RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 APPL2Q8NEU8 664 aa17.23■□□□□ 0.35
USHBP1-205ENST00000595993 SAAL1Q96ER3 474 aa17.23■□□□□ 0.35
USHBP1-205ENST00000595993 LRRC3Q9BY71 257 aa17.23■□□□□ 0.35
USHBP1-205ENST00000595993 LACTBL1A8MY62 500 aa17.22■□□□□ 0.35
USHBP1-205ENST00000595993 TGFB1I1O43294 461 aa17.22■□□□□ 0.35
USHBP1-205ENST00000595993 ADRB2P07550 413 aa17.22■□□□□ 0.35
USHBP1-205ENST00000595993 GARTP22102 1010 aa17.22■□□□□ 0.35
USHBP1-205ENST00000595993 LRPAP1P30533 357 aa17.22■□□□□ 0.35
USHBP1-205ENST00000595993 WNT7BP56706 349 aa17.22■□□□□ 0.35
USHBP1-205ENST00000595993 LMNB2Q03252 620 aa17.22■□□□□ 0.35
USHBP1-205ENST00000595993 TWF1Q12792 350 aa17.22■□□□□ 0.35
USHBP1-205ENST00000595993 ZBTB6Q15916 424 aa17.22■□□□□ 0.35
USHBP1-205ENST00000595993 KYAT1Q16773 422 aa17.22■□□□□ 0.35
USHBP1-205ENST00000595993 IQCEQ6IPM2 695 aa17.22■□□□□ 0.35
USHBP1-205ENST00000595993 RNF19BQ6ZMZ0 732 aa17.22■□□□□ 0.35
USHBP1-205ENST00000595993 MFSD6LQ8IWD5 586 aa17.22■□□□□ 0.35
USHBP1-205ENST00000595993 ERCC4Q92889 916 aaPredicted RBP17.22■□□□□ 0.35
USHBP1-205ENST00000595993 ZNF512Q96ME7 567 aaPredicted RBP17.22■□□□□ 0.35
USHBP1-205ENST00000595993 OXCT2Q9BYC2 517 aaPredicted RBP17.22■□□□□ 0.35
USHBP1-205ENST00000595993 PCIF1Q9H4Z3 704 aa17.22■□□□□ 0.35
USHBP1-205ENST00000595993 RPF1Q9H9Y2 349 aaKnown RBP17.22■□□□□ 0.35
USHBP1-205ENST00000595993 TUBGCP4Q9UGJ1 667 aa17.22■□□□□ 0.35
USHBP1-205ENST00000595993 GOLGA8IPA6NC78 632 aa17.21■□□□□ 0.35
USHBP1-205ENST00000595993 GOLGA8JA6NMD2 632 aa17.21■□□□□ 0.35
USHBP1-205ENST00000595993 PRR5-ARHGAP8B1AHC4 643 aa17.21■□□□□ 0.35
USHBP1-205ENST00000595993 RHOBTB3O94955 611 aa17.21■□□□□ 0.35
USHBP1-205ENST00000595993 CHRNB1P11230 501 aa17.21■□□□□ 0.35
USHBP1-205ENST00000595993 GDI1P31150 447 aa17.21■□□□□ 0.35
USHBP1-205ENST00000595993 MCM4P33991 863 aa17.21■□□□□ 0.35
USHBP1-205ENST00000595993 NRLP54845 237 aa17.21■□□□□ 0.35
USHBP1-205ENST00000595993 ARHGAP8P85298 464 aa17.21■□□□□ 0.35
USHBP1-205ENST00000595993 PPP2R3AQ06190 1150 aa17.21■□□□□ 0.35
USHBP1-205ENST00000595993 ARMCX5Q6P1M9 558 aa17.21■□□□□ 0.35
USHBP1-205ENST00000595993 CLEC17AQ6ZS10 378 aa17.21■□□□□ 0.35
USHBP1-205ENST00000595993 TMC8Q8IU68 726 aa17.21■□□□□ 0.35
USHBP1-205ENST00000595993 ELMOD1Q8N336 334 aa17.21■□□□□ 0.35
USHBP1-205ENST00000595993 SHKBP1Q8TBC3 707 aa17.21■□□□□ 0.35
USHBP1-205ENST00000595993 ZSCAN18Q8TBC5 510 aaPredicted RBP17.21■□□□□ 0.35
USHBP1-205ENST00000595993 FAM3CQ92520 227 aa17.21■□□□□ 0.35
USHBP1-205ENST00000595993 SECISBP2LQ93073 1101 aaKnown RBP17.21■□□□□ 0.35
USHBP1-205ENST00000595993 KIF12Q96FN5 646 aa17.21■□□□□ 0.35
USHBP1-205ENST00000595993 TIGD1Q96MW7 591 aa17.21■□□□□ 0.35
USHBP1-205ENST00000595993 FAM213AQ9BRX8 229 aa17.21■□□□□ 0.35
USHBP1-205ENST00000595993 GPR88Q9GZN0 384 aa17.21■□□□□ 0.35
USHBP1-205ENST00000595993 PLEKHA5Q9HAU0 1116 aa17.21■□□□□ 0.35
USHBP1-205ENST00000595993 PARD6AQ9NPB6 346 aa17.21■□□□□ 0.35
USHBP1-205ENST00000595993 ASAH2Q9NR71 780 aa17.21■□□□□ 0.35
USHBP1-205ENST00000595993 AGPAT3Q9NRZ7 376 aa17.21■□□□□ 0.35
USHBP1-205ENST00000595993 NDRG2Q9UN36 371 aaKnown RBP17.21■□□□□ 0.35
USHBP1-205ENST00000595993 YIPF1Q9Y548 306 aa17.21■□□□□ 0.35
USHBP1-205ENST00000595993 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.21■□□□□ 0.35
USHBP1-205ENST00000595993 PIAS3Q9Y6X2 628 aa17.21■□□□□ 0.35
USHBP1-205ENST00000595993 NUP210Q8TEM1 1887 aaPredicted RBP17.2■□□□□ 0.34
USHBP1-205ENST00000595993 TSC2P49815 1807 aa17.2■□□□□ 0.34
USHBP1-205ENST00000595993 PRPF40AO75400 957 aaKnown RBP17.2■□□□□ 0.34
USHBP1-205ENST00000595993 NFICP08651 508 aa17.2■□□□□ 0.34
USHBP1-205ENST00000595993 VIPR2P41587 438 aa17.2■□□□□ 0.34
USHBP1-205ENST00000595993 GUCY2FP51841 1108 aa17.2■□□□□ 0.34
USHBP1-205ENST00000595993 ATXN1P54253 815 aaKnown RBP17.2■□□□□ 0.34
USHBP1-205ENST00000595993 FCHO2Q0JRZ9 810 aa17.2■□□□□ 0.34
USHBP1-205ENST00000595993 PSMD2Q13200 908 aa17.2■□□□□ 0.34
USHBP1-205ENST00000595993 GAS6Q14393 721 aa17.2■□□□□ 0.34
USHBP1-205ENST00000595993 JADE1Q6IE81 842 aa17.2■□□□□ 0.34
USHBP1-205ENST00000595993 E2F7Q96AV8 911 aa17.2■□□□□ 0.34
USHBP1-205ENST00000595993 RSPRY1Q96DX4 576 aa17.2■□□□□ 0.34
USHBP1-205ENST00000595993 FAM212AQ96EL1 285 aa17.2■□□□□ 0.34
USHBP1-205ENST00000595993 MSANTD3Q96H12 275 aa17.2■□□□□ 0.34
USHBP1-205ENST00000595993 DNAJC25Q9H1X3 360 aa17.2■□□□□ 0.34
USHBP1-205ENST00000595993 CRISPLD1Q9H336 500 aa17.2■□□□□ 0.34
USHBP1-205ENST00000595993 PAPSS2O95340 614 aaPredicted RBP17.19■□□□□ 0.34
USHBP1-205ENST00000595993 CPB1P15086 417 aa17.19■□□□□ 0.34
USHBP1-205ENST00000595993 GJA1P17302 382 aa17.19■□□□□ 0.34
USHBP1-205ENST00000595993 CYP3A5P20815 502 aa17.19■□□□□ 0.34
USHBP1-205ENST00000595993 CCR3P51677 355 aa17.19■□□□□ 0.34
USHBP1-205ENST00000595993 UBE2HP62256 183 aa17.19■□□□□ 0.34
USHBP1-205ENST00000595993 YWHAHQ04917 246 aaPredicted RBP17.19■□□□□ 0.34
USHBP1-205ENST00000595993 KCNB1Q14721 858 aa17.19■□□□□ 0.34
USHBP1-205ENST00000595993 TEAD2Q15562 447 aa17.19■□□□□ 0.34
USHBP1-205ENST00000595993 KNOP1Q1ED39 458 aaKnown RBP17.19■□□□□ 0.34
USHBP1-205ENST00000595993 C1orf228Q6PIY5 440 aa17.19■□□□□ 0.34
USHBP1-205ENST00000595993 CELF5Q8N6W0 485 aaKnown RBP17.19■□□□□ 0.34
USHBP1-205ENST00000595993 MKNK1Q9BUB5 465 aa17.19■□□□□ 0.34
USHBP1-205ENST00000595993 LMAN1LQ9HAT1 526 aa17.19■□□□□ 0.34
USHBP1-205ENST00000595993 KIF26AQ9ULI4 1882 aaPredicted RBP17.18■□□□□ 0.34
USHBP1-205ENST00000595993 ACACBO00763 2458 aa17.18■□□□□ 0.34
USHBP1-205ENST00000595993 HEPACAM2A8MVW5 462 aa17.18■□□□□ 0.34
USHBP1-205ENST00000595993 ZNF263O14978 683 aa17.18■□□□□ 0.34
USHBP1-205ENST00000595993 CLIC2O15247 247 aa17.18■□□□□ 0.34
USHBP1-205ENST00000595993 CHADO15335 359 aa17.18■□□□□ 0.34
USHBP1-205ENST00000595993 EXTL3O43909 919 aa17.18■□□□□ 0.34
USHBP1-205ENST00000595993 MYL4P12829 197 aa17.18■□□□□ 0.34
USHBP1-205ENST00000595993 GPR17Q13304 367 aa17.18■□□□□ 0.34
USHBP1-205ENST00000595993 PPP2R5DQ14738 602 aa17.18■□□□□ 0.34
USHBP1-205ENST00000595993 WDR44Q5JSH3 913 aa17.18■□□□□ 0.34
USHBP1-205ENST00000595993 LAIR1Q6GTX8 287 aa17.18■□□□□ 0.34
USHBP1-205ENST00000595993 BRSK2Q8IWQ3 736 aa17.18■□□□□ 0.34
USHBP1-205ENST00000595993 EFCAB13Q8IY85 973 aa17.18■□□□□ 0.34
USHBP1-205ENST00000595993 SMYD4Q8IYR2 804 aaPredicted RBP17.18■□□□□ 0.34
USHBP1-205ENST00000595993 GPD1LQ8N335 351 aa17.18■□□□□ 0.34
USHBP1-205ENST00000595993 SPATA20Q8TB22 786 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms