RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 PDGFRBP09619 1106 aa16.19■□□□□ 0.18
ATG4D-211ENST00000589753 ACAT1P24752 427 aaKnown RBP16.19■□□□□ 0.18
ATG4D-211ENST00000589753 CASP14P31944 242 aa16.19■□□□□ 0.18
ATG4D-211ENST00000589753 CA8P35219 290 aa16.19■□□□□ 0.18
ATG4D-211ENST00000589753 STAT1P42224 750 aa16.19■□□□□ 0.18
ATG4D-211ENST00000589753 ERVFC1P60507 584 aa16.19■□□□□ 0.18
ATG4D-211ENST00000589753 CREMQ03060 361 aa16.19■□□□□ 0.18
ATG4D-211ENST00000589753 SMC1AQ14683 1233 aaKnown RBP16.19■□□□□ 0.18
ATG4D-211ENST00000589753 PTPN14Q15678 1187 aa16.19■□□□□ 0.18
ATG4D-211ENST00000589753 ZNF394Q53GI3 561 aa16.19■□□□□ 0.18
ATG4D-211ENST00000589753 RBBP8NLQ8NC74 664 aaPredicted RBP16.19■□□□□ 0.18
ATG4D-211ENST00000589753 ZNF397Q8NF99 534 aaPredicted RBP16.19■□□□□ 0.18
ATG4D-211ENST00000589753 MICAL1Q8TDZ2 1067 aa16.19■□□□□ 0.18
ATG4D-211ENST00000589753 GDPD5Q8WTR4 605 aa16.19■□□□□ 0.18
ATG4D-211ENST00000589753 AUTS2Q8WXX7 1259 aa16.19■□□□□ 0.18
ATG4D-211ENST00000589753 BAP1Q92560 729 aa16.19■□□□□ 0.18
ATG4D-211ENST00000589753 TNIP3Q96KP6 325 aa16.19■□□□□ 0.18
ATG4D-211ENST00000589753 TWNKQ96RR1 684 aa16.19■□□□□ 0.18
ATG4D-211ENST00000589753 ELOVL4Q9GZR5 314 aa16.19■□□□□ 0.18
ATG4D-211ENST00000589753 LMAN2LQ9H0V9 348 aa16.19■□□□□ 0.18
ATG4D-211ENST00000589753 NGRNQ9NPE2 291 aaKnown RBP16.19■□□□□ 0.18
ATG4D-211ENST00000589753 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.19■□□□□ 0.18
ATG4D-211ENST00000589753 MTRRQ9UBK8 725 aa16.19■□□□□ 0.18
ATG4D-211ENST00000589753 CDH9Q9ULB4 789 aa16.19■□□□□ 0.18
ATG4D-211ENST00000589753 MYO6Q9UM54 1294 aa16.19■□□□□ 0.18
ATG4D-211ENST00000589753 LUC7L2Q9Y383 392 aaKnown RBP16.19■□□□□ 0.18
ATG4D-211ENST00000589753 BACE2Q9Y5Z0 518 aa16.19■□□□□ 0.18
ATG4D-211ENST00000589753 RNF225M0QZC1 329 aaPredicted RBP16.18■□□□□ 0.18
ATG4D-211ENST00000589753 SOX1O00570 391 aaPredicted RBP16.18■□□□□ 0.18
ATG4D-211ENST00000589753 FSCN2O14926 492 aa16.18■□□□□ 0.18
ATG4D-211ENST00000589753 TBC1D4O60343 1298 aa16.18■□□□□ 0.18
ATG4D-211ENST00000589753 LPXNO60711 386 aa16.18■□□□□ 0.18
ATG4D-211ENST00000589753 CSPG5O95196 566 aa16.18■□□□□ 0.18
ATG4D-211ENST00000589753 PNMA6AP0CW24 399 aaPredicted RBP16.18■□□□□ 0.18
ATG4D-211ENST00000589753 SOX5P35711 763 aa16.18■□□□□ 0.18
ATG4D-211ENST00000589753 FXR1P51114 621 aaKnown RBP eCLIP16.18■□□□□ 0.18
ATG4D-211ENST00000589753 RAD23BP54727 409 aa16.18■□□□□ 0.18
ATG4D-211ENST00000589753 ZBED6P86452 979 aa16.18■□□□□ 0.18
ATG4D-211ENST00000589753 TSPY1Q01534 308 aa16.18■□□□□ 0.18
ATG4D-211ENST00000589753 TBX2Q13207 712 aaPredicted RBP16.18■□□□□ 0.18
ATG4D-211ENST00000589753 ORC1Q13415 861 aa16.18■□□□□ 0.18
ATG4D-211ENST00000589753 CAMK1Q14012 370 aa16.18■□□□□ 0.18
ATG4D-211ENST00000589753 PLPP4Q5VZY2 271 aa16.18■□□□□ 0.18
ATG4D-211ENST00000589753 PDE12Q6L8Q7 609 aaKnown RBP16.18■□□□□ 0.18
ATG4D-211ENST00000589753 FAM71AQ8IYT1 594 aa16.18■□□□□ 0.18
ATG4D-211ENST00000589753 CRYBG2Q8N1P7 616 aa16.18■□□□□ 0.18
ATG4D-211ENST00000589753 SLC4A11Q8NBS3 891 aa16.18■□□□□ 0.18
ATG4D-211ENST00000589753 OR10T2Q8NGX3 314 aa16.18■□□□□ 0.18
ATG4D-211ENST00000589753 TMEM176AQ96HP8 235 aa16.18■□□□□ 0.18
ATG4D-211ENST00000589753 SYT15Q9BQS2 421 aa16.18■□□□□ 0.18
ATG4D-211ENST00000589753 DPEP3Q9H4B8 488 aa16.18■□□□□ 0.18
ATG4D-211ENST00000589753 IRAK3Q9Y616 596 aa16.18■□□□□ 0.18
ATG4D-211ENST00000589753 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.17■□□□□ 0.18
ATG4D-211ENST00000589753 LRRC53A6NM62 1247 aa16.17■□□□□ 0.18
ATG4D-211ENST00000589753 RFXAPO00287 272 aa16.17■□□□□ 0.18
ATG4D-211ENST00000589753 CYP26A1O43174 497 aa16.17■□□□□ 0.18
ATG4D-211ENST00000589753 LILRB3O75022 631 aa16.17■□□□□ 0.18
ATG4D-211ENST00000589753 GFPT2O94808 682 aa16.17■□□□□ 0.18
ATG4D-211ENST00000589753 PAEPP09466 180 aa16.17■□□□□ 0.18
ATG4D-211ENST00000589753 RPL17P18621 184 aaKnown RBP16.17■□□□□ 0.18
ATG4D-211ENST00000589753 ZNF132P52740 706 aa16.17■□□□□ 0.18
ATG4D-211ENST00000589753 PSMC1P62191 440 aaKnown RBP16.17■□□□□ 0.18
ATG4D-211ENST00000589753 INTS6LQ5JSJ4 861 aaKnown RBP16.17■□□□□ 0.18
ATG4D-211ENST00000589753 ACOT1Q86TX2 421 aa16.17■□□□□ 0.18
ATG4D-211ENST00000589753 FMNL3Q8IVF7 1028 aa16.17■□□□□ 0.18
ATG4D-211ENST00000589753 DCP1BQ8IZD4 617 aaKnown RBP16.17■□□□□ 0.18
ATG4D-211ENST00000589753 MRPL43Q8N983 215 aaKnown RBP16.17■□□□□ 0.18
ATG4D-211ENST00000589753 B3GALNT2Q8NCR0 500 aa16.17■□□□□ 0.18
ATG4D-211ENST00000589753 HEXIM2Q96MH2 286 aaKnown RBP16.17■□□□□ 0.18
ATG4D-211ENST00000589753 TMEM209Q96SK2 561 aa16.17■□□□□ 0.18
ATG4D-211ENST00000589753 CLSTN3Q9BQT9 956 aa16.17■□□□□ 0.18
ATG4D-211ENST00000589753 ZCWPW1Q9H0M4 648 aa16.17■□□□□ 0.18
ATG4D-211ENST00000589753 NUCKS1Q9H1E3 243 aaKnown RBP16.17■□□□□ 0.18
ATG4D-211ENST00000589753 RXFP1Q9HBX9 757 aa16.17■□□□□ 0.18
ATG4D-211ENST00000589753 FNIP2Q9P278 1114 aa16.17■□□□□ 0.18
ATG4D-211ENST00000589753 CDY1Q9Y6F8 540 aa16.17■□□□□ 0.18
ATG4D-211ENST00000589753 COL4A4P53420 1690 aaPredicted RBP16.17■□□□□ 0.18
ATG4D-211ENST00000589753 C2orf71A6NGG8 1288 aa16.16■□□□□ 0.18
ATG4D-211ENST00000589753 ATP2C2O75185 946 aa16.16■□□□□ 0.18
ATG4D-211ENST00000589753 OR4Q2P0C623 313 aa16.16■□□□□ 0.18
ATG4D-211ENST00000589753 CPB1P15086 417 aa16.16■□□□□ 0.18
ATG4D-211ENST00000589753 PTPN1P18031 435 aaKnown RBP16.16■□□□□ 0.18
ATG4D-211ENST00000589753 CLCN1P35523 988 aa16.16■□□□□ 0.18
ATG4D-211ENST00000589753 KRT9P35527 623 aa16.16■□□□□ 0.18
ATG4D-211ENST00000589753 IRS1P35568 1242 aa16.16■□□□□ 0.18
ATG4D-211ENST00000589753 ARPP19P56211 112 aa16.16■□□□□ 0.18
ATG4D-211ENST00000589753 BPIFB4P59827 614 aa16.16■□□□□ 0.18
ATG4D-211ENST00000589753 PTPROQ16827 1216 aa16.16■□□□□ 0.18
ATG4D-211ENST00000589753 ZNF697Q5TEC3 545 aa16.16■□□□□ 0.18
ATG4D-211ENST00000589753 SFMBT2Q5VUG0 894 aa16.16■□□□□ 0.18
ATG4D-211ENST00000589753 SLC8B1Q6J4K2 584 aa16.16■□□□□ 0.18
ATG4D-211ENST00000589753 RSPO2Q6UXX9 243 aaPredicted RBP16.16■□□□□ 0.18
ATG4D-211ENST00000589753 CNGA4Q8IV77 575 aa16.16■□□□□ 0.18
ATG4D-211ENST00000589753 SPC24Q8NBT2 197 aa16.16■□□□□ 0.18
ATG4D-211ENST00000589753 LRCH3Q96II8 777 aa16.16■□□□□ 0.18
ATG4D-211ENST00000589753 EMILIN2Q9BXX0 1053 aa16.16■□□□□ 0.18
ATG4D-211ENST00000589753 TTYH1Q9H313 450 aaPredicted RBP16.16■□□□□ 0.18
ATG4D-211ENST00000589753 CRTAC1Q9NQ79 661 aa16.16■□□□□ 0.18
ATG4D-211ENST00000589753 IMPACTQ9P2X3 320 aa16.16■□□□□ 0.18
ATG4D-211ENST00000589753 KIAA1257Q9ULG3 409 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms