RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 LMBRD2Q68DH5 695 aaPredicted RBP19.04■□□□□ 0.64
SHKBP1-204ENST00000594862 ASTLQ6HA08 431 aaPredicted RBP19.04■□□□□ 0.64
SHKBP1-204ENST00000594862 PARM1Q6UWI2 310 aa19.04■□□□□ 0.64
SHKBP1-204ENST00000594862 E2F7Q96AV8 911 aa19.04■□□□□ 0.64
SHKBP1-204ENST00000594862 ELSPBP1Q96BH3 223 aa19.04■□□□□ 0.64
SHKBP1-204ENST00000594862 DOCK6Q96HP0 2047 aa19.04■□□□□ 0.64
SHKBP1-204ENST00000594862 TMEM209Q96SK2 561 aa19.04■□□□□ 0.64
SHKBP1-204ENST00000594862 SEPT5Q99719 369 aaPredicted RBP19.04■□□□□ 0.64
SHKBP1-204ENST00000594862 IRF2BPLQ9H1B7 796 aa19.04■□□□□ 0.64
SHKBP1-204ENST00000594862 KCTD10Q9H3F6 313 aa19.04■□□□□ 0.64
SHKBP1-204ENST00000594862 ZMYM5Q9UJ78 669 aa19.04■□□□□ 0.64
SHKBP1-204ENST00000594862 CIZ1Q9ULV3 898 aaPredicted RBP19.04■□□□□ 0.64
SHKBP1-204ENST00000594862 TRAF3IP3Q9Y228 551 aa19.04■□□□□ 0.64
SHKBP1-204ENST00000594862 FRMD4BQ9Y2L6 1034 aa19.04■□□□□ 0.64
SHKBP1-204ENST00000594862 MAPK13O15264 365 aa19.03■□□□□ 0.64
SHKBP1-204ENST00000594862 NARSO43776 548 aaKnown RBP19.03■□□□□ 0.64
SHKBP1-204ENST00000594862 STAU1O95793 577 aaKnown RBP19.03■□□□□ 0.64
SHKBP1-204ENST00000594862 NR3C1P04150 777 aa19.03■□□□□ 0.64
SHKBP1-204ENST00000594862 CFHP08603 1231 aa19.03■□□□□ 0.64
SHKBP1-204ENST00000594862 RPL13P26373 211 aaKnown RBP19.03■□□□□ 0.64
SHKBP1-204ENST00000594862 AVPR2P30518 371 aa19.03■□□□□ 0.64
SHKBP1-204ENST00000594862 ATICP31939 592 aa19.03■□□□□ 0.64
SHKBP1-204ENST00000594862 TRPC3Q13507 836 aa19.03■□□□□ 0.64
SHKBP1-204ENST00000594862 MAPRE1Q15691 268 aaKnown RBP19.03■□□□□ 0.64
SHKBP1-204ENST00000594862 TAF12Q16514 161 aa19.03■□□□□ 0.64
SHKBP1-204ENST00000594862 NFIL3Q16649 462 aa19.03■□□□□ 0.64
SHKBP1-204ENST00000594862 SIX5Q8N196 739 aa19.03■□□□□ 0.64
SHKBP1-204ENST00000594862 GUF1Q8N442 669 aaKnown RBP19.03■□□□□ 0.64
SHKBP1-204ENST00000594862 FAM200AQ8TCP9 573 aa19.03■□□□□ 0.64
SHKBP1-204ENST00000594862 SYAP1Q96A49 352 aaPredicted RBP19.03■□□□□ 0.64
SHKBP1-204ENST00000594862 MCRS1Q96EZ8 462 aa19.03■□□□□ 0.64
SHKBP1-204ENST00000594862 SHDQ96IW2 340 aa19.03■□□□□ 0.64
SHKBP1-204ENST00000594862 GCNAQ96QF7 691 aa19.03■□□□□ 0.64
SHKBP1-204ENST00000594862 CRISPLD1Q9H336 500 aa19.03■□□□□ 0.64
SHKBP1-204ENST00000594862 DMAC2Q9NW81 257 aa19.03■□□□□ 0.64
SHKBP1-204ENST00000594862 ABI2Q9NYB9 513 aaPredicted RBP19.03■□□□□ 0.64
SHKBP1-204ENST00000594862 SLC27A5Q9Y2P5 690 aa19.03■□□□□ 0.64
SHKBP1-204ENST00000594862 GABRDO14764 452 aa19.02■□□□□ 0.64
SHKBP1-204ENST00000594862 PHACTR2O75167 634 aa19.02■□□□□ 0.64
SHKBP1-204ENST00000594862 PRR29P0C7W0 189 aa19.02■□□□□ 0.64
SHKBP1-204ENST00000594862 HAPLN1P10915 354 aaPredicted RBP19.02■□□□□ 0.64
SHKBP1-204ENST00000594862 PTPN5P54829 565 aa19.02■□□□□ 0.64
SHKBP1-204ENST00000594862 RPL10AP62906 217 aaKnown RBP19.02■□□□□ 0.64
SHKBP1-204ENST00000594862 TNNC1P63316 161 aa19.02■□□□□ 0.64
SHKBP1-204ENST00000594862 CLDN10P78369 228 aa19.02■□□□□ 0.64
SHKBP1-204ENST00000594862 FAM160A1Q05DH4 1040 aa19.02■□□□□ 0.64
SHKBP1-204ENST00000594862 ARHGAP15Q53QZ3 475 aa19.02■□□□□ 0.64
SHKBP1-204ENST00000594862 LIMS2Q7Z4I7 341 aa19.02■□□□□ 0.64
SHKBP1-204ENST00000594862 FMR1NBQ8N0W7 255 aaPredicted RBP19.02■□□□□ 0.64
SHKBP1-204ENST00000594862 SMARCD2Q92925 531 aa19.02■□□□□ 0.64
SHKBP1-204ENST00000594862 FUBP3Q96I24 572 aaKnown RBP eCLIP19.02■□□□□ 0.64
SHKBP1-204ENST00000594862 TIGD1Q96MW7 591 aa19.02■□□□□ 0.64
SHKBP1-204ENST00000594862 DNAJC25Q9H1X3 360 aa19.02■□□□□ 0.64
SHKBP1-204ENST00000594862 ZFP14Q9HCL3 533 aa19.02■□□□□ 0.64
SHKBP1-204ENST00000594862 ARHGEF3Q9NR81 526 aa19.02■□□□□ 0.64
SHKBP1-204ENST00000594862 SMC2O95347 1197 aa19.01■□□□□ 0.63
SHKBP1-204ENST00000594862 PDGFBP01127 241 aaPredicted RBP19.01■□□□□ 0.63
SHKBP1-204ENST00000594862 WARSP23381 471 aaKnown RBP19.01■□□□□ 0.63
SHKBP1-204ENST00000594862 CDC25CP30307 473 aa19.01■□□□□ 0.63
SHKBP1-204ENST00000594862 ENPEPQ07075 957 aa19.01■□□□□ 0.63
SHKBP1-204ENST00000594862 SOWAHAQ2M3V2 549 aa19.01■□□□□ 0.63
SHKBP1-204ENST00000594862 CFAP221Q4G0U5 840 aa19.01■□□□□ 0.63
SHKBP1-204ENST00000594862 C4orf50Q6ZRC1 276 aa19.01■□□□□ 0.63
SHKBP1-204ENST00000594862 DNAJB7Q7Z6W7 309 aaPredicted RBP19.01■□□□□ 0.63
SHKBP1-204ENST00000594862 TMC8Q8IU68 726 aa19.01■□□□□ 0.63
SHKBP1-204ENST00000594862 HS6ST3Q8IZP7 471 aa19.01■□□□□ 0.63
SHKBP1-204ENST00000594862 TMC2Q8TDI7 906 aa19.01■□□□□ 0.63
SHKBP1-204ENST00000594862 GPR152Q8TDT2 470 aa19.01■□□□□ 0.63
SHKBP1-204ENST00000594862 PARD3BQ8TEW8 1205 aa19.01■□□□□ 0.63
SHKBP1-204ENST00000594862 DEPDC1BQ8WUY9 529 aa19.01■□□□□ 0.63
SHKBP1-204ENST00000594862 TCEAL4Q96EI5 215 aa19.01■□□□□ 0.63
SHKBP1-204ENST00000594862 ASB16Q96NS5 453 aa19.01■□□□□ 0.63
SHKBP1-204ENST00000594862 MMS19Q96T76 1030 aa19.01■□□□□ 0.63
SHKBP1-204ENST00000594862 KXD1Q9BQD3 176 aa19.01■□□□□ 0.63
SHKBP1-204ENST00000594862 SLITRK6Q9H5Y7 841 aa19.01■□□□□ 0.63
SHKBP1-204ENST00000594862 TRPV4Q9HBA0 871 aa19.01■□□□□ 0.63
SHKBP1-204ENST00000594862 CDH9Q9ULB4 789 aa19.01■□□□□ 0.63
SHKBP1-204ENST00000594862 TACC1O75410 805 aa19■□□□□ 0.63
SHKBP1-204ENST00000594862 ATF6P18850 670 aa19■□□□□ 0.63
SHKBP1-204ENST00000594862 AOC1P19801 751 aa19■□□□□ 0.63
SHKBP1-204ENST00000594862 CCR2P41597 374 aa19■□□□□ 0.63
SHKBP1-204ENST00000594862 VCPP55072 806 aaKnown RBP19■□□□□ 0.63
SHKBP1-204ENST00000594862 PRKCQQ04759 706 aa19■□□□□ 0.63
SHKBP1-204ENST00000594862 BIRC3Q13489 604 aa19■□□□□ 0.63
SHKBP1-204ENST00000594862 PHLDB3Q6NSJ2 640 aa19■□□□□ 0.63
SHKBP1-204ENST00000594862 LRRTM3Q86VH5 581 aa19■□□□□ 0.63
SHKBP1-204ENST00000594862 SPATA2LQ8IUW3 424 aaPredicted RBP19■□□□□ 0.63
SHKBP1-204ENST00000594862 TTC9BQ8N6N2 239 aa19■□□□□ 0.63
SHKBP1-204ENST00000594862 FLCNQ8NFG4 579 aa19■□□□□ 0.63
SHKBP1-204ENST00000594862 SHKBP1Q8TBC3 707 aa19■□□□□ 0.63
SHKBP1-204ENST00000594862 DNASE1L2Q92874 299 aa19■□□□□ 0.63
SHKBP1-204ENST00000594862 FAM84AQ96KN4 292 aa19■□□□□ 0.63
SHKBP1-204ENST00000594862 CEP295NLQ96MC4 621 aa19■□□□□ 0.63
SHKBP1-204ENST00000594862 GSDMAQ96QA5 445 aa19■□□□□ 0.63
SHKBP1-204ENST00000594862 LRRC3Q9BY71 257 aa19■□□□□ 0.63
SHKBP1-204ENST00000594862 VRTNQ9H8Y1 702 aa19■□□□□ 0.63
SHKBP1-204ENST00000594862 A0A1W2PRU2 124 aa18.99■□□□□ 0.63
SHKBP1-204ENST00000594862 IKBKBO14920 756 aa18.99■□□□□ 0.63
SHKBP1-204ENST00000594862 NR2F2P24468 414 aa18.99■□□□□ 0.63
SHKBP1-204ENST00000594862 SNW1Q13573 536 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms