RNA–Protein interactions for RNA: ENST00000596860.1

SNRPA-202, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-202ENST00000596860 SETSIPP0DME0 302 aa9.34□□□□□ -0.91
SNRPA-202ENST00000596860 KRT5P13647 590 aa9.34□□□□□ -0.91
SNRPA-202ENST00000596860 IBSPP21815 317 aaPredicted RBP9.34□□□□□ -0.91
SNRPA-202ENST00000596860 GNA15P30679 374 aa9.34□□□□□ -0.91
SNRPA-202ENST00000596860 CDH5P33151 784 aaPredicted RBP9.34□□□□□ -0.91
SNRPA-202ENST00000596860 CYLC1P35663 651 aaPredicted RBP9.34□□□□□ -0.91
SNRPA-202ENST00000596860 BMPR1AP36894 532 aa9.34□□□□□ -0.91
SNRPA-202ENST00000596860 NDST1P52848 882 aa9.34□□□□□ -0.91
SNRPA-202ENST00000596860 ERVK-21P61565 698 aa9.34□□□□□ -0.91
SNRPA-202ENST00000596860 DSG1Q02413 1049 aa9.34□□□□□ -0.91
SNRPA-202ENST00000596860 YWHAHQ04917 246 aaPredicted RBP9.34□□□□□ -0.91
SNRPA-202ENST00000596860 CNGA2Q16280 664 aa9.34□□□□□ -0.91
SNRPA-202ENST00000596860 NFE2Q16621 373 aaPredicted RBP9.34□□□□□ -0.91
SNRPA-202ENST00000596860 PTPN21Q16825 1174 aa9.34□□□□□ -0.91
SNRPA-202ENST00000596860 ASTE1Q2TB18 679 aaPredicted RBP9.34□□□□□ -0.91
SNRPA-202ENST00000596860 PAN2Q504Q3 1202 aaKnown RBP9.34□□□□□ -0.91
SNRPA-202ENST00000596860 C9orf50Q5SZB4 431 aa9.34□□□□□ -0.91
SNRPA-202ENST00000596860 SPOUT1Q5T280 376 aaKnown RBP9.34□□□□□ -0.91
SNRPA-202ENST00000596860 WSCD1Q658N2 575 aa9.34□□□□□ -0.91
SNRPA-202ENST00000596860 SCARA3Q6AZY7 606 aa9.34□□□□□ -0.91
SNRPA-202ENST00000596860 OVOS1Q6IE37 1185 aa9.34□□□□□ -0.91
SNRPA-202ENST00000596860 FAM171BQ6P995 826 aa9.34□□□□□ -0.91
SNRPA-202ENST00000596860 LCLAT1Q6UWP7 414 aa9.34□□□□□ -0.91
SNRPA-202ENST00000596860 TMEM139Q8IV31 216 aa9.34□□□□□ -0.91
SNRPA-202ENST00000596860 TDHQ8IZJ6 230 aa9.34□□□□□ -0.91
SNRPA-202ENST00000596860 SLC4A11Q8NBS3 891 aa9.34□□□□□ -0.91
SNRPA-202ENST00000596860 OR6B3Q8NGW1 331 aa9.34□□□□□ -0.91
SNRPA-202ENST00000596860 DDX1Q92499 740 aaKnown RBP9.34□□□□□ -0.91
SNRPA-202ENST00000596860 FUBP3Q96I24 572 aaKnown RBP eCLIP9.34□□□□□ -0.91
SNRPA-202ENST00000596860 CEP295NLQ96MC4 621 aa9.34□□□□□ -0.91
SNRPA-202ENST00000596860 MRPL45Q9BRJ2 306 aaKnown RBP9.34□□□□□ -0.91
SNRPA-202ENST00000596860 TTPALQ9BTX7 342 aa9.34□□□□□ -0.91
SNRPA-202ENST00000596860 LMAN2LQ9H0V9 348 aa9.34□□□□□ -0.91
SNRPA-202ENST00000596860 LHX5Q9H2C1 402 aa9.34□□□□□ -0.91
SNRPA-202ENST00000596860 LUC7LQ9NQ29 371 aaKnown RBP9.34□□□□□ -0.91
SNRPA-202ENST00000596860 CYLDQ9NQC7 956 aa9.34□□□□□ -0.91
SNRPA-202ENST00000596860 FNIP2Q9P278 1114 aa9.34□□□□□ -0.91
SNRPA-202ENST00000596860 NOCTQ9UK39 431 aaKnown RBP9.34□□□□□ -0.91
SNRPA-202ENST00000596860 TMEM265A0A087WTH1 108 aa9.33□□□□□ -0.92
SNRPA-202ENST00000596860 LINC01553A4QN01 128 aa9.33□□□□□ -0.92
SNRPA-202ENST00000596860 A8MXQ7 604 aa9.33□□□□□ -0.92
SNRPA-202ENST00000596860 EIF3CLB5ME19 914 aaKnown RBP9.33□□□□□ -0.92
SNRPA-202ENST00000596860 DLL1O00548 723 aa9.33□□□□□ -0.92
SNRPA-202ENST00000596860 CYP26A1O43174 497 aa9.33□□□□□ -0.92
SNRPA-202ENST00000596860 ITGB1P05556 798 aa9.33□□□□□ -0.92
SNRPA-202ENST00000596860 CD58P19256 250 aa9.33□□□□□ -0.92
SNRPA-202ENST00000596860 BRCC3P46736 316 aa9.33□□□□□ -0.92
SNRPA-202ENST00000596860 CDH8P55286 799 aa9.33□□□□□ -0.92
SNRPA-202ENST00000596860 SMAD3P84022 425 aaKnown RBP9.33□□□□□ -0.92
SNRPA-202ENST00000596860 CCZ1BP86790 482 aa9.33□□□□□ -0.92
SNRPA-202ENST00000596860 CCZ1P86791 482 aaPredicted RBP9.33□□□□□ -0.92
SNRPA-202ENST00000596860 TSPY1Q01534 308 aa9.33□□□□□ -0.92
SNRPA-202ENST00000596860 SLC18A3Q16572 532 aa9.33□□□□□ -0.92
SNRPA-202ENST00000596860 SGO2Q562F6 1265 aa9.33□□□□□ -0.92
SNRPA-202ENST00000596860 INTS6LQ5JSJ4 861 aaKnown RBP9.33□□□□□ -0.92
SNRPA-202ENST00000596860 VARS2Q5ST30 1063 aaKnown RBP9.33□□□□□ -0.92
SNRPA-202ENST00000596860 FAM171A1Q5VUB5 890 aa9.33□□□□□ -0.92
SNRPA-202ENST00000596860 E4F1Q66K89 784 aaPredicted RBP9.33□□□□□ -0.92
SNRPA-202ENST00000596860 FAM117BQ6P1L5 589 aa9.33□□□□□ -0.92
SNRPA-202ENST00000596860 SCARA5Q6ZMJ2 495 aa9.33□□□□□ -0.92
SNRPA-202ENST00000596860 ZNF662Q6ZS27 426 aa9.33□□□□□ -0.92
SNRPA-202ENST00000596860 RTL10Q7L3V2 364 aa9.33□□□□□ -0.92
SNRPA-202ENST00000596860 OSTM1Q86WC4 334 aa9.33□□□□□ -0.92
SNRPA-202ENST00000596860 DCP1BQ8IZD4 617 aaKnown RBP9.33□□□□□ -0.92
SNRPA-202ENST00000596860 B3GALNT2Q8NCR0 500 aa9.33□□□□□ -0.92
SNRPA-202ENST00000596860 MYCBPAPQ8TBZ2 947 aa9.33□□□□□ -0.92
SNRPA-202ENST00000596860 ZNF606Q8WXB4 792 aa9.33□□□□□ -0.92
SNRPA-202ENST00000596860 VCPIP1Q96JH7 1222 aa9.33□□□□□ -0.92
SNRPA-202ENST00000596860 CALR3Q96L12 384 aaKnown RBP9.33□□□□□ -0.92
SNRPA-202ENST00000596860 CCDC42Q96M95 316 aa9.33□□□□□ -0.92
SNRPA-202ENST00000596860 TGS1Q96RS0 853 aaKnown RBP9.33□□□□□ -0.92
SNRPA-202ENST00000596860 EIF3CQ99613 913 aaKnown RBP9.33□□□□□ -0.92
SNRPA-202ENST00000596860 HNRNPABQ99729 332 aaKnown RBP9.33□□□□□ -0.92
SNRPA-202ENST00000596860 AGPAT1Q99943 283 aa9.33□□□□□ -0.92
SNRPA-202ENST00000596860 C11orf84Q9BUA3 381 aaPredicted RBP9.33□□□□□ -0.92
SNRPA-202ENST00000596860 GPR62Q9BZJ7 368 aa9.33□□□□□ -0.92
SNRPA-202ENST00000596860 UBXN6Q9BZV1 441 aa9.33□□□□□ -0.92
SNRPA-202ENST00000596860 ELOVL4Q9GZR5 314 aa9.33□□□□□ -0.92
SNRPA-202ENST00000596860 MIS12Q9H081 205 aa9.33□□□□□ -0.92
SNRPA-202ENST00000596860 HAUS4Q9H6D7 363 aa9.33□□□□□ -0.92
SNRPA-202ENST00000596860 NHEJ1Q9H9Q4 299 aaPredicted RBP9.33□□□□□ -0.92
SNRPA-202ENST00000596860 RXFP1Q9HBX9 757 aa9.33□□□□□ -0.92
SNRPA-202ENST00000596860 ABCB6Q9NP58 842 aa9.33□□□□□ -0.92
SNRPA-202ENST00000596860 DDX43Q9NXZ2 648 aaKnown RBP9.33□□□□□ -0.92
SNRPA-202ENST00000596860 ARHGAP20Q9P2F6 1191 aa9.33□□□□□ -0.92
SNRPA-202ENST00000596860 MTRRQ9UBK8 725 aa9.33□□□□□ -0.92
SNRPA-202ENST00000596860 PUF60Q9UHX1 559 aaKnown RBP9.33□□□□□ -0.92
SNRPA-202ENST00000596860 MSRAQ9UJ68 235 aa9.33□□□□□ -0.92
SNRPA-202ENST00000596860 INTUQ9ULD6 942 aa9.33□□□□□ -0.92
SNRPA-202ENST00000596860 CEP83Q9Y592 693 aa9.33□□□□□ -0.92
SNRPA-202ENST00000596860 MYH10P35580 1976 aa9.33□□□□□ -0.92
SNRPA-202ENST00000596860 MTCL1Q9Y4B5 1905 aaKnown RBP9.33□□□□□ -0.92
SNRPA-202ENST00000596860 PLXNA4Q9HCM2 1894 aa9.32□□□□□ -0.92
SNRPA-202ENST00000596860 O00370 1275 aa9.32□□□□□ -0.92
SNRPA-202ENST00000596860 CCP110O43303 1012 aa9.32□□□□□ -0.92
SNRPA-202ENST00000596860 FGF18O76093 207 aa9.32□□□□□ -0.92
SNRPA-202ENST00000596860 IPO7O95373 1038 aaKnown RBP9.32□□□□□ -0.92
SNRPA-202ENST00000596860 CYP1A1P04798 512 aaPredicted RBP9.32□□□□□ -0.92
SNRPA-202ENST00000596860 URODP06132 367 aa9.32□□□□□ -0.92
SNRPA-202ENST00000596860 CTSAP10619 480 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms