RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 LHX5Q9H2C1 402 aa22.1■■□□□ 1.13
PNKP-203ENST00000593946 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.1■■□□□ 1.133e-6■■■■□ 21.1
PNKP-203ENST00000593946 GRID2IPA4D2P6 1211 aa22.09■■□□□ 1.13
PNKP-203ENST00000593946 O00370 1275 aa22.09■■□□□ 1.13
PNKP-203ENST00000593946 CYP1A2P05177 515 aa22.09■■□□□ 1.13
PNKP-203ENST00000593946 NOP2P46087 812 aaKnown RBP22.09■■□□□ 1.13
PNKP-203ENST00000593946 HADHBP55084 474 aaKnown RBP22.09■■□□□ 1.13
PNKP-203ENST00000593946 CNGA2Q16280 664 aa22.09■■□□□ 1.13
PNKP-203ENST00000593946 TMEM35BQ8NCS4 154 aa22.09■■□□□ 1.13
PNKP-203ENST00000593946 TPCN2Q8NHX9 752 aa22.09■■□□□ 1.13
PNKP-203ENST00000593946 ZNF653Q96CK0 615 aa22.09■■□□□ 1.13
PNKP-203ENST00000593946 TRIM11Q96F44 468 aa22.09■■□□□ 1.13
PNKP-203ENST00000593946 VCPIP1Q96JH7 1222 aa22.09■■□□□ 1.13
PNKP-203ENST00000593946 OSGEPQ9NPF4 335 aa22.09■■□□□ 1.13
PNKP-203ENST00000593946 TBC1D13Q9NVG8 400 aa22.09■■□□□ 1.13
PNKP-203ENST00000593946 KIAA0355O15063 1070 aa22.09■■□□□ 1.13
PNKP-203ENST00000593946 B4GALT3O60512 393 aa22.09■■□□□ 1.13
PNKP-203ENST00000593946 PALMO75781 387 aa22.09■■□□□ 1.13
PNKP-203ENST00000593946 MYBL1P10243 752 aa22.09■■□□□ 1.13
PNKP-203ENST00000593946 PAX3P23760 479 aa22.09■■□□□ 1.13
PNKP-203ENST00000593946 GNL1P36915 607 aaPredicted RBP22.09■■□□□ 1.13
PNKP-203ENST00000593946 CNKSR3Q6P9H4 555 aa22.09■■□□□ 1.13
PNKP-203ENST00000593946 CD300LGQ6UXG3 332 aa22.09■■□□□ 1.13
PNKP-203ENST00000593946 UBE2Q1Q7Z7E8 422 aa22.09■■□□□ 1.13
PNKP-203ENST00000593946 ACOT1Q86TX2 421 aa22.09■■□□□ 1.13
PNKP-203ENST00000593946 WDTC1Q8N5D0 677 aa22.09■■□□□ 1.13
PNKP-203ENST00000593946 C1orf131Q8NDD1 294 aaKnown RBP22.09■■□□□ 1.13
PNKP-203ENST00000593946 SNX25Q9H3E2 840 aa22.09■■□□□ 1.13
PNKP-203ENST00000593946 STXBP5LQ9Y2K9 1186 aa22.09■■□□□ 1.13
PNKP-203ENST00000593946 JRKLQ9Y4A0 524 aa22.09■■□□□ 1.13
PNKP-203ENST00000593946 CEP83Q9Y592 693 aa22.09■■□□□ 1.13
PNKP-203ENST00000593946 TRIM43BA6NCK2 446 aa22.08■■□□□ 1.12
PNKP-203ENST00000593946 A8MXQ7 604 aa22.08■■□□□ 1.12
PNKP-203ENST00000593946 GABRDO14764 452 aa22.08■■□□□ 1.12
PNKP-203ENST00000593946 ATMINO43313 823 aaPredicted RBP22.08■■□□□ 1.12
PNKP-203ENST00000593946 B3GAT3O94766 335 aa22.08■■□□□ 1.12
PNKP-203ENST00000593946 DDHD2O94830 711 aa22.08■■□□□ 1.12
PNKP-203ENST00000593946 TIMP1P01033 207 aa22.08■■□□□ 1.12
PNKP-203ENST00000593946 C1QBPQ07021 282 aaKnown RBP22.08■■□□□ 1.12
PNKP-203ENST00000593946 PTP4A2Q12974 167 aa22.08■■□□□ 1.12
PNKP-203ENST00000593946 STILQ15468 1287 aa22.08■■□□□ 1.12
PNKP-203ENST00000593946 WSCD1Q658N2 575 aa22.08■■□□□ 1.12
PNKP-203ENST00000593946 DENND1BQ6P3S1 775 aa22.08■■□□□ 1.12
PNKP-203ENST00000593946 OSTM1Q86WC4 334 aa22.08■■□□□ 1.12
PNKP-203ENST00000593946 ZNF280BQ86YH2 543 aa22.08■■□□□ 1.12
PNKP-203ENST00000593946 CRYBG2Q8N1P7 616 aa22.08■■□□□ 1.12
PNKP-203ENST00000593946 C12orf29Q8N999 325 aa22.08■■□□□ 1.12
PNKP-203ENST00000593946 LRRC57Q8N9N7 239 aa22.08■■□□□ 1.12
PNKP-203ENST00000593946 TRIM43Q96BQ3 446 aaPredicted RBP22.08■■□□□ 1.12
PNKP-203ENST00000593946 LRFN2Q9ULH4 789 aa22.08■■□□□ 1.12
PNKP-203ENST00000593946 COG5Q9UP83 839 aa22.08■■□□□ 1.12
PNKP-203ENST00000593946 HCRTO43612 131 aa22.07■■□□□ 1.12
PNKP-203ENST00000593946 MTA2O94776 668 aa22.07■■□□□ 1.12
PNKP-203ENST00000593946 MICAL2O94851 1124 aa22.07■■□□□ 1.12
PNKP-203ENST00000593946 MMP8P22894 467 aa22.07■■□□□ 1.12
PNKP-203ENST00000593946 LMO2P25791 158 aa22.07■■□□□ 1.12
PNKP-203ENST00000593946 ITGB8P26012 769 aa22.07■■□□□ 1.12
PNKP-203ENST00000593946 TIGD5Q53EQ6 642 aa22.07■■□□□ 1.12
PNKP-203ENST00000593946 DCLRE1AQ6PJP8 1040 aa22.07■■□□□ 1.12
PNKP-203ENST00000593946 LCLAT1Q6UWP7 414 aa22.07■■□□□ 1.12
PNKP-203ENST00000593946 COLGALT2Q8IYK4 626 aa22.07■■□□□ 1.12
PNKP-203ENST00000593946 TMEM86AQ8N2M4 240 aa22.07■■□□□ 1.12
PNKP-203ENST00000593946 CALR3Q96L12 384 aaKnown RBP22.07■■□□□ 1.12
PNKP-203ENST00000593946 CASD1Q96PB1 797 aa22.07■■□□□ 1.12
PNKP-203ENST00000593946 DPEP3Q9H4B8 488 aa22.07■■□□□ 1.12
PNKP-203ENST00000593946 L2HGDHQ9H9P8 463 aa22.07■■□□□ 1.12
PNKP-203ENST00000593946 AVENQ9NQS1 362 aaPredicted RBP22.07■■□□□ 1.12
PNKP-203ENST00000593946 ENC1O14682 589 aa22.06■■□□□ 1.12
PNKP-203ENST00000593946 HOXA2O43364 376 aa22.06■■□□□ 1.12
PNKP-203ENST00000593946 URI1O94763 535 aaPredicted RBP22.06■■□□□ 1.12
PNKP-203ENST00000593946 ATP1A1P05023 1023 aaKnown RBP22.06■■□□□ 1.12
PNKP-203ENST00000593946 DSTYKQ6XUX3 929 aa22.06■■□□□ 1.12
PNKP-203ENST00000593946 NPAS4Q8IUM7 802 aa22.06■■□□□ 1.12
PNKP-203ENST00000593946 ABI1Q8IZP0 508 aa22.06■■□□□ 1.12
PNKP-203ENST00000593946 C11orf70Q9BRQ4 267 aa22.06■■□□□ 1.12
PNKP-203ENST00000593946 RNF216Q9NWF9 866 aaPredicted RBP22.06■■□□□ 1.12
PNKP-203ENST00000593946 ADAM22Q9P0K1 906 aa22.06■■□□□ 1.12
PNKP-203ENST00000593946 CTTNBP2NLQ9P2B4 639 aa22.06■■□□□ 1.12
PNKP-203ENST00000593946 UVRAGQ9P2Y5 699 aa22.06■■□□□ 1.12
PNKP-203ENST00000593946 CNOT8Q9UFF9 292 aaKnown RBP22.06■■□□□ 1.12
PNKP-203ENST00000593946 PDGFRBP09619 1106 aa22.06■■□□□ 1.12
PNKP-203ENST00000593946 AMPD2Q01433 879 aa22.06■■□□□ 1.12
PNKP-203ENST00000593946 RNASELQ05823 741 aaKnown RBP22.06■■□□□ 1.12
PNKP-203ENST00000593946 IKBKEQ14164 716 aa22.06■■□□□ 1.12
PNKP-203ENST00000593946 PPP1R26Q5T8A7 1209 aaPredicted RBP22.06■■□□□ 1.12
PNKP-203ENST00000593946 PAPD7Q5XG87 772 aaKnown RBP22.06■■□□□ 1.12
PNKP-203ENST00000593946 MMS22LQ6ZRQ5 1243 aa22.06■■□□□ 1.12
PNKP-203ENST00000593946 SLFN11Q7Z7L1 901 aa22.06■■□□□ 1.12
PNKP-203ENST00000593946 RSPH1Q8WYR4 309 aa22.06■■□□□ 1.12
PNKP-203ENST00000593946 DNAI2Q9GZS0 605 aa22.06■■□□□ 1.12
PNKP-203ENST00000593946 PRDM5Q9NQX1 630 aaPredicted RBP22.06■■□□□ 1.12
PNKP-203ENST00000593946 TSPAN16Q9UKR8 245 aa22.06■■□□□ 1.12
PNKP-203ENST00000593946 TMEM189-UBE2V1I3L0A0 370 aa22.05■■□□□ 1.12
PNKP-203ENST00000593946 M0QYV0 167 aa22.05■■□□□ 1.12
PNKP-203ENST00000593946 M0QZQ0 153 aa22.05■■□□□ 1.12
PNKP-203ENST00000593946 KIF4AO95239 1232 aa22.05■■□□□ 1.12
PNKP-203ENST00000593946 RRM1P23921 792 aa22.05■■□□□ 1.12
PNKP-203ENST00000593946 PAN2Q504Q3 1202 aaKnown RBP22.05■■□□□ 1.12
PNKP-203ENST00000593946 ARHGAP17Q68EM7 881 aa22.05■■□□□ 1.12
PNKP-203ENST00000593946 SPATA18Q8TC71 538 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms