RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 PHKBQ93100 1093 aa8.49□□□□□ -1.05
VMP1-213ENST00000591877 CDHR1Q96JP9 859 aa8.49□□□□□ -1.05
VMP1-213ENST00000591877 DUSP23Q9BVJ7 150 aa8.49□□□□□ -1.05
VMP1-213ENST00000591877 ZMYND12Q9H0C1 365 aa8.49□□□□□ -1.05
VMP1-213ENST00000591877 CERS4Q9HA82 394 aa8.49□□□□□ -1.05
VMP1-213ENST00000591877 NAP1L2Q9ULW6 460 aaPredicted RBP8.49□□□□□ -1.05
VMP1-213ENST00000591877 MYH9P35579 1960 aaKnown RBP8.48□□□□□ -1.05
VMP1-213ENST00000591877 EVPLQ92817 2033 aa8.48□□□□□ -1.05
VMP1-213ENST00000591877 IGLV3-22A0A075B6J6 115 aa8.48□□□□□ -1.05
VMP1-213ENST00000591877 CCDC196A0A1B0GTZ2 297 aa8.48□□□□□ -1.05
VMP1-213ENST00000591877 ABHD14A-ACY1A0A1B0GW23 586 aa8.48□□□□□ -1.05
VMP1-213ENST00000591877 ESYT2A0FGR8 921 aa8.48□□□□□ -1.05
VMP1-213ENST00000591877 FAM86B1E9PN63 330 aa8.48□□□□□ -1.05
VMP1-213ENST00000591877 EPB41L2O43491 1005 aaKnown RBP8.48□□□□□ -1.05
VMP1-213ENST00000591877 RNASE1P07998 156 aaKnown RBP8.48□□□□□ -1.05
VMP1-213ENST00000591877 FAM86B2P0C5J1 330 aa8.48□□□□□ -1.05
VMP1-213ENST00000591877 MARK3P27448 753 aa8.48□□□□□ -1.05
VMP1-213ENST00000591877 PSMA5P28066 241 aa8.48□□□□□ -1.05
VMP1-213ENST00000591877 CEP55Q53EZ4 464 aa8.48□□□□□ -1.05
VMP1-213ENST00000591877 MARCH8Q5T0T0 291 aa8.48□□□□□ -1.05
VMP1-213ENST00000591877 SFRP5Q5T4F7 317 aa8.48□□□□□ -1.05
VMP1-213ENST00000591877 UBE2R2Q712K3 238 aaPredicted RBP8.48□□□□□ -1.05
VMP1-213ENST00000591877 RUFY3Q7L099 469 aa8.48□□□□□ -1.05
VMP1-213ENST00000591877 FGD2Q7Z6J4 655 aa8.48□□□□□ -1.05
VMP1-213ENST00000591877 KIF18BQ86Y91 864 aa8.48□□□□□ -1.05
VMP1-213ENST00000591877 LEO1Q8WVC0 666 aaPredicted RBP8.48□□□□□ -1.05
VMP1-213ENST00000591877 PPM1EQ8WY54 764 aa8.48□□□□□ -1.05
VMP1-213ENST00000591877 RELTQ969Z4 430 aa8.48□□□□□ -1.05
VMP1-213ENST00000591877 ZBTB10Q96DT7 871 aa8.48□□□□□ -1.05
VMP1-213ENST00000591877 AGO4Q9HCK5 861 aaKnown RBP8.48□□□□□ -1.05
VMP1-213ENST00000591877 GEMIN8Q9NWZ8 242 aaKnown RBP8.48□□□□□ -1.05
VMP1-213ENST00000591877 SLC9A2Q9UBY0 812 aa8.48□□□□□ -1.05
VMP1-213ENST00000591877 TCEAL9Q9UHQ7 104 aa8.48□□□□□ -1.05
VMP1-213ENST00000591877 ZNF215Q9UL58 517 aaPredicted RBP8.48□□□□□ -1.05
VMP1-213ENST00000591877 NLRC5Q86WI3 1866 aa8.48□□□□□ -1.05
VMP1-213ENST00000591877 NFASCO94856 1347 aa8.48□□□□□ -1.05
VMP1-213ENST00000591877 EMSYQ7Z589 1322 aa8.48□□□□□ -1.05
VMP1-213ENST00000591877 NRCAMQ92823 1304 aa8.48□□□□□ -1.05
VMP1-213ENST00000591877 IGKV6D-21A0A0A0MT36 114 aa8.47□□□□□ -1.05
VMP1-213ENST00000591877 MBLAC1A4D2B0 266 aaPredicted RBP8.47□□□□□ -1.05
VMP1-213ENST00000591877 LPXNO60711 386 aa8.47□□□□□ -1.05
VMP1-213ENST00000591877 CAND2O75155 1236 aa8.47□□□□□ -1.05
VMP1-213ENST00000591877 GJB5O95377 273 aa8.47□□□□□ -1.05
VMP1-213ENST00000591877 CCNE2O96020 404 aa8.47□□□□□ -1.05
VMP1-213ENST00000591877 CHRNA1P02708 482 aa8.47□□□□□ -1.05
VMP1-213ENST00000591877 CYP3A4P08684 503 aa8.47□□□□□ -1.05
VMP1-213ENST00000591877 GNAT1P11488 350 aa8.47□□□□□ -1.05
VMP1-213ENST00000591877 INSRRP14616 1297 aa8.47□□□□□ -1.05
VMP1-213ENST00000591877 IFNAR1P17181 557 aa8.47□□□□□ -1.05
VMP1-213ENST00000591877 GUCY2FP51841 1108 aa8.47□□□□□ -1.05
VMP1-213ENST00000591877 NEK4P51957 841 aa8.47□□□□□ -1.05
VMP1-213ENST00000591877 ACTR2P61160 394 aa8.47□□□□□ -1.05
VMP1-213ENST00000591877 CCT2P78371 535 aaKnown RBP8.47□□□□□ -1.05
VMP1-213ENST00000591877 MGAT3Q09327 533 aa8.47□□□□□ -1.05
VMP1-213ENST00000591877 CDK5R2Q13319 367 aa8.47□□□□□ -1.05
VMP1-213ENST00000591877 KRTAP19-4Q3LI73 84 aa8.47□□□□□ -1.05
VMP1-213ENST00000591877 CWF19L1Q69YN2 538 aaKnown RBP8.47□□□□□ -1.05
VMP1-213ENST00000591877 KRT40Q6A162 431 aa8.47□□□□□ -1.05
VMP1-213ENST00000591877 PKN3Q6P5Z2 889 aa8.47□□□□□ -1.05
VMP1-213ENST00000591877 NIPA1Q7RTP0 329 aa8.47□□□□□ -1.05
VMP1-213ENST00000591877 TMC3Q7Z5M5 1100 aa8.47□□□□□ -1.05
VMP1-213ENST00000591877 RPAINQ86UA6 219 aa8.47□□□□□ -1.05
VMP1-213ENST00000591877 KREMEN2Q8NCW0 462 aa8.47□□□□□ -1.05
VMP1-213ENST00000591877 Q96M66 194 aa8.47□□□□□ -1.05
VMP1-213ENST00000591877 RNF26Q9BY78 433 aaPredicted RBP8.47□□□□□ -1.05
VMP1-213ENST00000591877 SMARCAD1Q9H4L7 1026 aa8.47□□□□□ -1.05
VMP1-213ENST00000591877 ERAP1Q9NZ08 941 aa8.47□□□□□ -1.05
VMP1-213ENST00000591877 ADAMTS6Q9UKP5 1117 aa8.47□□□□□ -1.05
VMP1-213ENST00000591877 GPR55Q9Y2T6 319 aaPredicted RBP8.47□□□□□ -1.05
VMP1-213ENST00000591877 NPFFR2Q9Y5X5 522 aa8.47□□□□□ -1.05
VMP1-213ENST00000591877 ST14Q9Y5Y6 855 aa8.47□□□□□ -1.05
VMP1-213ENST00000591877 SPTBN5Q9NRC6 3674 aaKnown RBP8.47□□□□□ -1.05
VMP1-213ENST00000591877 ATG2AQ2TAZ0 1938 aa8.46□□□□□ -1.05
VMP1-213ENST00000591877 LINC01553A4QN01 128 aa8.46□□□□□ -1.06
VMP1-213ENST00000591877 KIF28PB7ZC32 967 aa8.46□□□□□ -1.06
VMP1-213ENST00000591877 PRAMEF1O95521 474 aa8.46□□□□□ -1.06
VMP1-213ENST00000591877 CD8BP10966 210 aa8.46□□□□□ -1.06
VMP1-213ENST00000591877 FUT4P22083 530 aa8.46□□□□□ -1.06
VMP1-213ENST00000591877 ECI1P42126 302 aa8.46□□□□□ -1.06
VMP1-213ENST00000591877 HTRA4P83105 476 aaPredicted RBP8.46□□□□□ -1.06
VMP1-213ENST00000591877 CYP4F3Q08477 520 aa8.46□□□□□ -1.06
VMP1-213ENST00000591877 MESP2Q0VG99 397 aa8.46□□□□□ -1.06
VMP1-213ENST00000591877 PPFIA1Q13136 1202 aa8.46□□□□□ -1.06
VMP1-213ENST00000591877 ZNF460Q14592 562 aa8.46□□□□□ -1.06
VMP1-213ENST00000591877 PLCB4Q15147 1175 aa8.46□□□□□ -1.06
VMP1-213ENST00000591877 E4F1Q66K89 784 aaPredicted RBP8.46□□□□□ -1.06
VMP1-213ENST00000591877 ABHD15Q6UXT9 468 aa8.46□□□□□ -1.06
VMP1-213ENST00000591877 STRA8Q7Z7C7 330 aa8.46□□□□□ -1.06
VMP1-213ENST00000591877 PLA2G4DQ86XP0 818 aa8.46□□□□□ -1.06
VMP1-213ENST00000591877 FMNL3Q8IVF7 1028 aa8.46□□□□□ -1.06
VMP1-213ENST00000591877 DAGLBQ8NCG7 672 aa8.46□□□□□ -1.06
VMP1-213ENST00000591877 TRAPPC12Q8WVT3 735 aa8.46□□□□□ -1.06
VMP1-213ENST00000591877 DNAJB3Q8WWF6 145 aa8.46□□□□□ -1.06
VMP1-213ENST00000591877 ARNTL2Q8WYA1 636 aa8.46□□□□□ -1.06
VMP1-213ENST00000591877 GLG1Q92896 1179 aa8.46□□□□□ -1.06
VMP1-213ENST00000591877 FAM84AQ96KN4 292 aa8.46□□□□□ -1.06
VMP1-213ENST00000591877 UIMC1Q96RL1 719 aa8.46□□□□□ -1.06
VMP1-213ENST00000591877 RAD9AQ99638 391 aa8.46□□□□□ -1.06
VMP1-213ENST00000591877 SLC26A6Q9BXS9 759 aa8.46□□□□□ -1.06
VMP1-213ENST00000591877 UPF3BQ9BZI7 483 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms