RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 CATSPER3Q86XQ3 398 aa16.86■□□□□ 0.29
LIG1-214ENST00000597146 ACDQ96AP0 544 aa16.86■□□□□ 0.29
LIG1-214ENST00000597146 FSCN3Q9NQT6 498 aa16.86■□□□□ 0.29
LIG1-214ENST00000597146 LIMCH1Q9UPQ0 1083 aa16.86■□□□□ 0.29
LIG1-214ENST00000597146 ASB3Q9Y575 518 aa16.86■□□□□ 0.29
LIG1-214ENST00000597146 M0QZQ0 153 aa16.85■□□□□ 0.29
LIG1-214ENST00000597146 LARGE1O95461 756 aa16.85■□□□□ 0.29
LIG1-214ENST00000597146 HARSP12081 509 aaKnown RBP16.85■□□□□ 0.29
LIG1-214ENST00000597146 CYP11B2P19099 503 aa16.85■□□□□ 0.29
LIG1-214ENST00000597146 EFNA5P52803 228 aa16.85■□□□□ 0.29
LIG1-214ENST00000597146 LMAN2Q12907 356 aa16.85■□□□□ 0.29
LIG1-214ENST00000597146 SEMA3BQ13214 749 aa16.85■□□□□ 0.29
LIG1-214ENST00000597146 NR5A1Q13285 461 aa16.85■□□□□ 0.29
LIG1-214ENST00000597146 PPP2R5AQ15172 486 aa16.85■□□□□ 0.29
LIG1-214ENST00000597146 ME3Q16798 604 aa16.85■□□□□ 0.29
LIG1-214ENST00000597146 FBXO43Q4G163 708 aa16.85■□□□□ 0.29
LIG1-214ENST00000597146 C11orf74Q86VG3 221 aa16.85■□□□□ 0.29
LIG1-214ENST00000597146 ADAM32Q8TC27 787 aa16.85■□□□□ 0.29
LIG1-214ENST00000597146 HNRNPLLQ8WVV9 542 aaKnown RBP16.85■□□□□ 0.29
LIG1-214ENST00000597146 ACO2Q99798 780 aaKnown RBP16.85■□□□□ 0.29
LIG1-214ENST00000597146 NUSAP1Q9BXS6 441 aaKnown RBP16.85■□□□□ 0.29
LIG1-214ENST00000597146 PTPRHQ9HD43 1115 aa16.85■□□□□ 0.29
LIG1-214ENST00000597146 TMEM74BQ9NUR3 256 aa16.85■□□□□ 0.29
LIG1-214ENST00000597146 TBX20Q9UMR3 447 aa16.85■□□□□ 0.29
LIG1-214ENST00000597146 PTPRBP23467 1997 aa16.85■□□□□ 0.29
LIG1-214ENST00000597146 HELZP42694 1942 aaKnown RBP16.84■□□□□ 0.29
LIG1-214ENST00000597146 ARHGEF35A5YM69 484 aa16.84■□□□□ 0.29
LIG1-214ENST00000597146 ANTXRLA6NF34 631 aa16.84■□□□□ 0.29
LIG1-214ENST00000597146 ATF6P18850 670 aa16.84■□□□□ 0.29
LIG1-214ENST00000597146 NMT1P30419 496 aaKnown RBP16.84■□□□□ 0.29
LIG1-214ENST00000597146 GJA4P35212 333 aa16.84■□□□□ 0.29
LIG1-214ENST00000597146 RAB44Q7Z6P3 723 aaPredicted RBP16.84■□□□□ 0.29
LIG1-214ENST00000597146 ITIH5Q86UX2 942 aa16.84■□□□□ 0.29
LIG1-214ENST00000597146 RASSF3Q86WH2 238 aa16.84■□□□□ 0.29
LIG1-214ENST00000597146 CMTM8Q8IZV2 173 aa16.84■□□□□ 0.29
LIG1-214ENST00000597146 MDGA1Q8NFP4 955 aa16.84■□□□□ 0.29
LIG1-214ENST00000597146 USP13Q92995 863 aaPredicted RBP16.84■□□□□ 0.29
LIG1-214ENST00000597146 ACAP3Q96P50 834 aa16.84■□□□□ 0.29
LIG1-214ENST00000597146 GCNAQ96QF7 691 aa16.84■□□□□ 0.29
LIG1-214ENST00000597146 SEPT5Q99719 369 aaPredicted RBP16.84■□□□□ 0.29
LIG1-214ENST00000597146 ANKFY1Q9P2R3 1169 aa16.84■□□□□ 0.29
LIG1-214ENST00000597146 MBD1Q9UIS9 605 aaPredicted RBP16.84■□□□□ 0.29
LIG1-214ENST00000597146 PHLPP2Q6ZVD8 1323 aa16.84■□□□□ 0.29
LIG1-214ENST00000597146 STK36Q9NRP7 1315 aa16.84■□□□□ 0.29
LIG1-214ENST00000597146 TCHHQ07283 1943 aa16.84■□□□□ 0.29
LIG1-214ENST00000597146 OR6C75A6NL08 312 aa16.83■□□□□ 0.28
LIG1-214ENST00000597146 EIF4E1BA6NMX2 242 aaKnown RBP16.83■□□□□ 0.28
LIG1-214ENST00000597146 H0Y626 953 aa16.83■□□□□ 0.28
LIG1-214ENST00000597146 K7ERI5 159 aa16.83■□□□□ 0.28
LIG1-214ENST00000597146 ABLIM1O14639 778 aa16.83■□□□□ 0.28
LIG1-214ENST00000597146 TRIM16O95361 564 aa16.83■□□□□ 0.28
LIG1-214ENST00000597146 CDC25CP30307 473 aa16.83■□□□□ 0.28
LIG1-214ENST00000597146 PTGER3P43115 390 aa16.83■□□□□ 0.28
LIG1-214ENST00000597146 FOSBP53539 338 aa16.83■□□□□ 0.28
LIG1-214ENST00000597146 SPAG1Q07617 926 aa16.83■□□□□ 0.28
LIG1-214ENST00000597146 SEZ6Q53EL9 994 aa16.83■□□□□ 0.28
LIG1-214ENST00000597146 USP37Q86T82 979 aa16.83■□□□□ 0.28
LIG1-214ENST00000597146 TTC30AQ86WT1 665 aa16.83■□□□□ 0.28
LIG1-214ENST00000597146 MAB21L3Q8N8X9 362 aa16.83■□□□□ 0.28
LIG1-214ENST00000597146 RLN3Q8WXF3 142 aa16.83■□□□□ 0.28
LIG1-214ENST00000597146 GTF3C6Q969F1 213 aa16.83■□□□□ 0.28
LIG1-214ENST00000597146 IFT74Q96LB3 600 aa16.83■□□□□ 0.28
LIG1-214ENST00000597146 CNOT6LQ96LI5 555 aaKnown RBP16.83■□□□□ 0.28
LIG1-214ENST00000597146 ZSCAN31Q96LW9 406 aaPredicted RBP16.83■□□□□ 0.28
LIG1-214ENST00000597146 TARS2Q9BW92 718 aaKnown RBP16.83■□□□□ 0.28
LIG1-214ENST00000597146 TUFT1Q9NNX1 390 aa16.83■□□□□ 0.28
LIG1-214ENST00000597146 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.82■□□□□ 0.28
LIG1-214ENST00000597146 NEMFO60524 1076 aa16.82■□□□□ 0.28
LIG1-214ENST00000597146 KRT2P35908 639 aa16.82■□□□□ 0.28
LIG1-214ENST00000597146 AVPR1AP37288 418 aa16.82■□□□□ 0.28
LIG1-214ENST00000597146 SEC13P55735 322 aa16.82■□□□□ 0.28
LIG1-214ENST00000597146 AMPD2Q01433 879 aa16.82■□□□□ 0.28
LIG1-214ENST00000597146 BFSP1Q12934 665 aa16.82■□□□□ 0.28
LIG1-214ENST00000597146 SAFBQ15424 915 aaKnown RBP eCLIP16.82■□□□□ 0.28
LIG1-214ENST00000597146 TAS1R3Q7RTX0 852 aa16.82■□□□□ 0.28
LIG1-214ENST00000597146 TMEFF1Q8IYR6 380 aa16.82■□□□□ 0.28
LIG1-214ENST00000597146 FRMD1Q8N878 549 aa16.82■□□□□ 0.28
LIG1-214ENST00000597146 MDM1Q8TC05 714 aa16.82■□□□□ 0.28
LIG1-214ENST00000597146 CD101Q93033 1021 aa16.82■□□□□ 0.28
LIG1-214ENST00000597146 TNFRSF25Q93038 417 aa16.82■□□□□ 0.28
LIG1-214ENST00000597146 LRIG1Q96JA1 1093 aa16.82■□□□□ 0.28
LIG1-214ENST00000597146 NACC1Q96RE7 527 aa16.82■□□□□ 0.28
LIG1-214ENST00000597146 CIZ1Q9ULV3 898 aaPredicted RBP16.82■□□□□ 0.28
LIG1-214ENST00000597146 ASXL3Q9C0F0 2248 aa16.82■□□□□ 0.28
LIG1-214ENST00000597146 CFAP46Q8IYW2 2715 aa16.82■□□□□ 0.28
LIG1-214ENST00000597146 MYH11P35749 1972 aa16.81■□□□□ 0.28
LIG1-214ENST00000597146 SHROOM3Q8TF72 1996 aa16.81■□□□□ 0.28
LIG1-214ENST00000597146 ANAPC1Q9H1A4 1944 aa16.81■□□□□ 0.28
LIG1-214ENST00000597146 UPK3BL1B0FP48 263 aa16.81■□□□□ 0.28
LIG1-214ENST00000597146 UPK3BL2E5RIL1 263 aa16.81■□□□□ 0.28
LIG1-214ENST00000597146 CTDNEP1O95476 244 aa16.81■□□□□ 0.28
LIG1-214ENST00000597146 MCF2P10911 925 aa16.81■□□□□ 0.28
LIG1-214ENST00000597146 VEPH1Q14D04 833 aa16.81■□□□□ 0.28
LIG1-214ENST00000597146 SLC10A6Q3KNW5 377 aa16.81■□□□□ 0.28
LIG1-214ENST00000597146 OVOS1Q6IE37 1185 aa16.81■□□□□ 0.28
LIG1-214ENST00000597146 CC2D1AQ6P1N0 951 aaPredicted RBP16.81■□□□□ 0.28
LIG1-214ENST00000597146 TMEM150AQ86TG1 271 aa16.81■□□□□ 0.28
LIG1-214ENST00000597146 FAM184AQ8NB25 1140 aa16.81■□□□□ 0.28
LIG1-214ENST00000597146 OR2I1PQ8NGU4 316 aa16.81■□□□□ 0.28
LIG1-214ENST00000597146 GIPC2Q8TF65 315 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms