RNA–Protein interactions for RNA: ENST00000592338.5

CNN1-209, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 525 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-209ENST00000592338 ERCC4Q92889 916 aaPredicted RBP17.33■□□□□ 0.36
CNN1-209ENST00000592338 NXPE3Q969Y0 559 aa17.33■□□□□ 0.36
CNN1-209ENST00000592338 LRRC3Q9BY71 257 aa17.33■□□□□ 0.36
CNN1-209ENST00000592338 ZNF334Q9HCZ1 680 aaPredicted RBP17.33■□□□□ 0.36
CNN1-209ENST00000592338 FBXL21Q9UKT6 434 aa17.33■□□□□ 0.36
CNN1-209ENST00000592338 R3HCC1Q9Y3T6 440 aaKnown RBP17.33■□□□□ 0.36
CNN1-209ENST00000592338 LRRIQ3A6PVS8 624 aaPredicted RBP17.32■□□□□ 0.36
CNN1-209ENST00000592338 SRFP11831 508 aa17.32■□□□□ 0.36
CNN1-209ENST00000592338 ALDH1A3P47895 512 aa17.32■□□□□ 0.36
CNN1-209ENST00000592338 EPHB3P54753 998 aa17.32■□□□□ 0.36
CNN1-209ENST00000592338 EPHA5P54756 1037 aa17.32■□□□□ 0.36
CNN1-209ENST00000592338 TSPY1Q01534 308 aa17.32■□□□□ 0.36
CNN1-209ENST00000592338 SNW1Q13573 536 aaKnown RBP17.32■□□□□ 0.36
CNN1-209ENST00000592338 KCNB1Q14721 858 aa17.32■□□□□ 0.36
CNN1-209ENST00000592338 INTS6LQ5JSJ4 861 aaKnown RBP17.32■□□□□ 0.36
CNN1-209ENST00000592338 IER5LQ5T953 404 aa17.32■□□□□ 0.36
CNN1-209ENST00000592338 CYP4A22Q5TCH4 519 aa17.32■□□□□ 0.36
CNN1-209ENST00000592338 MTSS1LQ765P7 747 aa17.32■□□□□ 0.36
CNN1-209ENST00000592338 SLC9A9Q8IVB4 645 aa17.32■□□□□ 0.36
CNN1-209ENST00000592338 DCP1BQ8IZD4 617 aaKnown RBP17.32■□□□□ 0.36
CNN1-209ENST00000592338 TMEM86AQ8N2M4 240 aa17.32■□□□□ 0.36
CNN1-209ENST00000592338 STKLD1Q8NE28 680 aa17.32■□□□□ 0.36
CNN1-209ENST00000592338 SHKBP1Q8TBC3 707 aa17.32■□□□□ 0.36
CNN1-209ENST00000592338 GPR152Q8TDT2 470 aa17.32■□□□□ 0.36
CNN1-209ENST00000592338 ELMO3Q96BJ8 720 aa17.32■□□□□ 0.36
CNN1-209ENST00000592338 PLA2G2FQ9BZM2 168 aa17.32■□□□□ 0.36
CNN1-209ENST00000592338 CA14Q9ULX7 337 aa17.32■□□□□ 0.36
CNN1-209ENST00000592338 MYO16Q9Y6X6 1858 aa17.32■□□□□ 0.36
CNN1-209ENST00000592338 PATJQ8NI35 1801 aa17.31■□□□□ 0.36
CNN1-209ENST00000592338 KRBA1A5PL33 1030 aa17.31■□□□□ 0.36
CNN1-209ENST00000592338 ZNF197O14709 1029 aa17.31■□□□□ 0.36
CNN1-209ENST00000592338 PRPF40AO75400 957 aaKnown RBP17.31■□□□□ 0.36
CNN1-209ENST00000592338 HAPLN1P10915 354 aaPredicted RBP17.31■□□□□ 0.36
CNN1-209ENST00000592338 FCARP24071 287 aa17.31■□□□□ 0.36
CNN1-209ENST00000592338 GPR15P49685 360 aa17.31■□□□□ 0.36
CNN1-209ENST00000592338 DLG4P78352 724 aa17.31■□□□□ 0.36
CNN1-209ENST00000592338 MYL7Q01449 175 aa17.31■□□□□ 0.36
CNN1-209ENST00000592338 FAM160A1Q05DH4 1040 aa17.31■□□□□ 0.36
CNN1-209ENST00000592338 TEAD2Q15562 447 aa17.31■□□□□ 0.36
CNN1-209ENST00000592338 CEP135Q66GS9 1140 aa17.31■□□□□ 0.36
CNN1-209ENST00000592338 CWF19L1Q69YN2 538 aaKnown RBP17.31■□□□□ 0.36
CNN1-209ENST00000592338 LIMS2Q7Z4I7 341 aa17.31■□□□□ 0.36
CNN1-209ENST00000592338 SIX5Q8N196 739 aa17.31■□□□□ 0.36
CNN1-209ENST00000592338 SPPL2BQ8TCT7 592 aa17.31■□□□□ 0.36
CNN1-209ENST00000592338 PARD3BQ8TEW8 1205 aa17.31■□□□□ 0.36
CNN1-209ENST00000592338 GIPC2Q8TF65 315 aa17.31■□□□□ 0.36
CNN1-209ENST00000592338 ZSWIM3Q96MP5 696 aa17.31■□□□□ 0.36
CNN1-209ENST00000592338 PKMYT1Q99640 499 aa17.31■□□□□ 0.36
CNN1-209ENST00000592338 PI4K2AQ9BTU6 479 aa17.31■□□□□ 0.36
CNN1-209ENST00000592338 MFSD1Q9H3U5 465 aa17.31■□□□□ 0.36
CNN1-209ENST00000592338 GDE1Q9NZC3 331 aa17.31■□□□□ 0.36
CNN1-209ENST00000592338 NME7Q9Y5B8 376 aa17.31■□□□□ 0.36
CNN1-209ENST00000592338 PCDHB5Q9Y5E4 795 aa17.31■□□□□ 0.36
CNN1-209ENST00000592338 CACNA1HO95180 2353 aa17.31■□□□□ 0.36
CNN1-209ENST00000592338 NCANO14594 1321 aa17.3■□□□□ 0.36
CNN1-209ENST00000592338 A0A1W2PRU2 124 aa17.3■□□□□ 0.36
CNN1-209ENST00000592338 GABRDO14764 452 aa17.3■□□□□ 0.36
CNN1-209ENST00000592338 CALUO43852 315 aaPredicted RBP17.3■□□□□ 0.36
CNN1-209ENST00000592338 ATP2C2O75185 946 aa17.3■□□□□ 0.36
CNN1-209ENST00000592338 MYL6P60660 151 aa17.3■□□□□ 0.36
CNN1-209ENST00000592338 PSMC1P62191 440 aaKnown RBP17.3■□□□□ 0.36
CNN1-209ENST00000592338 GPC5P78333 572 aa17.3■□□□□ 0.36
CNN1-209ENST00000592338 FAM78AQ5JUQ0 283 aa17.3■□□□□ 0.36
CNN1-209ENST00000592338 STXBP5Q5T5C0 1151 aa17.3■□□□□ 0.36
CNN1-209ENST00000592338 TDRD10Q5VZ19 366 aaKnown RBP17.3■□□□□ 0.36
CNN1-209ENST00000592338 TANGO2Q6ICL3 276 aa17.3■□□□□ 0.36
CNN1-209ENST00000592338 DNAJB7Q7Z6W7 309 aaPredicted RBP17.3■□□□□ 0.36
CNN1-209ENST00000592338 TMEM105Q8N8V8 129 aa17.3■□□□□ 0.36
CNN1-209ENST00000592338 PRSS33Q8NF86 280 aa17.3■□□□□ 0.36
CNN1-209ENST00000592338 FLCNQ8NFG4 579 aa17.3■□□□□ 0.36
CNN1-209ENST00000592338 FAM200AQ8TCP9 573 aa17.3■□□□□ 0.36
CNN1-209ENST00000592338 C2orf15Q8WU43 125 aaKnown RBP17.3■□□□□ 0.36
CNN1-209ENST00000592338 PSMG2Q969U7 264 aa17.3■□□□□ 0.36
CNN1-209ENST00000592338 MMS19Q96T76 1030 aa17.3■□□□□ 0.36
CNN1-209ENST00000592338 ACBD6Q9BR61 282 aa17.3■□□□□ 0.36
CNN1-209ENST00000592338 MRPL45Q9BRJ2 306 aaKnown RBP17.3■□□□□ 0.36
CNN1-209ENST00000592338 HSFX1Q9UBD0 423 aa17.3■□□□□ 0.36
CNN1-209ENST00000592338 GTF3C4Q9UKN8 822 aa17.3■□□□□ 0.36
CNN1-209ENST00000592338 TRAF3IP3Q9Y228 551 aa17.3■□□□□ 0.36
CNN1-209ENST00000592338 PHACTR2O75167 634 aa17.29■□□□□ 0.36
CNN1-209ENST00000592338 GADD45BO75293 160 aaPredicted RBP17.29■□□□□ 0.36
CNN1-209ENST00000592338 MICAL2O94851 1124 aa17.29■□□□□ 0.36
CNN1-209ENST00000592338 NPR3P17342 541 aa17.29■□□□□ 0.36
CNN1-209ENST00000592338 NR2F2P24468 414 aa17.29■□□□□ 0.36
CNN1-209ENST00000592338 LMO2P25791 158 aa17.29■□□□□ 0.36
CNN1-209ENST00000592338 AVPR2P30518 371 aa17.29■□□□□ 0.36
CNN1-209ENST00000592338 LHX1P48742 406 aa17.29■□□□□ 0.36
CNN1-209ENST00000592338 TUFMP49411 452 aaKnown RBP17.29■□□□□ 0.36
CNN1-209ENST00000592338 BIRC3Q13489 604 aa17.29■□□□□ 0.36
CNN1-209ENST00000592338 TRPC3Q13507 836 aa17.29■□□□□ 0.36
CNN1-209ENST00000592338 SDHAF4Q5VUM1 108 aa17.29■□□□□ 0.36
CNN1-209ENST00000592338 GAREM2Q75VX8 874 aa17.29■□□□□ 0.36
CNN1-209ENST00000592338 GUF1Q8N442 669 aaKnown RBP17.29■□□□□ 0.36
CNN1-209ENST00000592338 LEMD2Q8NC56 503 aa17.29■□□□□ 0.36
CNN1-209ENST00000592338 SPATA18Q8TC71 538 aa17.29■□□□□ 0.36
CNN1-209ENST00000592338 TMEM174Q8WUU8 243 aa17.29■□□□□ 0.36
CNN1-209ENST00000592338 ASB16Q96NS5 453 aa17.29■□□□□ 0.36
CNN1-209ENST00000592338 SYT15Q9BQS2 421 aa17.29■□□□□ 0.36
CNN1-209ENST00000592338 XYLT2Q9H1B5 865 aa17.29■□□□□ 0.36
CNN1-209ENST00000592338 SLC2A4RGQ9NR83 387 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms