RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 CACNA2D4Q7Z3S7 1137 aa17.82■□□□□ 0.44
SHKBP1-215ENST00000597649 TMEM150AQ86TG1 271 aa17.82■□□□□ 0.44
SHKBP1-215ENST00000597649 ITIH5Q86UX2 942 aa17.82■□□□□ 0.44
SHKBP1-215ENST00000597649 LRRTM3Q86VH5 581 aa17.82■□□□□ 0.44
SHKBP1-215ENST00000597649 RIN3Q8TB24 985 aa17.82■□□□□ 0.44
SHKBP1-215ENST00000597649 GIPC2Q8TF65 315 aa17.82■□□□□ 0.44
SHKBP1-215ENST00000597649 DDX1Q92499 740 aaKnown RBP17.82■□□□□ 0.44
SHKBP1-215ENST00000597649 LOXL4Q96JB6 756 aa17.82■□□□□ 0.44
SHKBP1-215ENST00000597649 HPS4Q9NQG7 708 aa17.82■□□□□ 0.44
SHKBP1-215ENST00000597649 HSFX1Q9UBD0 423 aa17.82■□□□□ 0.44
SHKBP1-215ENST00000597649 ANGPTL2Q9UKU9 493 aa17.82■□□□□ 0.44
SHKBP1-215ENST00000597649 MTMR6Q9Y217 621 aa17.82■□□□□ 0.44
SHKBP1-215ENST00000597649 CCL26Q9Y258 94 aa17.82■□□□□ 0.44
SHKBP1-215ENST00000597649 ZFYVE26Q68DK2 2539 aa17.82■□□□□ 0.44
SHKBP1-215ENST00000597649 ATG2BQ96BY7 2078 aa17.82■□□□□ 0.44
SHKBP1-215ENST00000597649 SPEGQ15772 3267 aa17.82■□□□□ 0.44
SHKBP1-215ENST00000597649 SPAG17Q6Q759 2223 aa17.82■□□□□ 0.44
SHKBP1-215ENST00000597649 LAD1O00515 517 aa17.81■□□□□ 0.44
SHKBP1-215ENST00000597649 PIRO00625 290 aa17.81■□□□□ 0.44
SHKBP1-215ENST00000597649 RPP40O75818 363 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-215ENST00000597649 EPN2O95208 641 aa17.81■□□□□ 0.44
SHKBP1-215ENST00000597649 ODC1P11926 461 aa17.81■□□□□ 0.44
SHKBP1-215ENST00000597649 PLA2G2CQ5R387 149 aa17.81■□□□□ 0.44
SHKBP1-215ENST00000597649 STPG1Q5TH74 334 aa17.81■□□□□ 0.44
SHKBP1-215ENST00000597649 TRIM68Q6AZZ1 485 aa17.81■□□□□ 0.44
SHKBP1-215ENST00000597649 JADE1Q6IE81 842 aa17.81■□□□□ 0.44
SHKBP1-215ENST00000597649 LRRC15Q8TF66 581 aa17.81■□□□□ 0.44
SHKBP1-215ENST00000597649 KCNN1Q92952 543 aa17.81■□□□□ 0.44
SHKBP1-215ENST00000597649 BICD1Q96G01 975 aa17.81■□□□□ 0.44
SHKBP1-215ENST00000597649 SEPT5Q99719 369 aaPredicted RBP17.81■□□□□ 0.44
SHKBP1-215ENST00000597649 ZCWPW1Q9H0M4 648 aa17.81■□□□□ 0.44
SHKBP1-215ENST00000597649 RPF1Q9H9Y2 349 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-215ENST00000597649 RALYQ9UKM9 306 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-215ENST00000597649 TBX20Q9UMR3 447 aa17.81■□□□□ 0.44
SHKBP1-215ENST00000597649 A0A0B4J269 797 aa17.8■□□□□ 0.44
SHKBP1-215ENST00000597649 CCDC163A0A0D9SF12 145 aa17.8■□□□□ 0.44
SHKBP1-215ENST00000597649 ANO9A1A5B4 782 aa17.8■□□□□ 0.44
SHKBP1-215ENST00000597649 TRDMT1O14717 391 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-215ENST00000597649 OGTO15294 1046 aa17.8■□□□□ 0.44
SHKBP1-215ENST00000597649 CYP11A1P05108 521 aa17.8■□□□□ 0.44
SHKBP1-215ENST00000597649 NFICP08651 508 aa17.8■□□□□ 0.44
SHKBP1-215ENST00000597649 TUFMP49411 452 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-215ENST00000597649 MGAT5BQ3V5L5 792 aa17.8■□□□□ 0.44
SHKBP1-215ENST00000597649 FOXD4L5Q5VV16 416 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-215ENST00000597649 NAIF1Q69YI7 327 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-215ENST00000597649 SLC39A4Q6P5W5 647 aa17.8■□□□□ 0.44
SHKBP1-215ENST00000597649 BRAPQ7Z569 592 aa17.8■□□□□ 0.44
SHKBP1-215ENST00000597649 CMTM8Q8IZV2 173 aa17.8■□□□□ 0.44
SHKBP1-215ENST00000597649 C12orf50Q8NA57 414 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-215ENST00000597649 FOXD4L4Q8WXT5 416 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-215ENST00000597649 FAM212AQ96EL1 285 aa17.8■□□□□ 0.44
SHKBP1-215ENST00000597649 IPO9Q96P70 1041 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-215ENST00000597649 ZSCAN16Q9H4T2 348 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-215ENST00000597649 EBF3Q9H4W6 596 aa17.8■□□□□ 0.44
SHKBP1-215ENST00000597649 THG1LQ9NWX6 298 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-215ENST00000597649 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-215ENST00000597649 WDFY3Q8IZQ1 3526 aa17.8■□□□□ 0.44
SHKBP1-215ENST00000597649 IGF2RP11717 2491 aa17.8■□□□□ 0.44
SHKBP1-215ENST00000597649 ATRXP46100 2492 aa17.8■□□□□ 0.44
SHKBP1-215ENST00000597649 XPOTO43592 962 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-215ENST00000597649 EGFP01133 1207 aa17.79■□□□□ 0.44
SHKBP1-215ENST00000597649 PIGRP01833 764 aa17.79■□□□□ 0.44
SHKBP1-215ENST00000597649 F11P03951 625 aa17.79■□□□□ 0.44
SHKBP1-215ENST00000597649 ZSCAN22P10073 491 aaPredicted RBP17.79■□□□□ 0.44
SHKBP1-215ENST00000597649 HMGA1P17096 107 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-215ENST00000597649 CDC25CP30307 473 aa17.79■□□□□ 0.44
SHKBP1-215ENST00000597649 NMT1P30419 496 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-215ENST00000597649 LIG4P49917 911 aa17.79■□□□□ 0.44
SHKBP1-215ENST00000597649 SHC2P98077 582 aa17.79■□□□□ 0.44
SHKBP1-215ENST00000597649 RUNX3Q13761 415 aa17.79■□□□□ 0.44
SHKBP1-215ENST00000597649 KYAT1Q16773 422 aa17.79■□□□□ 0.44
SHKBP1-215ENST00000597649 TMEM119Q4V9L6 283 aa17.79■□□□□ 0.44
SHKBP1-215ENST00000597649 USP13Q92995 863 aaPredicted RBP17.79■□□□□ 0.44
SHKBP1-215ENST00000597649 TSPAN18Q96SJ8 248 aa17.79■□□□□ 0.44
SHKBP1-215ENST00000597649 CPSF3Q9UKF6 684 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-215ENST00000597649 KIF26AQ9ULI4 1882 aaPredicted RBP17.79■□□□□ 0.44
SHKBP1-215ENST00000597649 FAM208BQ5VWN6 2430 aa17.79■□□□□ 0.44
SHKBP1-215ENST00000597649 GREB1Q4ZG55 1949 aa17.78■□□□□ 0.44
SHKBP1-215ENST00000597649 AKAP13Q12802 2813 aa17.78■□□□□ 0.44
SHKBP1-215ENST00000597649 NUP210Q8TEM1 1887 aaPredicted RBP17.78■□□□□ 0.44
SHKBP1-215ENST00000597649 CYB561D2O14569 222 aa17.78■□□□□ 0.44
SHKBP1-215ENST00000597649 HNRNPDLO14979 420 aaKnown RBP17.78■□□□□ 0.44
SHKBP1-215ENST00000597649 HAPLN1P10915 354 aaPredicted RBP17.78■□□□□ 0.44
SHKBP1-215ENST00000597649 ARSAP15289 507 aa17.78■□□□□ 0.44
SHKBP1-215ENST00000597649 GALK1P51570 392 aa17.78■□□□□ 0.44
SHKBP1-215ENST00000597649 ATP2C1P98194 919 aaPredicted RBP17.78■□□□□ 0.44
SHKBP1-215ENST00000597649 GRSF1Q12849 480 aaKnown RBP eCLIP17.78■□□□□ 0.44
SHKBP1-215ENST00000597649 TXNDC8Q6A555 127 aa17.78■□□□□ 0.44
SHKBP1-215ENST00000597649 TCEAL6Q6IPX3 200 aa17.78■□□□□ 0.44
SHKBP1-215ENST00000597649 MAB21L3Q8N8X9 362 aa17.78■□□□□ 0.44
SHKBP1-215ENST00000597649 TCEAL3Q969E4 200 aa17.78■□□□□ 0.44
SHKBP1-215ENST00000597649 ZC3H10Q96K80 434 aaKnown RBP17.78■□□□□ 0.44
SHKBP1-215ENST00000597649 LSM14BQ9BX40 385 aaKnown RBP17.78■□□□□ 0.44
SHKBP1-215ENST00000597649 KCND2Q9NZV8 630 aa17.78■□□□□ 0.44
SHKBP1-215ENST00000597649 LARSQ9P2J5 1176 aaKnown RBP17.78■□□□□ 0.44
SHKBP1-215ENST00000597649 SLC8A2Q9UPR5 921 aa17.78■□□□□ 0.44
SHKBP1-215ENST00000597649 ANKRD63C9JTQ0 380 aa17.77■□□□□ 0.44
SHKBP1-215ENST00000597649 H0YCG3 227 aa17.77■□□□□ 0.44
SHKBP1-215ENST00000597649 RNF40O75150 1001 aa17.77■□□□□ 0.44
SHKBP1-215ENST00000597649 KCNK5O95279 499 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms