RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 DACH1Q9UI36 760 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 BICDL2A1A5D9 508 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 LACTBL1A8MY62 500 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 PDXKO00764 312 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 KIAA0391O15091 583 aaKnown RBP6.92□□□□□ -1.3
VPS4B-205ENST00000591383 ATXN7O15265 892 aaPredicted RBP6.92□□□□□ -1.3
VPS4B-205ENST00000591383 MEFVO15553 781 aaPredicted RBP6.92□□□□□ -1.3
VPS4B-205ENST00000591383 XPOTO43592 962 aaKnown RBP6.92□□□□□ -1.3
VPS4B-205ENST00000591383 B4GALT3O60512 393 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 FBXO24O75426 580 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 OFD1O75665 1012 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 IL18RAPO95256 599 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 THBS1P07996 1170 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 TMEM191BP0C7N4 346 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 EPB41P11171 864 aaKnown RBP6.92□□□□□ -1.3
VPS4B-205ENST00000591383 BMP1P13497 986 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 CCNE1P24864 410 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 CA8P35219 290 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 OR1G1P47890 313 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 SLC11A1P49279 550 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 GUCY2FP51841 1108 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 PMS1P54277 932 aaKnown RBP6.92□□□□□ -1.3
VPS4B-205ENST00000591383 BCAR1P56945 870 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 NLRP12P59046 1061 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 TFAMQ00059 246 aaKnown RBP6.92□□□□□ -1.3
VPS4B-205ENST00000591383 TAP1Q03518 808 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 LRRC63Q05C16 580 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 CYP24A1Q07973 514 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 SKOR2Q2VWA4 1001 aaPredicted RBP6.92□□□□□ -1.3
VPS4B-205ENST00000591383 CCDC40Q4G0X9 1142 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 ZCWPW2Q504Y3 356 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 DCAF17Q5H9S7 520 aaPredicted RBP6.92□□□□□ -1.3
VPS4B-205ENST00000591383 HABP4Q5JVS0 413 aaKnown RBP6.92□□□□□ -1.3
VPS4B-205ENST00000591383 JADE1Q6IE81 842 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 FBXL19Q6PCT2 694 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 RBM43Q6ZSC3 357 aaKnown RBP6.92□□□□□ -1.3
VPS4B-205ENST00000591383 C11orf57Q6ZUT1 292 aaPredicted RBP6.92□□□□□ -1.3
VPS4B-205ENST00000591383 ZNF280BQ86YH2 543 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 CCNJLQ8IV13 435 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 C12orf56Q8IXR9 622 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 FAM186BQ8IYM0 893 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 CRIPAKQ8N1N5 446 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 TMEM130Q8N3G9 435 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 RABGGTAQ92696 567 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 C18orf25Q96B23 403 aaPredicted RBP6.92□□□□□ -1.3
VPS4B-205ENST00000591383 CCDC127Q96BQ5 260 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 ZNF689Q96CS4 500 aaPredicted RBP6.92□□□□□ -1.3
VPS4B-205ENST00000591383 RHOVQ96L33 236 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 TGS1Q96RS0 853 aaKnown RBP6.92□□□□□ -1.3
VPS4B-205ENST00000591383 FNBP1Q96RU3 617 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 NT5C1AQ9BXI3 368 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 MTMR12Q9C0I1 747 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 SEMA6BQ9H3T3 888 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 MMRN2Q9H8L6 949 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 GOLGA2P5Q9HBQ8 144 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 AAASQ9NRG9 546 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 SLC38A7Q9NVC3 462 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 ANO10Q9NW15 660 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 DNAJB4Q9UDY4 337 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 CPSF3Q9UKF6 684 aaKnown RBP6.92□□□□□ -1.3
VPS4B-205ENST00000591383 EFR3BQ9Y2G0 817 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 FRMD4BQ9Y2L6 1034 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 STYXL1Q9Y6J8 313 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 MYO9BQ13459 2157 aa6.92□□□□□ -1.3
VPS4B-205ENST00000591383 SZT2Q5T011 3432 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 TTC26A0AVF1 554 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 ZNF233A6NK53 670 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 NT5C1B-RDH14C9J2C7 533 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 F8W810 466 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 PODXLO00592 558 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 CETN3O15182 167 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 KIF4AO95239 1232 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 LDHAP00338 332 aaKnown RBP6.91□□□□□ -1.3
VPS4B-205ENST00000591383 THP07101 528 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 TRIM49P0CI25 452 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 TRIM49CP0CI26 452 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 KRT13P13646 458 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 ACPPP15309 386 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 RPL13P26373 211 aaKnown RBP6.91□□□□□ -1.3
VPS4B-205ENST00000591383 PPM1AP35813 382 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 CASP4P49662 377 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 SNRPFP62306 86 aaKnown RBP6.91□□□□□ -1.3
VPS4B-205ENST00000591383 SOX4Q06945 474 aaPredicted RBP6.91□□□□□ -1.3
VPS4B-205ENST00000591383 TUSC3Q13454 348 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 SERINC3Q13530 473 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 LBRQ14739 615 aaKnown RBP6.91□□□□□ -1.3
VPS4B-205ENST00000591383 EDRF1Q3B7T1 1238 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 SLC10A6Q3KNW5 377 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 ZSCAN23Q3MJ62 389 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 ANO6Q4KMQ2 910 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 COBLL1Q53SF7 1204 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 HSP90AA4PQ58FG1 418 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 TCERG1LQ5VWI1 586 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 EGFLAMQ63HQ2 1017 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 ANKRD40Q6AI12 368 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 CRELD2Q6UXH1 353 aaPredicted RBP6.91□□□□□ -1.3
VPS4B-205ENST00000591383 LRRC55Q6ZSA7 311 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 Q7L0L9 218 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 TRIM46Q7Z4K8 759 aa6.91□□□□□ -1.3
VPS4B-205ENST00000591383 JAZF1Q86VZ6 243 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms