544-213ENST00000599227 FAM47DPA6NHR8 397 aa11.8□□□□□ -0.52
ZNF544-213ENST00000599227 M0QYV0 167 aa11.8□□□□□ -0.52
ZNF544-213ENST00000599227 DNAJC8O75937 253 aaPredicted RBP11.8□□□□□ -0.52
ZNF544-213ENST00000599227 TNNC2P02585 160 aa11.8□□□□□ -0.52
ZNF544-213ENST00000599227 RARBP10826 455 aa11.8□□□□□ -0.52
ZNF544-213ENST00000599227 GBP1P32455 592 aa11.8□□□□□ -0.52
ZNF544-213ENST00000599227 MXRA7P84157 204 aa11.8□□□□□ -0.52
ZNF544-213ENST00000599227 KRT81Q14533 505 aa11.8□□□□□ -0.52
ZNF544-213ENST00000599227 PYROXD1Q8WU10 500 aa11.8□□□□□ -0.52
ZNF544-213ENST00000599227 TIMM13Q9Y5L4 95 aaPredicted RBP11.8□□□□□ -0.52
ZNF544-213ENST00000599227 SNX9Q9Y5X1 595 aa11.8□□□□□ -0.52
ZNF544-213ENST00000599227 BTAF1O14981 1849 aa11.8□□□□□ -0.52
ZNF544-213ENST00000599227 DYNC1LI2O43237 492 aaPredicted RBP11.8□□□□□ -0.52
ZNF544-213ENST00000599227 EPHB2P29323 1055 aa11.8□□□□□ -0.52
ZNF544-213ENST00000599227 WDR4P57081 412 aaKnown RBP11.8□□□□□ -0.52
ZNF544-213ENST00000599227 ITIH4Q14624 930 aa11.8□□□□□ -0.52
ZNF544-213ENST00000599227 CROCCP2Q86T23 111 aa11.8□□□□□ -0.52
ZNF544-213ENST00000599227 CKAP2Q8WWK9 683 aa11.8□□□□□ -0.52
ZNF544-213ENST00000599227 SLC10A4Q96EP9 437 aa11.8□□□□□ -0.52
ZNF544-213ENST00000599227 AGAP3Q96P47 875 aa11.8□□□□□ -0.52
ZNF544-213ENST00000599227 SLC13A1Q9BZW2 595 aa11.8□□□□□ -0.52
ZNF544-213ENST00000599227 UNKQ9C0B0 810 aaKnown RBP11.8□□□□□ -0.52
ZNF544-213ENST00000599227 NOP53Q9NZM5 478 aaKnown RBP11.8□□□□□ -0.52
ZNF544-213ENST00000599227 WHRNQ9P202 907 aa11.8□□□□□ -0.52
ZNF544-213ENST00000599227 MCM8Q9UJA3 840 aa11.8□□□□□ -0.52
ZNF544-213ENST00000599227 CHMP2BQ9UQN3 213 aa11.8□□□□□ -0.52
ZNF544-213ENST00000599227 NUB1Q9Y5A7 615 aa11.8□□□□□ -0.52
ZNF544-213ENST00000599227 UBE4BO95155 1302 aa11.8□□□□□ -0.52
ZNF544-213ENST00000599227 ATP2A1O14983 1001 aa11.8□□□□□ -0.52
ZNF544-213ENST00000599227 PROSCO94903 275 aa11.8□□□□□ -0.52
ZNF544-213ENST00000599227 PTPRAP18433 802 aa11.8□□□□□ -0.52
ZNF544-213ENST00000599227 GCKP35557 465 aa11.8□□□□□ -0.52
ZNF544-213ENST00000599227 RAD23BP54727 409 aa11.8□□□□□ -0.52
ZNF544-213ENST00000599227 SP2Q02086 613 aa11.8□□□□□ -0.52
ZNF544-213ENST00000599227 TFDP1Q14186 410 aa11.8□□□□□ -0.52
ZNF544-213ENST00000599227 FAM102AQ5T9C2 384 aaPredicted RBP11.8□□□□□ -0.52
ZNF544-213ENST00000599227 EFCAB12Q6NXP0 572 aa11.8□□□□□ -0.52
ZNF544-213ENST00000599227 SCYL3Q8IZE3 742 aa11.8□□□□□ -0.52
ZNF544-213ENST00000599227 HASPINQ8TF76 798 aa11.8□□□□□ -0.52
ZNF544-213ENST00000599227 CLEC4DQ8WXI8 215 aa11.8□□□□□ -0.52
ZNF544-213ENST00000599227 CENPTQ96BT3 561 aa11.8□□□□□ -0.52
ZNF544-213ENST00000599227 SPDL1Q96EA4 605 aa11.8□□□□□ -0.52
ZNF544-213ENST00000599227 DDX27Q96GQ7 796 aaKnown RBP11.8□□□□□ -0.52
ZNF544-213ENST00000599227 YIPF3Q9GZM5 350 aa11.8□□□□□ -0.52
ZNF544-213ENST00000599227 APOBEC3GQ9HC16 384 aaKnown RBP11.8□□□□□ -0.52
ZNF544-213ENST00000599227 ZNF536O15090 1300 aa11.8□□□□□ -0.52
ZNF544-213ENST00000599227 ZNF541Q9H0D2 1346 aa11.8□□□□□ -0.52
ZNF544-213ENST00000599227 ENO4A6NNW6 628 aa11.79□□□□□ -0.52
ZNF544-213ENST00000599227 SLC26A4O43511 780 aa11.79□□□□□ -0.52
ZNF544-213ENST00000599227 ITGB3P05106 788 aa11.79□□□□□ -0.52
ZNF544-213ENST00000599227 ADRA1DP25100 572 aa11.79□□□□□ -0.52
ZNF544-213ENST00000599227 ARPP19P56211 112 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms