RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 NXF1Q9UBU9 619 aaKnown RBP19.4■□□□□ 0.7
IRF3-216ENST00000597180 DACH1Q9UI36 760 aa19.4■□□□□ 0.7
IRF3-216ENST00000597180 INSL5Q9Y5Q6 135 aa19.4■□□□□ 0.7
IRF3-216ENST00000597180 CCL16O15467 120 aa19.39■□□□□ 0.69
IRF3-216ENST00000597180 XYLBO75191 536 aa19.39■□□□□ 0.69
IRF3-216ENST00000597180 FGFR1OPO95684 399 aaKnown RBP19.39■□□□□ 0.69
IRF3-216ENST00000597180 PCSK1P29120 753 aa19.39■□□□□ 0.69
IRF3-216ENST00000597180 TSPY1Q01534 308 aa19.39■□□□□ 0.69
IRF3-216ENST00000597180 CCDC40Q4G0X9 1142 aa19.39■□□□□ 0.69
IRF3-216ENST00000597180 SLC39A12Q504Y0 691 aa19.39■□□□□ 0.69
IRF3-216ENST00000597180 DCAF17Q5H9S7 520 aaPredicted RBP19.39■□□□□ 0.69
IRF3-216ENST00000597180 CT47A1Q5JQC4 288 aaPredicted RBP19.39■□□□□ 0.69
IRF3-216ENST00000597180 INTS6LQ5JSJ4 861 aaKnown RBP19.39■□□□□ 0.69
IRF3-216ENST00000597180 TCERG1LQ5VWI1 586 aa19.39■□□□□ 0.69
IRF3-216ENST00000597180 DCP1BQ8IZD4 617 aaKnown RBP19.39■□□□□ 0.69
IRF3-216ENST00000597180 C2orf15Q8WU43 125 aaKnown RBP19.39■□□□□ 0.69
IRF3-216ENST00000597180 MRPL45Q9BRJ2 306 aaKnown RBP19.39■□□□□ 0.69
IRF3-216ENST00000597180 CRISPLD1Q9H336 500 aa19.39■□□□□ 0.69
IRF3-216ENST00000597180 PIDD1Q9HB75 910 aa19.39■□□□□ 0.69
IRF3-216ENST00000597180 WDR6Q9NNW5 1121 aaKnown RBP19.39■□□□□ 0.69
IRF3-216ENST00000597180 POLIQ9UNA4 740 aa19.39■□□□□ 0.69
IRF3-216ENST00000597180 LOC730098B7Z3J9 87 aa19.38■□□□□ 0.69
IRF3-216ENST00000597180 HCRTO43612 131 aa19.38■□□□□ 0.69
IRF3-216ENST00000597180 ERCC5P28715 1186 aaPredicted RBP19.38■□□□□ 0.69
IRF3-216ENST00000597180 CBWD6Q4V339 395 aa19.38■□□□□ 0.69
IRF3-216ENST00000597180 CBWD3Q5JTY5 395 aa19.38■□□□□ 0.69
IRF3-216ENST00000597180 CBWD5Q5RIA9 395 aa19.38■□□□□ 0.69
IRF3-216ENST00000597180 ATAD1Q8NBU5 361 aa19.38■□□□□ 0.69
IRF3-216ENST00000597180 FBXL13Q8NEE6 735 aa19.38■□□□□ 0.69
IRF3-216ENST00000597180 IMPG2Q9BZV3 1241 aa19.38■□□□□ 0.69
IRF3-216ENST00000597180 CDH9Q9ULB4 789 aa19.38■□□□□ 0.69
IRF3-216ENST00000597180 COQ4Q9Y3A0 265 aa19.38■□□□□ 0.69
IRF3-216ENST00000597180 NME7Q9Y5B8 376 aa19.38■□□□□ 0.69
IRF3-216ENST00000597180 VCANP13611 3396 aa19.38■□□□□ 0.69
IRF3-216ENST00000597180 A0A0C4DFX4 3053 aa19.38■□□□□ 0.69
IRF3-216ENST00000597180 TTC28Q96AY4 2481 aa19.37■□□□□ 0.69
IRF3-216ENST00000597180 CLUHO75153 1309 aa19.37■□□□□ 0.69
IRF3-216ENST00000597180 LRG1P02750 347 aa19.37■□□□□ 0.69
IRF3-216ENST00000597180 P4HA1P13674 534 aa19.37■□□□□ 0.69
IRF3-216ENST00000597180 ACAT1P24752 427 aaKnown RBP19.37■□□□□ 0.69
IRF3-216ENST00000597180 LMO2P25791 158 aa19.37■□□□□ 0.69
IRF3-216ENST00000597180 NOP14P78316 857 aaKnown RBP19.37■□□□□ 0.69
IRF3-216ENST00000597180 DUSP4Q13115 394 aa19.37■□□□□ 0.69
IRF3-216ENST00000597180 NFE2Q16621 373 aaPredicted RBP19.37■□□□□ 0.69
IRF3-216ENST00000597180 SPOPLQ6IQ16 392 aa19.37■□□□□ 0.69
IRF3-216ENST00000597180 FAM171BQ6P995 826 aa19.37■□□□□ 0.69
IRF3-216ENST00000597180 TRIM59Q8IWR1 403 aa19.37■□□□□ 0.69
IRF3-216ENST00000597180 SPPL2BQ8TCT7 592 aa19.37■□□□□ 0.69
IRF3-216ENST00000597180 SEMA4DQ92854 862 aa19.37■□□□□ 0.69
IRF3-216ENST00000597180 ELMO3Q96BJ8 720 aa19.37■□□□□ 0.69
IRF3-216ENST00000597180 PI4K2AQ9BTU6 479 aa19.37■□□□□ 0.69
IRF3-216ENST00000597180 SNX25Q9H3E2 840 aa19.37■□□□□ 0.69
IRF3-216ENST00000597180 SMYD3Q9H7B4 428 aa19.37■□□□□ 0.69
IRF3-216ENST00000597180 TMLHEQ9NVH6 421 aa19.37■□□□□ 0.69
IRF3-216ENST00000597180 TMEM63CQ9P1W3 806 aa19.37■□□□□ 0.69
IRF3-216ENST00000597180 USTQ9Y2C2 406 aa19.37■□□□□ 0.69
IRF3-216ENST00000597180 YIPF1Q9Y548 306 aa19.37■□□□□ 0.69
IRF3-216ENST00000597180 GREB1Q4ZG55 1949 aa19.37■□□□□ 0.69
IRF3-216ENST00000597180 MYO10Q9HD67 2058 aa19.36■□□□□ 0.69
IRF3-216ENST00000597180 DENND4CQ5VZ89 1909 aa19.36■□□□□ 0.69
IRF3-216ENST00000597180 PMM2O15305 246 aa19.36■□□□□ 0.69
IRF3-216ENST00000597180 CCDC192P0DO97 292 aa19.36■□□□□ 0.69
IRF3-216ENST00000597180 GNL1P36915 607 aaPredicted RBP19.36■□□□□ 0.69
IRF3-216ENST00000597180 ASPAP45381 313 aa19.36■□□□□ 0.69
IRF3-216ENST00000597180 FMO5P49326 533 aa19.36■□□□□ 0.69
IRF3-216ENST00000597180 PLD1Q13393 1074 aa19.36■□□□□ 0.69
IRF3-216ENST00000597180 TTC9BQ8N6N2 239 aa19.36■□□□□ 0.69
IRF3-216ENST00000597180 CCDC150Q8NCX0 1101 aa19.36■□□□□ 0.69
IRF3-216ENST00000597180 FAXDC2Q96IV6 333 aa19.36■□□□□ 0.69
IRF3-216ENST00000597180 SYT15Q9BQS2 421 aa19.36■□□□□ 0.69
IRF3-216ENST00000597180 BCO2Q9BYV7 579 aa19.36■□□□□ 0.69
IRF3-216ENST00000597180 SDCBP2Q9H190 292 aa19.36■□□□□ 0.69
IRF3-216ENST00000597180 APOBEC3GQ9HC16 384 aaKnown RBP19.36■□□□□ 0.69
IRF3-216ENST00000597180 ABCB6Q9NP58 842 aa19.36■□□□□ 0.69
IRF3-216ENST00000597180 CD320Q9NPF0 282 aa19.36■□□□□ 0.69
IRF3-216ENST00000597180 RAB20Q9NX57 234 aa19.36■□□□□ 0.69
IRF3-216ENST00000597180 SLC27A5Q9Y2P5 690 aa19.36■□□□□ 0.69
IRF3-216ENST00000597180 NR2E1Q9Y466 385 aa19.36■□□□□ 0.69
IRF3-216ENST00000597180 PCDHB5Q9Y5E4 795 aa19.36■□□□□ 0.69
IRF3-216ENST00000597180 N4BP1O75113 896 aaKnown RBP19.35■□□□□ 0.69
IRF3-216ENST00000597180 LRRN2O75325 713 aa19.35■□□□□ 0.69
IRF3-216ENST00000597180 CLSTN1O94985 981 aa19.35■□□□□ 0.69
IRF3-216ENST00000597180 TUFMP49411 452 aaKnown RBP19.35■□□□□ 0.69
IRF3-216ENST00000597180 CDH8P55286 799 aa19.35■□□□□ 0.69
IRF3-216ENST00000597180 TWF1Q12792 350 aa19.35■□□□□ 0.69
IRF3-216ENST00000597180 SCARA5Q6ZMJ2 495 aa19.35■□□□□ 0.69
IRF3-216ENST00000597180 GRASPQ7Z6J2 395 aaPredicted RBP19.35■□□□□ 0.69
IRF3-216ENST00000597180 GJD3Q8N144 294 aa19.35■□□□□ 0.69
IRF3-216ENST00000597180 OR6B3Q8NGW1 331 aa19.35■□□□□ 0.69
IRF3-216ENST00000597180 RPGRIP1Q96KN7 1286 aa19.35■□□□□ 0.69
IRF3-216ENST00000597180 NIF3L1Q9GZT8 377 aa19.35■□□□□ 0.69
IRF3-216ENST00000597180 CRTAC1Q9NQ79 661 aa19.35■□□□□ 0.69
IRF3-216ENST00000597180 AVENQ9NQS1 362 aaPredicted RBP19.35■□□□□ 0.69
IRF3-216ENST00000597180 ABI2Q9NYB9 513 aaPredicted RBP19.35■□□□□ 0.69
IRF3-216ENST00000597180 DNMT3BQ9UBC3 853 aaKnown RBP19.35■□□□□ 0.69
IRF3-216ENST00000597180 GTF3C4Q9UKN8 822 aa19.35■□□□□ 0.69
IRF3-216ENST00000597180 MYH10P35580 1976 aa19.34■□□□□ 0.69
IRF3-216ENST00000597180 MYBPHLA2RUH7 354 aa19.34■□□□□ 0.69
IRF3-216ENST00000597180 ATP2C2O75185 946 aa19.34■□□□□ 0.69
IRF3-216ENST00000597180 PDGFRBP09619 1106 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms