RNA–Protein interactions for RNA: ENST00000596788.1

IRF3-214, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-214ENST00000596788 SLC20A1Q8WUM9 679 aa22.23■■□□□ 1.15
IRF3-214ENST00000596788 TMEM176AQ96HP8 235 aa22.23■■□□□ 1.15
IRF3-214ENST00000596788 ZNHIT6Q9NWK9 470 aaKnown RBP22.23■■□□□ 1.15
IRF3-214ENST00000596788 ARHGAP20Q9P2F6 1191 aa22.23■■□□□ 1.15
IRF3-214ENST00000596788 NOCTQ9UK39 431 aaKnown RBP22.23■■□□□ 1.15
IRF3-214ENST00000596788 COL4A4P53420 1690 aaPredicted RBP22.23■■□□□ 1.15
IRF3-214ENST00000596788 OAZ2O95190 189 aa22.22■■□□□ 1.15
IRF3-214ENST00000596788 SOD2P04179 222 aa22.22■■□□□ 1.15
IRF3-214ENST00000596788 SERPING1P05155 500 aa22.22■■□□□ 1.15
IRF3-214ENST00000596788 BRD2P25440 801 aaKnown RBP22.22■■□□□ 1.15
IRF3-214ENST00000596788 GNA15P30679 374 aa22.22■■□□□ 1.15
IRF3-214ENST00000596788 PDE6CP51160 858 aa22.22■■□□□ 1.15
IRF3-214ENST00000596788 PSMC1P62191 440 aaKnown RBP22.22■■□□□ 1.15
IRF3-214ENST00000596788 PLCB3Q01970 1234 aa22.22■■□□□ 1.15
IRF3-214ENST00000596788 TAP1Q03518 808 aa22.22■■□□□ 1.15
IRF3-214ENST00000596788 PTK2Q05397 1052 aa22.22■■□□□ 1.15
IRF3-214ENST00000596788 KLHL30Q0D2K2 578 aa22.22■■□□□ 1.15
IRF3-214ENST00000596788 RAB30Q15771 203 aa22.22■■□□□ 1.15
IRF3-214ENST00000596788 CCDC142Q17RM4 750 aa22.22■■□□□ 1.15
IRF3-214ENST00000596788 TDRD12Q587J7 1177 aaKnown RBP22.22■■□□□ 1.15
IRF3-214ENST00000596788 LRRC8AQ8IWT6 810 aa22.22■■□□□ 1.15
IRF3-214ENST00000596788 OR10T2Q8NGX3 314 aa22.22■■□□□ 1.15
IRF3-214ENST00000596788 OLIG1Q8TAK6 271 aa22.22■■□□□ 1.15
IRF3-214ENST00000596788 CHP1Q99653 195 aa22.22■■□□□ 1.15
IRF3-214ENST00000596788 LPIN3Q9BQK8 851 aa22.22■■□□□ 1.15
IRF3-214ENST00000596788 SYT15Q9BQS2 421 aa22.22■■□□□ 1.15
IRF3-214ENST00000596788 ZSWIM1Q9BR11 485 aa22.22■■□□□ 1.15
IRF3-214ENST00000596788 SYT11Q9BT88 431 aa22.22■■□□□ 1.15
IRF3-214ENST00000596788 TTPALQ9BTX7 342 aa22.22■■□□□ 1.15
IRF3-214ENST00000596788 NKX2-4Q9H2Z4 354 aa22.22■■□□□ 1.15
IRF3-214ENST00000596788 PTPRDP23468 1912 aa22.21■■□□□ 1.15
IRF3-214ENST00000596788 C5orf67F2Z3F1 127 aa22.21■■□□□ 1.15
IRF3-214ENST00000596788 ATP2C2O75185 946 aa22.21■■□□□ 1.15
IRF3-214ENST00000596788 CCDC172P0C7W6 258 aa22.21■■□□□ 1.15
IRF3-214ENST00000596788 BPIFB4P59827 614 aa22.21■■□□□ 1.15
IRF3-214ENST00000596788 CDK17Q00537 523 aa22.21■■□□□ 1.15
IRF3-214ENST00000596788 MRPL58Q14197 206 aaKnown RBP22.21■■□□□ 1.15
IRF3-214ENST00000596788 USP41Q3LFD5 358 aa22.21■■□□□ 1.15
IRF3-214ENST00000596788 TFAP2BQ92481 460 aa22.21■■□□□ 1.15
IRF3-214ENST00000596788 DDX1Q92499 740 aaKnown RBP22.21■■□□□ 1.15
IRF3-214ENST00000596788 BAG1Q99933 345 aaPredicted RBP22.21■■□□□ 1.15
IRF3-214ENST00000596788 PLVAPQ9BX97 442 aa22.21■■□□□ 1.15
IRF3-214ENST00000596788 KCNF1Q9H3M0 494 aa22.21■■□□□ 1.15
IRF3-214ENST00000596788 HAUS4Q9H6D7 363 aa22.21■■□□□ 1.15
IRF3-214ENST00000596788 CHST7Q9NS84 486 aa22.21■■□□□ 1.15
IRF3-214ENST00000596788 PUF60Q9UHX1 559 aaKnown RBP22.21■■□□□ 1.15
IRF3-214ENST00000596788 MTUS1Q9ULD2 1270 aa22.21■■□□□ 1.15
IRF3-214ENST00000596788 ATG2AQ2TAZ0 1938 aa22.21■■□□□ 1.15
IRF3-214ENST00000596788 CD19P15391 556 aa22.2■■□□□ 1.14
IRF3-214ENST00000596788 PCSK1P29120 753 aa22.2■■□□□ 1.14
IRF3-214ENST00000596788 GLUD2P49448 558 aa22.2■■□□□ 1.14
IRF3-214ENST00000596788 CCZ1BP86790 482 aa22.2■■□□□ 1.14
IRF3-214ENST00000596788 CCZ1P86791 482 aaPredicted RBP22.2■■□□□ 1.14
IRF3-214ENST00000596788 INTS6LQ5JSJ4 861 aaKnown RBP22.2■■□□□ 1.14
IRF3-214ENST00000596788 TAF3Q5VWG9 929 aa22.2■■□□□ 1.14
IRF3-214ENST00000596788 ZNF280DQ6N043 979 aa22.2■■□□□ 1.14
IRF3-214ENST00000596788 PRSS55Q6UWB4 352 aaPredicted RBP22.2■■□□□ 1.14
IRF3-214ENST00000596788 ZNF571Q7Z3V5 609 aaPredicted RBP22.2■■□□□ 1.14
IRF3-214ENST00000596788 CRYBG2Q8N1P7 616 aa22.2■■□□□ 1.14
IRF3-214ENST00000596788 THEM5Q8N1Q8 247 aa22.2■■□□□ 1.14
IRF3-214ENST00000596788 B3GALNT2Q8NCR0 500 aa22.2■■□□□ 1.14
IRF3-214ENST00000596788 TGS1Q96RS0 853 aaKnown RBP22.2■■□□□ 1.14
IRF3-214ENST00000596788 TMEM209Q96SK2 561 aa22.2■■□□□ 1.14
IRF3-214ENST00000596788 CRTAC1Q9NQ79 661 aa22.2■■□□□ 1.14
IRF3-214ENST00000596788 MSRAQ9UJ68 235 aa22.2■■□□□ 1.14
IRF3-214ENST00000596788 CDH9Q9ULB4 789 aa22.2■■□□□ 1.14
IRF3-214ENST00000596788 THAP12O43422 761 aa22.19■■□□□ 1.14
IRF3-214ENST00000596788 CHRNB2P17787 502 aa22.19■■□□□ 1.14
IRF3-214ENST00000596788 EIF4A3P38919 411 aaKnown RBP22.19■■□□□ 1.14
IRF3-214ENST00000596788 ERVK-21P61565 698 aa22.19■■□□□ 1.14
IRF3-214ENST00000596788 DSG1Q02413 1049 aa22.19■■□□□ 1.14
IRF3-214ENST00000596788 KRT17Q04695 432 aa22.19■■□□□ 1.14
IRF3-214ENST00000596788 CTXN3Q4LDR2 81 aa22.19■■□□□ 1.14
IRF3-214ENST00000596788 ANKS3Q6ZW76 656 aa22.19■■□□□ 1.14
IRF3-214ENST00000596788 VPS52Q8N1B4 723 aa22.19■■□□□ 1.14
IRF3-214ENST00000596788 C12orf29Q8N999 325 aa22.19■■□□□ 1.14
IRF3-214ENST00000596788 RIN2Q8WYP3 895 aaPredicted RBP22.19■■□□□ 1.14
IRF3-214ENST00000596788 PIK3R5Q8WYR1 880 aa22.19■■□□□ 1.14
IRF3-214ENST00000596788 TNIP3Q96KP6 325 aa22.19■■□□□ 1.14
IRF3-214ENST00000596788 HEXIM2Q96MH2 286 aaKnown RBP22.19■■□□□ 1.14
IRF3-214ENST00000596788 SAMD11Q96NU1 681 aa22.19■■□□□ 1.14
IRF3-214ENST00000596788 PKMYT1Q99640 499 aa22.19■■□□□ 1.14
IRF3-214ENST00000596788 ACBD6Q9BR61 282 aa22.19■■□□□ 1.14
IRF3-214ENST00000596788 ZBP1Q9H171 429 aa22.19■■□□□ 1.14
IRF3-214ENST00000596788 FAM49BQ9NUQ9 324 aa22.19■■□□□ 1.14
IRF3-214ENST00000596788 BZW2Q9Y6E2 419 aaKnown RBP22.19■■□□□ 1.14
IRF3-214ENST00000596788 SOWAHDA6NJG2 315 aa22.18■■□□□ 1.14
IRF3-214ENST00000596788 TBC1D4O60343 1298 aa22.18■■□□□ 1.14
IRF3-214ENST00000596788 URODP06132 367 aa22.18■■□□□ 1.14
IRF3-214ENST00000596788 MMEP08473 750 aa22.18■■□□□ 1.14
IRF3-214ENST00000596788 VDRP11473 427 aa22.18■■□□□ 1.14
IRF3-214ENST00000596788 CCDC130P13994 396 aa22.18■■□□□ 1.14
IRF3-214ENST00000596788 PTPN1P18031 435 aaKnown RBP22.18■■□□□ 1.14
IRF3-214ENST00000596788 SSTR3P32745 418 aaPredicted RBP22.18■■□□□ 1.14
IRF3-214ENST00000596788 CDR2Q01850 454 aa22.18■■□□□ 1.14
IRF3-214ENST00000596788 MAPK8IP2Q13387 824 aaPredicted RBP22.18■■□□□ 1.14
IRF3-214ENST00000596788 PSMD5Q16401 504 aa22.18■■□□□ 1.14
IRF3-214ENST00000596788 SGO2Q562F6 1265 aa22.18■■□□□ 1.14
IRF3-214ENST00000596788 MDH1BQ5I0G3 518 aa22.18■■□□□ 1.14
IRF3-214ENST00000596788 PPP2R2DQ66LE6 453 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms