RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 SLC30A4O14863 429 aa18.36■□□□□ 0.53
PNKP-210ENST00000597965 PLCG1P19174 1290 aa18.36■□□□□ 0.53
PNKP-210ENST00000597965 DDIT3P35638 169 aa18.36■□□□□ 0.53
PNKP-210ENST00000597965 SOX9P48436 509 aa18.36■□□□□ 0.53
PNKP-210ENST00000597965 FNTBP49356 437 aa18.36■□□□□ 0.53
PNKP-210ENST00000597965 TSPY1Q01534 308 aa18.36■□□□□ 0.53
PNKP-210ENST00000597965 GRSF1Q12849 480 aaKnown RBP eCLIP18.36■□□□□ 0.53
PNKP-210ENST00000597965 GAS6Q14393 721 aa18.36■□□□□ 0.53
PNKP-210ENST00000597965 PON2Q15165 354 aa18.36■□□□□ 0.53
PNKP-210ENST00000597965 NFE2Q16621 373 aaPredicted RBP18.36■□□□□ 0.53
PNKP-210ENST00000597965 CMTM8Q8IZV2 173 aa18.36■□□□□ 0.53
PNKP-210ENST00000597965 KIF9Q9HAQ2 790 aa18.36■□□□□ 0.53
PNKP-210ENST00000597965 PARD6AQ9NPB6 346 aa18.36■□□□□ 0.53
PNKP-210ENST00000597965 BLOC1S4Q9NUP1 217 aa18.36■□□□□ 0.53
PNKP-210ENST00000597965 RALGAPA1Q6GYQ0 2036 aa18.35■□□□□ 0.53
PNKP-210ENST00000597965 KPNA7A9QM74 516 aa18.35■□□□□ 0.53
PNKP-210ENST00000597965 K7ESF4 209 aa18.35■□□□□ 0.53
PNKP-210ENST00000597965 HRO43593 1189 aa18.35■□□□□ 0.53
PNKP-210ENST00000597965 SOAT2O75908 522 aa18.35■□□□□ 0.53
PNKP-210ENST00000597965 BFSP1Q12934 665 aa18.35■□□□□ 0.53
PNKP-210ENST00000597965 MCM6Q14566 821 aa18.35■□□□□ 0.53
PNKP-210ENST00000597965 LARP1BQ659C4 914 aaKnown RBP18.35■□□□□ 0.53
PNKP-210ENST00000597965 CC2D1AQ6P1N0 951 aaPredicted RBP18.35■□□□□ 0.53
PNKP-210ENST00000597965 SLC39A4Q6P5W5 647 aa18.35■□□□□ 0.53
PNKP-210ENST00000597965 PRR23CQ6ZRP0 262 aa18.35■□□□□ 0.53
PNKP-210ENST00000597965 WDR5BQ86VZ2 330 aa18.35■□□□□ 0.53
PNKP-210ENST00000597965 TTC9BQ8N6N2 239 aa18.35■□□□□ 0.53
PNKP-210ENST00000597965 POMGNT1Q8WZA1 660 aa18.35■□□□□ 0.53
PNKP-210ENST00000597965 LOXL4Q96JB6 756 aa18.35■□□□□ 0.53
PNKP-210ENST00000597965 ZFYVE19Q96K21 471 aa18.35■□□□□ 0.53
PNKP-210ENST00000597965 TMEM209Q96SK2 561 aa18.35■□□□□ 0.53
PNKP-210ENST00000597965 LPIN3Q9BQK8 851 aa18.35■□□□□ 0.53
PNKP-210ENST00000597965 RBM12Q9NTZ6 932 aaKnown RBP18.35■□□□□ 0.53
PNKP-210ENST00000597965 UXTQ9UBK9 157 aaPredicted RBP18.35■□□□□ 0.53
PNKP-210ENST00000597965 SEL1LQ9UBV2 794 aa18.35■□□□□ 0.53
PNKP-210ENST00000597965 CCDC39Q9UFE4 941 aa18.35■□□□□ 0.53
PNKP-210ENST00000597965 PCDHB5Q9Y5E4 795 aa18.35■□□□□ 0.53
PNKP-210ENST00000597965 TCHHQ07283 1943 aa18.35■□□□□ 0.53
PNKP-210ENST00000597965 TSC2P49815 1807 aa18.35■□□□□ 0.53
PNKP-210ENST00000597965 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.34■□□□□ 0.53
PNKP-210ENST00000597965 DCDC2BA2VCK2 349 aa18.34■□□□□ 0.53
PNKP-210ENST00000597965 LDHAP00338 332 aaKnown RBP18.34■□□□□ 0.53
PNKP-210ENST00000597965 CSH1P0DML2 217 aa18.34■□□□□ 0.53
PNKP-210ENST00000597965 CSH2P0DML3 217 aa18.34■□□□□ 0.53
PNKP-210ENST00000597965 HAPLN1P10915 354 aaPredicted RBP18.34■□□□□ 0.53
PNKP-210ENST00000597965 ATF6P18850 670 aa18.34■□□□□ 0.53
PNKP-210ENST00000597965 NMT1P30419 496 aaKnown RBP18.34■□□□□ 0.53
PNKP-210ENST00000597965 KARSQ15046 597 aaKnown RBP18.34■□□□□ 0.53
PNKP-210ENST00000597965 TXNDC11Q6PKC3 985 aa18.34■□□□□ 0.53
PNKP-210ENST00000597965 Q6ZS52 159 aa18.34■□□□□ 0.53
PNKP-210ENST00000597965 TMEM130Q8N3G9 435 aa18.34■□□□□ 0.53
PNKP-210ENST00000597965 CACTINQ8WUQ7 758 aaKnown RBP18.34■□□□□ 0.53
PNKP-210ENST00000597965 MRPS31Q92665 395 aaKnown RBP18.34■□□□□ 0.53
PNKP-210ENST00000597965 LRRC3BQ96PB8 259 aa18.34■□□□□ 0.53
PNKP-210ENST00000597965 FIZ1Q96SL8 496 aa18.34■□□□□ 0.53
PNKP-210ENST00000597965 ABI2Q9NYB9 513 aaPredicted RBP18.34■□□□□ 0.53
PNKP-210ENST00000597965 STK17AQ9UEE5 414 aa18.34■□□□□ 0.53
PNKP-210ENST00000597965 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.34■□□□□ 0.53
PNKP-210ENST00000597965 SCN1AP35498 2009 aa18.33■□□□□ 0.53
PNKP-210ENST00000597965 ANK1P16157 1881 aa18.33■□□□□ 0.53
PNKP-210ENST00000597965 ANKRD63C9JTQ0 380 aa18.33■□□□□ 0.52
PNKP-210ENST00000597965 PRAMEF12O95522 483 aa18.33■□□□□ 0.52
PNKP-210ENST00000597965 TXLNAP40222 546 aa18.33■□□□□ 0.52
PNKP-210ENST00000597965 CYP4F8P98187 520 aa18.33■□□□□ 0.52
PNKP-210ENST00000597965 RUNX3Q13761 415 aa18.33■□□□□ 0.52
PNKP-210ENST00000597965 C8orf34Q49A92 452 aa18.33■□□□□ 0.52
PNKP-210ENST00000597965 HEATR6Q6AI08 1181 aaKnown RBP18.33■□□□□ 0.52
PNKP-210ENST00000597965 ZNF720Q7Z2F6 126 aa18.33■□□□□ 0.52
PNKP-210ENST00000597965 GPIHBP1Q8IV16 184 aa18.33■□□□□ 0.52
PNKP-210ENST00000597965 TTC8Q8TAM2 541 aa18.33■□□□□ 0.52
PNKP-210ENST00000597965 SLC46A2Q9BY10 475 aa18.33■□□□□ 0.52
PNKP-210ENST00000597965 IL21Q9HBE4 155 aa18.33■□□□□ 0.52
PNKP-210ENST00000597965 ABCB6Q9NP58 842 aa18.33■□□□□ 0.52
PNKP-210ENST00000597965 GKN1Q9NS71 199 aa18.33■□□□□ 0.52
PNKP-210ENST00000597965 TDP1Q9NUW8 608 aa18.33■□□□□ 0.52
PNKP-210ENST00000597965 AKAP3O75969 853 aa18.32■□□□□ 0.52
PNKP-210ENST00000597965 ADRB1P08588 477 aa18.32■□□□□ 0.52
PNKP-210ENST00000597965 GAP43P17677 238 aa18.32■□□□□ 0.52
PNKP-210ENST00000597965 NLRP12P59046 1061 aa18.32■□□□□ 0.52
PNKP-210ENST00000597965 RPL10AP62906 217 aaKnown RBP18.32■□□□□ 0.52
PNKP-210ENST00000597965 TNK2Q07912 1038 aa18.32■□□□□ 0.52
PNKP-210ENST00000597965 FBXO43Q4G163 708 aa18.32■□□□□ 0.52
PNKP-210ENST00000597965 ZC2HC1CQ53FD0 456 aaPredicted RBP18.32■□□□□ 0.52
PNKP-210ENST00000597965 WSCD1Q658N2 575 aa18.32■□□□□ 0.52
PNKP-210ENST00000597965 CACNA2D4Q7Z3S7 1137 aa18.32■□□□□ 0.52
PNKP-210ENST00000597965 TMEM86AQ8N2M4 240 aa18.32■□□□□ 0.52
PNKP-210ENST00000597965 CAMKK1Q8N5S9 505 aa18.32■□□□□ 0.52
PNKP-210ENST00000597965 FAM160A2Q8N612 972 aaPredicted RBP18.32■□□□□ 0.52
PNKP-210ENST00000597965 CCDC26Q8TAB7 109 aa18.32■□□□□ 0.52
PNKP-210ENST00000597965 SPATA18Q8TC71 538 aa18.32■□□□□ 0.52
PNKP-210ENST00000597965 GIPC2Q8TF65 315 aa18.32■□□□□ 0.52
PNKP-210ENST00000597965 LEO1Q8WVC0 666 aaPredicted RBP18.32■□□□□ 0.52
PNKP-210ENST00000597965 CNTNAP3BQ96NU0 1288 aa18.32■□□□□ 0.52
PNKP-210ENST00000597965 FAM83CQ9BQN1 747 aa18.32■□□□□ 0.52
PNKP-210ENST00000597965 ACBD6Q9BR61 282 aa18.32■□□□□ 0.52
PNKP-210ENST00000597965 CNTNAP3Q9BZ76 1288 aa18.32■□□□□ 0.52
PNKP-210ENST00000597965 MRPL44Q9H9J2 332 aaKnown RBP18.32■□□□□ 0.52
PNKP-210ENST00000597965 SLC8A2Q9UPR5 921 aa18.32■□□□□ 0.52
PNKP-210ENST00000597965 SPTBN2O15020 2390 aa18.32■□□□□ 0.52
PNKP-210ENST00000597965 TPRP12270 2363 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms