RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 KCNK12Q9HB15 430 aa9.86□□□□□ -0.83
DNMT1-223ENST00000591239 AVENQ9NQS1 362 aaPredicted RBP9.86□□□□□ -0.83
DNMT1-223ENST00000591239 DDX43Q9NXZ2 648 aaKnown RBP9.86□□□□□ -0.83
DNMT1-223ENST00000591239 CEP72Q9P209 647 aa9.86□□□□□ -0.83
DNMT1-223ENST00000591239 HSFX1Q9UBD0 423 aa9.86□□□□□ -0.83
DNMT1-223ENST00000591239 MAN1B1Q9UKM7 699 aa9.86□□□□□ -0.83
DNMT1-223ENST00000591239 CDH7Q9ULB5 785 aa9.86□□□□□ -0.83
DNMT1-223ENST00000591239 MRPS23Q9Y3D9 190 aaKnown RBP9.86□□□□□ -0.83
DNMT1-223ENST00000591239 YIPF1Q9Y548 306 aa9.86□□□□□ -0.83
DNMT1-223ENST00000591239 ZFP37Q9Y6Q3 630 aaPredicted RBP9.86□□□□□ -0.83
DNMT1-223ENST00000591239 DOCK8Q8NF50 2099 aa9.86□□□□□ -0.83
DNMT1-223ENST00000591239 NOTCH4Q99466 2003 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 CETN3O15182 167 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 SOAT2O75908 522 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 VNN1O95497 513 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 STAU1O95793 577 aaKnown RBP9.85□□□□□ -0.83
DNMT1-223ENST00000591239 KRT13P13646 458 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 BMP6P22004 513 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 ACAT1P24752 427 aaKnown RBP9.85□□□□□ -0.83
DNMT1-223ENST00000591239 LMO2P25791 158 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 PCSK1P29120 753 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 TUFMP49411 452 aaKnown RBP9.85□□□□□ -0.83
DNMT1-223ENST00000591239 EPHB3P54753 998 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 TNNC1P63316 161 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 PLD1Q13393 1074 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 STIM1Q13586 685 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 NCOA4Q13772 614 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 NFE2Q16621 373 aaPredicted RBP9.85□□□□□ -0.83
DNMT1-223ENST00000591239 SLC5A9Q2M3M2 681 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 ZACNQ401N2 412 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 C1orf220Q5T0J3 134 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 CYP4A22Q5TCH4 519 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 ANKRD40Q6AI12 368 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 TRIM67Q6ZTA4 783 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 PDZD4Q76G19 769 aaPredicted RBP9.85□□□□□ -0.83
DNMT1-223ENST00000591239 SV2AQ7L0J3 742 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 OSTM1Q86WC4 334 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 UBALD2Q8IYN6 164 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 HS6ST3Q8IZP7 471 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 SPPL2BQ8TCT7 592 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 C2orf15Q8WU43 125 aaKnown RBP9.85□□□□□ -0.83
DNMT1-223ENST00000591239 KBTBD7Q8WVZ9 684 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 RSAD2Q8WXG1 361 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 ING5Q8WYH8 240 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 NXPE3Q969Y0 559 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 TCEAL4Q96EI5 215 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 SEPT5Q99719 369 aaPredicted RBP9.85□□□□□ -0.83
DNMT1-223ENST00000591239 TSG101Q99816 390 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 LRFN3Q9BTN0 628 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 DNAJC25Q9H1X3 360 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 SMOC2Q9H3U7 446 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 VRTNQ9H8Y1 702 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 ASAH2Q9NR71 780 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 TMLHEQ9NVH6 421 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 ABI2Q9NYB9 513 aaPredicted RBP9.85□□□□□ -0.83
DNMT1-223ENST00000591239 IGSF9Q9P2J2 1179 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 NXF1Q9UBU9 619 aaKnown RBP9.85□□□□□ -0.83
DNMT1-223ENST00000591239 GTF3C4Q9UKN8 822 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 ASB3Q9Y575 518 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 PCDHB5Q9Y5E4 795 aa9.85□□□□□ -0.83
DNMT1-223ENST00000591239 PRR33A8MZF0 331 aa9.84□□□□□ -0.83
DNMT1-223ENST00000591239 ANHXE9PGG2 379 aa9.84□□□□□ -0.83
DNMT1-223ENST00000591239 BIN1O00499 593 aa9.84□□□□□ -0.83
DNMT1-223ENST00000591239 ZNF197O14709 1029 aa9.84□□□□□ -0.83
DNMT1-223ENST00000591239 PSMA7O14818 248 aa9.84□□□□□ -0.83
DNMT1-223ENST00000591239 HCRTO43612 131 aa9.84□□□□□ -0.83
DNMT1-223ENST00000591239 ATP2C2O75185 946 aa9.84□□□□□ -0.83
DNMT1-223ENST00000591239 TACC1O75410 805 aa9.84□□□□□ -0.83
DNMT1-223ENST00000591239 MICAL2O94851 1124 aa9.84□□□□□ -0.83
DNMT1-223ENST00000591239 PDGFRBP09619 1106 aa9.84□□□□□ -0.83
DNMT1-223ENST00000591239 FAM163BP0C2L3 166 aa9.84□□□□□ -0.83
DNMT1-223ENST00000591239 TRIM49P0CI25 452 aa9.84□□□□□ -0.83
DNMT1-223ENST00000591239 TRIM49CP0CI26 452 aa9.84□□□□□ -0.83
DNMT1-223ENST00000591239 CD44P16070 742 aaKnown RBP9.84□□□□□ -0.83
DNMT1-223ENST00000591239 CEBPBP17676 345 aa9.84□□□□□ -0.83
DNMT1-223ENST00000591239 WARSP23381 471 aaKnown RBP9.84□□□□□ -0.83
DNMT1-223ENST00000591239 GNL1P36915 607 aaPredicted RBP9.84□□□□□ -0.83
DNMT1-223ENST00000591239 CCR2P41597 374 aa9.84□□□□□ -0.83
DNMT1-223ENST00000591239 PMS1P54277 932 aaKnown RBP9.84□□□□□ -0.83
DNMT1-223ENST00000591239 EPHA5P54756 1037 aa9.84□□□□□ -0.83
DNMT1-223ENST00000591239 FKBP3Q00688 224 aaKnown RBP9.84□□□□□ -0.83
DNMT1-223ENST00000591239 LRRC63Q05C16 580 aa9.84□□□□□ -0.83
DNMT1-223ENST00000591239 ENPEPQ07075 957 aa9.84□□□□□ -0.83
DNMT1-223ENST00000591239 SIGLEC14Q08ET2 396 aa9.84□□□□□ -0.83
DNMT1-223ENST00000591239 TDGQ13569 410 aa9.84□□□□□ -0.83
DNMT1-223ENST00000591239 HTR4Q13639 388 aa9.84□□□□□ -0.83
DNMT1-223ENST00000591239 MORC3Q14149 939 aa9.84□□□□□ -0.83
DNMT1-223ENST00000591239 CAMK4Q16566 473 aa9.84□□□□□ -0.83
DNMT1-223ENST00000591239 SGSM1Q2NKQ1 1148 aa9.84□□□□□ -0.83
DNMT1-223ENST00000591239 ZNF699Q32M78 642 aa9.84□□□□□ -0.83
DNMT1-223ENST00000591239 MGAT5BQ3V5L5 792 aa9.84□□□□□ -0.83
DNMT1-223ENST00000591239 INTS6LQ5JSJ4 861 aaKnown RBP9.84□□□□□ -0.83
DNMT1-223ENST00000591239 PRSS36Q5K4E3 855 aa9.84□□□□□ -0.83
DNMT1-223ENST00000591239 CLEC17AQ6ZS10 378 aa9.84□□□□□ -0.83
DNMT1-223ENST00000591239 DNAJB7Q7Z6W7 309 aaPredicted RBP9.84□□□□□ -0.83
DNMT1-223ENST00000591239 NPAS3Q8IXF0 933 aa9.84□□□□□ -0.83
DNMT1-223ENST00000591239 SLC44A3Q8N4M1 653 aa9.84□□□□□ -0.83
DNMT1-223ENST00000591239 LEMD2Q8NC56 503 aa9.84□□□□□ -0.83
DNMT1-223ENST00000591239 ST13P5Q8NFI4 369 aaPredicted RBP9.84□□□□□ -0.83
DNMT1-223ENST00000591239 PSMG2Q969U7 264 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms