RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 CDC25CP30307 473 aa22.07■■□□□ 1.12
TRIM47-207ENST00000593089 POLR2BP30876 1174 aaKnown RBP22.07■■□□□ 1.12
TRIM47-207ENST00000593089 CCR3P51677 355 aa22.07■■□□□ 1.12
TRIM47-207ENST00000593089 MLLT6P55198 1093 aaPredicted RBP22.07■■□□□ 1.12
TRIM47-207ENST00000593089 PPP2R5DQ14738 602 aa22.07■■□□□ 1.12
TRIM47-207ENST00000593089 ARHGAP29Q52LW3 1261 aa22.07■■□□□ 1.12
TRIM47-207ENST00000593089 CCDC73Q6ZRK6 1079 aa22.07■■□□□ 1.12
TRIM47-207ENST00000593089 DCP1BQ8IZD4 617 aaKnown RBP22.07■■□□□ 1.12
TRIM47-207ENST00000593089 SYCP3Q8IZU3 236 aa22.07■■□□□ 1.12
TRIM47-207ENST00000593089 NOC3LQ8WTT2 800 aaKnown RBP22.07■■□□□ 1.12
TRIM47-207ENST00000593089 MSANTD3Q96H12 275 aa22.07■■□□□ 1.12
TRIM47-207ENST00000593089 USP28Q96RU2 1077 aa22.07■■□□□ 1.12
TRIM47-207ENST00000593089 FAM126AQ9BYI3 521 aaPredicted RBP22.07■■□□□ 1.12
TRIM47-207ENST00000593089 TASP1Q9H6P5 420 aa22.07■■□□□ 1.12
TRIM47-207ENST00000593089 C8orf33Q9H7E9 229 aaPredicted RBP22.07■■□□□ 1.12
TRIM47-207ENST00000593089 IL21Q9HBE4 155 aa22.07■■□□□ 1.12
TRIM47-207ENST00000593089 FOXD4L1Q9NU39 408 aa22.07■■□□□ 1.12
TRIM47-207ENST00000593089 GTSE1Q9NYZ3 720 aa22.07■■□□□ 1.12
TRIM47-207ENST00000593089 PCDHB13Q9Y5F0 798 aa22.07■■□□□ 1.12
TRIM47-207ENST00000593089 KIF26AQ9ULI4 1882 aaPredicted RBP22.07■■□□□ 1.12
TRIM47-207ENST00000593089 WDR87Q6ZQQ6 2873 aa22.06■■□□□ 1.12
TRIM47-207ENST00000593089 A0A087X0B3 334 aa22.06■■□□□ 1.12
TRIM47-207ENST00000593089 GOLGA8IPA6NC78 632 aa22.06■■□□□ 1.12
TRIM47-207ENST00000593089 GOLGA8JA6NMD2 632 aa22.06■■□□□ 1.12
TRIM47-207ENST00000593089 ITGB3P05106 788 aa22.06■■□□□ 1.12
TRIM47-207ENST00000593089 TDGF1P13385 188 aa22.06■■□□□ 1.12
TRIM47-207ENST00000593089 PNPLA4P41247 253 aa22.06■■□□□ 1.12
TRIM47-207ENST00000593089 SMARCB1Q12824 385 aa22.06■■□□□ 1.12
TRIM47-207ENST00000593089 MAMSTRQ6ZN01 415 aa22.06■■□□□ 1.12
TRIM47-207ENST00000593089 BRSK2Q8IWQ3 736 aa22.06■■□□□ 1.12
TRIM47-207ENST00000593089 BPIFB1Q8TDL5 484 aa22.06■■□□□ 1.12
TRIM47-207ENST00000593089 FAM84AQ96KN4 292 aa22.06■■□□□ 1.12
TRIM47-207ENST00000593089 FGFBP2Q9BYJ0 223 aa22.06■■□□□ 1.12
TRIM47-207ENST00000593089 SMG9Q9H0W8 520 aaKnown RBP22.06■■□□□ 1.12
TRIM47-207ENST00000593089 OLFML3Q9NRN5 406 aa22.06■■□□□ 1.12
TRIM47-207ENST00000593089 RBM12Q9NTZ6 932 aaKnown RBP22.06■■□□□ 1.12
TRIM47-207ENST00000593089 PANK4Q9NVE7 773 aa22.06■■□□□ 1.12
TRIM47-207ENST00000593089 OBP2AQ9NY56 170 aa22.06■■□□□ 1.12
TRIM47-207ENST00000593089 RBAKQ9NYW8 714 aaPredicted RBP22.06■■□□□ 1.12
TRIM47-207ENST00000593089 AGAP1Q9UPQ3 857 aa22.06■■□□□ 1.12
TRIM47-207ENST00000593089 PCDHB5Q9Y5E4 795 aa22.06■■□□□ 1.12
TRIM47-207ENST00000593089 SPECC1L-ADORA2AF8WAN1 911 aa22.05■■□□□ 1.12
TRIM47-207ENST00000593089 LDHAP00338 332 aaKnown RBP22.05■■□□□ 1.12
TRIM47-207ENST00000593089 NRLP54845 237 aa22.05■■□□□ 1.12
TRIM47-207ENST00000593089 TSPY1Q01534 308 aa22.05■■□□□ 1.12
TRIM47-207ENST00000593089 SATB1Q01826 763 aa22.05■■□□□ 1.12
TRIM47-207ENST00000593089 LRRC32Q14392 662 aa22.05■■□□□ 1.12
TRIM47-207ENST00000593089 GAS6Q14393 721 aa22.05■■□□□ 1.12
TRIM47-207ENST00000593089 SLC39A14Q15043 492 aa22.05■■□□□ 1.12
TRIM47-207ENST00000593089 C1orf228Q6PIY5 440 aa22.05■■□□□ 1.12
TRIM47-207ENST00000593089 TXNDC11Q6PKC3 985 aa22.05■■□□□ 1.12
TRIM47-207ENST00000593089 SECISBP2LQ93073 1101 aaKnown RBP22.05■■□□□ 1.12
TRIM47-207ENST00000593089 SLC46A2Q9BY10 475 aa22.05■■□□□ 1.12
TRIM47-207ENST00000593089 PCIF1Q9H4Z3 704 aa22.05■■□□□ 1.12
TRIM47-207ENST00000593089 TMLHEQ9NVH6 421 aa22.05■■□□□ 1.12
TRIM47-207ENST00000593089 MTMR6Q9Y217 621 aa22.05■■□□□ 1.12
TRIM47-207ENST00000593089 GPR179Q6PRD1 2367 aa22.05■■□□□ 1.12
TRIM47-207ENST00000593089 MYBPHLA2RUH7 354 aa22.04■■□□□ 1.12
TRIM47-207ENST00000593089 GARTP22102 1010 aa22.04■■□□□ 1.12
TRIM47-207ENST00000593089 CTHP32929 405 aa22.04■■□□□ 1.12
TRIM47-207ENST00000593089 CXCL12P48061 93 aa22.04■■□□□ 1.12
TRIM47-207ENST00000593089 GPR15P49685 360 aa22.04■■□□□ 1.12
TRIM47-207ENST00000593089 BFSP1Q12934 665 aa22.04■■□□□ 1.12
TRIM47-207ENST00000593089 SCARA3Q6AZY7 606 aa22.04■■□□□ 1.12
TRIM47-207ENST00000593089 DGLUCYQ7Z3D6 616 aa22.04■■□□□ 1.12
TRIM47-207ENST00000593089 RALGPS2Q86X27 583 aaPredicted RBP22.04■■□□□ 1.12
TRIM47-207ENST00000593089 PDCL2Q8N4E4 241 aa22.04■■□□□ 1.12
TRIM47-207ENST00000593089 PDILTQ8N807 584 aa22.04■■□□□ 1.12
TRIM47-207ENST00000593089 C1orf127Q8N9H9 656 aa22.04■■□□□ 1.12
TRIM47-207ENST00000593089 STKLD1Q8NE28 680 aa22.04■■□□□ 1.12
TRIM47-207ENST00000593089 CACTINQ8WUQ7 758 aaKnown RBP22.04■■□□□ 1.12
TRIM47-207ENST00000593089 CBWD1Q9BRT8 395 aa22.04■■□□□ 1.12
TRIM47-207ENST00000593089 PI4K2AQ9BTU6 479 aa22.04■■□□□ 1.12
TRIM47-207ENST00000593089 L1RE1Q9UN81 338 aa22.04■■□□□ 1.12
TRIM47-207ENST00000593089 DENND4CQ5VZ89 1909 aa22.04■■□□□ 1.12
TRIM47-207ENST00000593089 DMXL1Q9Y485 3027 aa22.03■■□□□ 1.12
TRIM47-207ENST00000593089 FRMD3A2A2Y4 597 aa22.03■■□□□ 1.12
TRIM47-207ENST00000593089 HUS1O60921 280 aa22.03■■□□□ 1.12
TRIM47-207ENST00000593089 PRPF40AO75400 957 aaKnown RBP22.03■■□□□ 1.12
TRIM47-207ENST00000593089 PRPF6O94906 941 aaKnown RBP22.03■■□□□ 1.12
TRIM47-207ENST00000593089 KRT19P08727 400 aa22.03■■□□□ 1.12
TRIM47-207ENST00000593089 WEE1P30291 646 aa22.03■■□□□ 1.12
TRIM47-207ENST00000593089 TNK2Q07912 1038 aa22.03■■□□□ 1.12
TRIM47-207ENST00000593089 ALCAMQ13740 583 aa22.03■■□□□ 1.12
TRIM47-207ENST00000593089 PUM1Q14671 1186 aaKnown RBP eCLIP22.03■■□□□ 1.12
TRIM47-207ENST00000593089 PON2Q15165 354 aa22.03■■□□□ 1.12
TRIM47-207ENST00000593089 WDR44Q5JSH3 913 aa22.03■■□□□ 1.12
TRIM47-207ENST00000593089 Q6ZS52 159 aa22.03■■□□□ 1.12
TRIM47-207ENST00000593089 CSGALNACT2Q8N6G5 542 aa22.03■■□□□ 1.12
TRIM47-207ENST00000593089 CELF5Q8N6W0 485 aaKnown RBP22.03■■□□□ 1.12
TRIM47-207ENST00000593089 PDE11AQ9HCR9 933 aa22.03■■□□□ 1.12
TRIM47-207ENST00000593089 DDX43Q9NXZ2 648 aaKnown RBP22.03■■□□□ 1.12
TRIM47-207ENST00000593089 MAGED2Q9UNF1 606 aaPredicted RBP22.03■■□□□ 1.12
TRIM47-207ENST00000593089 FRYLO94915 3013 aa22.03■■□□□ 1.12
TRIM47-207ENST00000593089 OBSL1O75147 1896 aa22.03■■□□□ 1.12
TRIM47-207ENST00000593089 ZNF638Q14966 1978 aaKnown RBP22.02■■□□□ 1.12
TRIM47-207ENST00000593089 EXTL3O43909 919 aa22.02■■□□□ 1.12
TRIM47-207ENST00000593089 HMGA1P17096 107 aaKnown RBP22.02■■□□□ 1.12
TRIM47-207ENST00000593089 ACAT1P24752 427 aaKnown RBP22.02■■□□□ 1.12
TRIM47-207ENST00000593089 PLCB2Q00722 1185 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms