RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 ZNF699Q32M78 642 aa16.48■□□□□ 0.23
USE1-206ENST00000595101 DCAF17Q5H9S7 520 aaPredicted RBP16.48■□□□□ 0.23
USE1-206ENST00000595101 TCERG1LQ5VWI1 586 aa16.48■□□□□ 0.23
USE1-206ENST00000595101 PKMYT1Q99640 499 aa16.48■□□□□ 0.23
USE1-206ENST00000595101 SRRTQ9BXP5 876 aaKnown RBP16.48■□□□□ 0.23
USE1-206ENST00000595101 APOBEC3GQ9HC16 384 aaKnown RBP16.48■□□□□ 0.23
USE1-206ENST00000595101 WDR6Q9NNW5 1121 aaKnown RBP16.48■□□□□ 0.23
USE1-206ENST00000595101 CEP72Q9P209 647 aa16.48■□□□□ 0.23
USE1-206ENST00000595101 GTF3C4Q9UKN8 822 aa16.48■□□□□ 0.23
USE1-206ENST00000595101 NCOR1O75376 2440 aa16.47■□□□□ 0.23
USE1-206ENST00000595101 ARHGEF37A1IGU5 675 aa16.47■□□□□ 0.23
USE1-206ENST00000595101 MYBPHLA2RUH7 354 aa16.47■□□□□ 0.23
USE1-206ENST00000595101 SLC16A3O15427 465 aaKnown RBP16.47■□□□□ 0.23
USE1-206ENST00000595101 CLSTN1O94985 981 aa16.47■□□□□ 0.23
USE1-206ENST00000595101 ATICP31939 592 aa16.47■□□□□ 0.23
USE1-206ENST00000595101 PIK3CAP42336 1068 aa16.47■□□□□ 0.23
USE1-206ENST00000595101 POTEHQ6S545 545 aa16.47■□□□□ 0.23
USE1-206ENST00000595101 CCDC149Q6ZUS6 474 aa16.47■□□□□ 0.23
USE1-206ENST00000595101 FILIP1Q7Z7B0 1213 aa16.47■□□□□ 0.23
USE1-206ENST00000595101 TMEM86AQ8N2M4 240 aa16.47■□□□□ 0.23
USE1-206ENST00000595101 SYAP1Q96A49 352 aaPredicted RBP16.47■□□□□ 0.23
USE1-206ENST00000595101 NECTIN4Q96NY8 510 aa16.47■□□□□ 0.23
USE1-206ENST00000595101 RHOBTB2Q9BYZ6 727 aa16.47■□□□□ 0.23
USE1-206ENST00000595101 DPEP3Q9H4B8 488 aa16.47■□□□□ 0.23
USE1-206ENST00000595101 DOCK6Q96HP0 2047 aa16.47■□□□□ 0.23
USE1-206ENST00000595101 STAU1O95793 577 aaKnown RBP16.46■□□□□ 0.23
USE1-206ENST00000595101 HNRNPA1P09651 372 aaKnown RBP eCLIP16.46■□□□□ 0.23
USE1-206ENST00000595101 HOXA9P31269 272 aa16.46■□□□□ 0.23
USE1-206ENST00000595101 PPP1R2P41236 205 aa16.46■□□□□ 0.23
USE1-206ENST00000595101 TNNC1P63316 161 aa16.46■□□□□ 0.23
USE1-206ENST00000595101 ELMSAN1Q6PJG2 1045 aa16.46■□□□□ 0.23
USE1-206ENST00000595101 DPH6Q7L8W6 267 aa16.46■□□□□ 0.23
USE1-206ENST00000595101 STKLD1Q8NE28 680 aa16.46■□□□□ 0.23
USE1-206ENST00000595101 SLC35C1Q96A29 364 aa16.46■□□□□ 0.23
USE1-206ENST00000595101 ACBD6Q9BR61 282 aa16.46■□□□□ 0.23
USE1-206ENST00000595101 OXCT2Q9BYC2 517 aaPredicted RBP16.46■□□□□ 0.23
USE1-206ENST00000595101 DNAJC25Q9H1X3 360 aa16.46■□□□□ 0.23
USE1-206ENST00000595101 VRTNQ9H8Y1 702 aa16.46■□□□□ 0.23
USE1-206ENST00000595101 TMEM8AQ9HCN3 771 aa16.46■□□□□ 0.23
USE1-206ENST00000595101 CRTAC1Q9NQ79 661 aa16.46■□□□□ 0.23
USE1-206ENST00000595101 ABI2Q9NYB9 513 aaPredicted RBP16.46■□□□□ 0.23
USE1-206ENST00000595101 ARMCX3Q9UH62 379 aaPredicted RBP16.46■□□□□ 0.23
USE1-206ENST00000595101 YIPF1Q9Y548 306 aa16.46■□□□□ 0.23
USE1-206ENST00000595101 C2orf16Q68DN1 1984 aa16.46■□□□□ 0.23
USE1-206ENST00000595101 CLUHO75153 1309 aa16.46■□□□□ 0.23
USE1-206ENST00000595101 MTCL1Q9Y4B5 1905 aaKnown RBP16.46■□□□□ 0.23
USE1-206ENST00000595101 BICDL2A1A5D9 508 aa16.46■□□□□ 0.22
USE1-206ENST00000595101 ASS1P00966 412 aaKnown RBP16.46■□□□□ 0.22
USE1-206ENST00000595101 LRG1P02750 347 aa16.46■□□□□ 0.22
USE1-206ENST00000595101 WARSP23381 471 aaKnown RBP16.46■□□□□ 0.22
USE1-206ENST00000595101 LHX1P48742 406 aa16.46■□□□□ 0.22
USE1-206ENST00000595101 GPR15P49685 360 aa16.46■□□□□ 0.22
USE1-206ENST00000595101 SLC5A9Q2M3M2 681 aa16.46■□□□□ 0.22
USE1-206ENST00000595101 SGSM1Q2NKQ1 1148 aa16.46■□□□□ 0.22
USE1-206ENST00000595101 INTS6LQ5JSJ4 861 aaKnown RBP16.46■□□□□ 0.22
USE1-206ENST00000595101 KRT39Q6A163 491 aa16.46■□□□□ 0.22
USE1-206ENST00000595101 HS6ST3Q8IZP7 471 aa16.46■□□□□ 0.22
USE1-206ENST00000595101 OR6B3Q8NGW1 331 aa16.46■□□□□ 0.22
USE1-206ENST00000595101 ITFG1Q8TB96 612 aa16.46■□□□□ 0.22
USE1-206ENST00000595101 GPR152Q8TDT2 470 aa16.46■□□□□ 0.22
USE1-206ENST00000595101 CEP63Q96MT8 703 aa16.46■□□□□ 0.22
USE1-206ENST00000595101 MYADMQ96S97 322 aa16.46■□□□□ 0.22
USE1-206ENST00000595101 RWDD2AQ9UIY3 292 aa16.46■□□□□ 0.22
USE1-206ENST00000595101 TNFRSF10AO00220 468 aa16.45■□□□□ 0.22
USE1-206ENST00000595101 TACC1O75410 805 aa16.45■□□□□ 0.22
USE1-206ENST00000595101 GNL1P36915 607 aaPredicted RBP16.45■□□□□ 0.22
USE1-206ENST00000595101 CCR2P41597 374 aa16.45■□□□□ 0.22
USE1-206ENST00000595101 ASPAP45381 313 aa16.45■□□□□ 0.22
USE1-206ENST00000595101 MXI1P50539 228 aa16.45■□□□□ 0.22
USE1-206ENST00000595101 NLRP12P59046 1061 aa16.45■□□□□ 0.22
USE1-206ENST00000595101 ORC1Q13415 861 aa16.45■□□□□ 0.22
USE1-206ENST00000595101 CCDC40Q4G0X9 1142 aa16.45■□□□□ 0.22
USE1-206ENST00000595101 ZNF667Q5HYK9 610 aa16.45■□□□□ 0.22
USE1-206ENST00000595101 SDHAF4Q5VUM1 108 aa16.45■□□□□ 0.22
USE1-206ENST00000595101 MLKLQ8NB16 471 aa16.45■□□□□ 0.22
USE1-206ENST00000595101 TCEAL4Q96EI5 215 aa16.45■□□□□ 0.22
USE1-206ENST00000595101 SEPT5Q99719 369 aaPredicted RBP16.45■□□□□ 0.22
USE1-206ENST00000595101 CORO1BQ9BR76 489 aa16.45■□□□□ 0.22
USE1-206ENST00000595101 TMEM63CQ9P1W3 806 aa16.45■□□□□ 0.22
USE1-206ENST00000595101 HMGXB4Q9UGU5 601 aa16.45■□□□□ 0.22
USE1-206ENST00000595101 XYLBO75191 536 aa16.44■□□□□ 0.22
USE1-206ENST00000595101 RHOP08100 348 aa16.44■□□□□ 0.22
USE1-206ENST00000595101 ATF6P18850 670 aa16.44■□□□□ 0.22
USE1-206ENST00000595101 CYP2F1P24903 491 aa16.44■□□□□ 0.22
USE1-206ENST00000595101 MYL7Q01449 175 aa16.44■□□□□ 0.22
USE1-206ENST00000595101 TSPY1Q01534 308 aa16.44■□□□□ 0.22
USE1-206ENST00000595101 ENPEPQ07075 957 aa16.44■□□□□ 0.22
USE1-206ENST00000595101 MGAT5BQ3V5L5 792 aa16.44■□□□□ 0.22
USE1-206ENST00000595101 RBM43Q6ZSC3 357 aaKnown RBP16.44■□□□□ 0.22
USE1-206ENST00000595101 GET4Q7L5D6 327 aaPredicted RBP16.44■□□□□ 0.22
USE1-206ENST00000595101 IRF2BP1Q8IU81 584 aa16.44■□□□□ 0.22
USE1-206ENST00000595101 RNF135Q8IUD6 432 aa16.44■□□□□ 0.22
USE1-206ENST00000595101 SYT15Q9BQS2 421 aa16.44■□□□□ 0.22
USE1-206ENST00000595101 LIMD1Q9UGP4 676 aa16.44■□□□□ 0.22
USE1-206ENST00000595101 ASGR2P07307 311 aa16.43■□□□□ 0.22
USE1-206ENST00000595101 GTF2H1P32780 548 aa16.43■□□□□ 0.22
USE1-206ENST00000595101 NOP14P78316 857 aaKnown RBP16.43■□□□□ 0.22
USE1-206ENST00000595101 FAM171BQ6P995 826 aa16.43■□□□□ 0.22
USE1-206ENST00000595101 FOXR2Q6PJQ5 311 aa16.43■□□□□ 0.22
USE1-206ENST00000595101 CYP26C1Q6V0L0 522 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms