RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 DPYDQ12882 1025 aa16.32■□□□□ 0.2
ERCC1-213ENST00000592023 VEPH1Q14D04 833 aa16.32■□□□□ 0.2
ERCC1-213ENST00000592023 TEAD2Q15562 447 aa16.32■□□□□ 0.2
ERCC1-213ENST00000592023 CCDC142Q17RM4 750 aa16.32■□□□□ 0.2
ERCC1-213ENST00000592023 TRAPPC11Q7Z392 1133 aa16.32■□□□□ 0.2
ERCC1-213ENST00000592023 TMEM86AQ8N2M4 240 aa16.32■□□□□ 0.2
ERCC1-213ENST00000592023 TOP6BLQ8N6T0 577 aa16.32■□□□□ 0.2
ERCC1-213ENST00000592023 SHKBP1Q8TBC3 707 aa16.32■□□□□ 0.2
ERCC1-213ENST00000592023 SPPL2BQ8TCT7 592 aa16.32■□□□□ 0.2
ERCC1-213ENST00000592023 LRRC3Q9BY71 257 aa16.32■□□□□ 0.2
ERCC1-213ENST00000592023 SLITRK6Q9H5Y7 841 aa16.32■□□□□ 0.2
ERCC1-213ENST00000592023 TMLHEQ9NVH6 421 aa16.32■□□□□ 0.2
ERCC1-213ENST00000592023 HSFX1Q9UBD0 423 aa16.32■□□□□ 0.2
ERCC1-213ENST00000592023 STK25O00506 426 aa16.31■□□□□ 0.2
ERCC1-213ENST00000592023 PRPF40AO75400 957 aaKnown RBP16.31■□□□□ 0.2
ERCC1-213ENST00000592023 ECI2O75521 394 aa16.31■□□□□ 0.2
ERCC1-213ENST00000592023 MICAL2O94851 1124 aa16.31■□□□□ 0.2
ERCC1-213ENST00000592023 ZNF202O95125 648 aa16.31■□□□□ 0.2
ERCC1-213ENST00000592023 FCARP24071 287 aa16.31■□□□□ 0.2
ERCC1-213ENST00000592023 TUFMP49411 452 aaKnown RBP16.31■□□□□ 0.2
ERCC1-213ENST00000592023 CASP4P49662 377 aa16.31■□□□□ 0.2
ERCC1-213ENST00000592023 NHLH1Q02575 133 aa16.31■□□□□ 0.2
ERCC1-213ENST00000592023 SMARCB1Q12824 385 aa16.31■□□□□ 0.2
ERCC1-213ENST00000592023 SOWAHAQ2M3V2 549 aa16.31■□□□□ 0.2
ERCC1-213ENST00000592023 INTS6LQ5JSJ4 861 aaKnown RBP16.31■□□□□ 0.2
ERCC1-213ENST00000592023 FAM78AQ5JUQ0 283 aa16.31■□□□□ 0.2
ERCC1-213ENST00000592023 TANGO2Q6ICL3 276 aa16.31■□□□□ 0.2
ERCC1-213ENST00000592023 ITIH5Q86UX2 942 aa16.31■□□□□ 0.2
ERCC1-213ENST00000592023 PLEKHO2Q8TD55 490 aa16.31■□□□□ 0.2
ERCC1-213ENST00000592023 GIPC2Q8TF65 315 aa16.31■□□□□ 0.2
ERCC1-213ENST00000592023 C2orf15Q8WU43 125 aaKnown RBP16.31■□□□□ 0.2
ERCC1-213ENST00000592023 PSMG2Q969U7 264 aa16.31■□□□□ 0.2
ERCC1-213ENST00000592023 PRRX2Q99811 253 aa16.31■□□□□ 0.2
ERCC1-213ENST00000592023 PI4K2AQ9BTU6 479 aa16.31■□□□□ 0.2
ERCC1-213ENST00000592023 PLA2G2FQ9BZM2 168 aa16.31■□□□□ 0.2
ERCC1-213ENST00000592023 GZF1Q9H116 711 aaPredicted RBP16.31■□□□□ 0.2
ERCC1-213ENST00000592023 KCTD10Q9H3F6 313 aa16.31■□□□□ 0.2
ERCC1-213ENST00000592023 TBC1D17Q9HA65 648 aa16.31■□□□□ 0.2
ERCC1-213ENST00000592023 PCDHB5Q9Y5E4 795 aa16.31■□□□□ 0.2
ERCC1-213ENST00000592023 ZDBF2Q9HCK1 2354 aa16.31■□□□□ 0.2
ERCC1-213ENST00000592023 RHOBTB3O94955 611 aa16.3■□□□□ 0.2
ERCC1-213ENST00000592023 CLSTN1O94985 981 aa16.3■□□□□ 0.2
ERCC1-213ENST00000592023 NR3C1P04150 777 aa16.3■□□□□ 0.2
ERCC1-213ENST00000592023 HAPLN1P10915 354 aaPredicted RBP16.3■□□□□ 0.2
ERCC1-213ENST00000592023 AOC1P19801 751 aa16.3■□□□□ 0.2
ERCC1-213ENST00000592023 GPR15P49685 360 aa16.3■□□□□ 0.2
ERCC1-213ENST00000592023 CLCN5P51795 746 aa16.3■□□□□ 0.2
ERCC1-213ENST00000592023 PTPN5P54829 565 aa16.3■□□□□ 0.2
ERCC1-213ENST00000592023 TCF15Q12870 199 aa16.3■□□□□ 0.2
ERCC1-213ENST00000592023 GRM2Q14416 872 aa16.3■□□□□ 0.2
ERCC1-213ENST00000592023 STXBP5Q5T5C0 1151 aa16.3■□□□□ 0.2
ERCC1-213ENST00000592023 DNAJB7Q7Z6W7 309 aaPredicted RBP16.3■□□□□ 0.2
ERCC1-213ENST00000592023 STKLD1Q8NE28 680 aa16.3■□□□□ 0.2
ERCC1-213ENST00000592023 ZSCAN18Q8TBC5 510 aaPredicted RBP16.3■□□□□ 0.2
ERCC1-213ENST00000592023 ZSWIM3Q96MP5 696 aa16.3■□□□□ 0.2
ERCC1-213ENST00000592023 ASB16Q96NS5 453 aa16.3■□□□□ 0.2
ERCC1-213ENST00000592023 ACBD6Q9BR61 282 aa16.3■□□□□ 0.2
ERCC1-213ENST00000592023 MAPK8IP1Q9UQF2 711 aa16.3■□□□□ 0.2
ERCC1-213ENST00000592023 ASB3Q9Y575 518 aa16.3■□□□□ 0.2
ERCC1-213ENST00000592023 NCANO14594 1321 aa16.29■□□□□ 0.2
ERCC1-213ENST00000592023 GOLGA6L4A6NEF3 574 aa16.29■□□□□ 0.2
ERCC1-213ENST00000592023 LRRIQ3A6PVS8 624 aaPredicted RBP16.29■□□□□ 0.2
ERCC1-213ENST00000592023 PDXKO00764 312 aa16.29■□□□□ 0.2
ERCC1-213ENST00000592023 PI15O43692 258 aa16.29■□□□□ 0.2
ERCC1-213ENST00000592023 GABRR2P28476 465 aa16.29■□□□□ 0.2
ERCC1-213ENST00000592023 PCSK1P29120 753 aa16.29■□□□□ 0.2
ERCC1-213ENST00000592023 LHX1P48742 406 aa16.29■□□□□ 0.2
ERCC1-213ENST00000592023 PSMC1P62191 440 aaKnown RBP16.29■□□□□ 0.2
ERCC1-213ENST00000592023 BIRC3Q13489 604 aa16.29■□□□□ 0.2
ERCC1-213ENST00000592023 TAF12Q16514 161 aa16.29■□□□□ 0.2
ERCC1-213ENST00000592023 NFE2Q16621 373 aaPredicted RBP16.29■□□□□ 0.2
ERCC1-213ENST00000592023 CEP135Q66GS9 1140 aa16.29■□□□□ 0.2
ERCC1-213ENST00000592023 SPATA18Q8TC71 538 aa16.29■□□□□ 0.2
ERCC1-213ENST00000592023 KBTBD7Q8WVZ9 684 aa16.29■□□□□ 0.2
ERCC1-213ENST00000592023 ZNF516Q92618 1163 aa16.29■□□□□ 0.2
ERCC1-213ENST00000592023 SMARCD2Q92925 531 aa16.29■□□□□ 0.2
ERCC1-213ENST00000592023 ELSPBP1Q96BH3 223 aa16.29■□□□□ 0.2
ERCC1-213ENST00000592023 MMS19Q96T76 1030 aa16.29■□□□□ 0.2
ERCC1-213ENST00000592023 SYT15Q9BQS2 421 aa16.29■□□□□ 0.2
ERCC1-213ENST00000592023 ATXN3LQ9H3M9 355 aa16.29■□□□□ 0.2
ERCC1-213ENST00000592023 ZFP14Q9HCL3 533 aa16.29■□□□□ 0.2
ERCC1-213ENST00000592023 GTF3C4Q9UKN8 822 aa16.29■□□□□ 0.2
ERCC1-213ENST00000592023 MUC6Q6W4X9 2439 aa16.29■□□□□ 0.2
ERCC1-213ENST00000592023 GABRDO14764 452 aa16.28■□□□□ 0.2
ERCC1-213ENST00000592023 GALR2O43603 387 aaPredicted RBP16.28■□□□□ 0.2
ERCC1-213ENST00000592023 CALUO43852 315 aaPredicted RBP16.28■□□□□ 0.2
ERCC1-213ENST00000592023 PHACTR2O75167 634 aa16.28■□□□□ 0.2
ERCC1-213ENST00000592023 KIF20AO95235 890 aa16.28■□□□□ 0.2
ERCC1-213ENST00000592023 CST3P01034 146 aaPredicted RBP16.28■□□□□ 0.2
ERCC1-213ENST00000592023 VIPR2P41587 438 aa16.28■□□□□ 0.2
ERCC1-213ENST00000592023 MYL6P60660 151 aa16.28■□□□□ 0.2
ERCC1-213ENST00000592023 TNNC1P63316 161 aa16.28■□□□□ 0.2
ERCC1-213ENST00000592023 CYP4F8P98187 520 aa16.28■□□□□ 0.2
ERCC1-213ENST00000592023 PFKPQ01813 784 aa16.28■□□□□ 0.2
ERCC1-213ENST00000592023 TRPC3Q13507 836 aa16.28■□□□□ 0.2
ERCC1-213ENST00000592023 SNW1Q13573 536 aaKnown RBP16.28■□□□□ 0.2
ERCC1-213ENST00000592023 MLF2Q15773 248 aaPredicted RBP16.28■□□□□ 0.2
ERCC1-213ENST00000592023 SDHAF4Q5VUM1 108 aa16.28■□□□□ 0.2
ERCC1-213ENST00000592023 TDRD10Q5VZ19 366 aaKnown RBP16.28■□□□□ 0.2
ERCC1-213ENST00000592023 GAREM2Q75VX8 874 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms