RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 SGSM1Q2NKQ1 1148 aa17.6■□□□□ 0.41
DNMT1-221ENST00000589538 ZNF699Q32M78 642 aa17.6■□□□□ 0.41
DNMT1-221ENST00000589538 WDR72Q3MJ13 1102 aa17.6■□□□□ 0.41
DNMT1-221ENST00000589538 ATAD1Q8NBU5 361 aa17.6■□□□□ 0.41
DNMT1-221ENST00000589538 KHSRPQ92945 711 aaKnown RBP eCLIP17.6■□□□□ 0.41
DNMT1-221ENST00000589538 XYLT2Q9H1B5 865 aa17.6■□□□□ 0.41
DNMT1-221ENST00000589538 KIAA1468Q9P260 1216 aa17.6■□□□□ 0.41
DNMT1-221ENST00000589538 IGSF9Q9P2J2 1179 aa17.6■□□□□ 0.41
DNMT1-221ENST00000589538 LIMD1Q9UGP4 676 aa17.6■□□□□ 0.41
DNMT1-221ENST00000589538 PCDHB5Q9Y5E4 795 aa17.6■□□□□ 0.41
DNMT1-221ENST00000589538 MICAL2O94851 1124 aa17.59■□□□□ 0.41
DNMT1-221ENST00000589538 MYL6P60660 151 aa17.59■□□□□ 0.41
DNMT1-221ENST00000589538 DLG4P78352 724 aa17.59■□□□□ 0.41
DNMT1-221ENST00000589538 VEPH1Q14D04 833 aa17.59■□□□□ 0.41
DNMT1-221ENST00000589538 ZNF667Q5HYK9 610 aa17.59■□□□□ 0.41
DNMT1-221ENST00000589538 INTS6LQ5JSJ4 861 aaKnown RBP17.59■□□□□ 0.41
DNMT1-221ENST00000589538 CYP4A22Q5TCH4 519 aa17.59■□□□□ 0.41
DNMT1-221ENST00000589538 ANKRD40Q6AI12 368 aa17.59■□□□□ 0.41
DNMT1-221ENST00000589538 SCARA3Q6AZY7 606 aa17.59■□□□□ 0.41
DNMT1-221ENST00000589538 SV2AQ7L0J3 742 aa17.59■□□□□ 0.41
DNMT1-221ENST00000589538 ITIH5Q86UX2 942 aa17.59■□□□□ 0.41
DNMT1-221ENST00000589538 ZC3H3Q8IXZ2 948 aaKnown RBP17.59■□□□□ 0.41
DNMT1-221ENST00000589538 UBALD2Q8IYN6 164 aa17.59■□□□□ 0.41
DNMT1-221ENST00000589538 CEP63Q96MT8 703 aa17.59■□□□□ 0.41
DNMT1-221ENST00000589538 MYADMQ96S97 322 aa17.59■□□□□ 0.41
DNMT1-221ENST00000589538 CORO1BQ9BR76 489 aa17.59■□□□□ 0.41
DNMT1-221ENST00000589538 IMPG2Q9BZV3 1241 aa17.59■□□□□ 0.41
DNMT1-221ENST00000589538 SNX25Q9H3E2 840 aa17.59■□□□□ 0.41
DNMT1-221ENST00000589538 EPHX3Q9H6B9 360 aa17.59■□□□□ 0.41
DNMT1-221ENST00000589538 ABCB6Q9NP58 842 aa17.59■□□□□ 0.41
DNMT1-221ENST00000589538 CDH9Q9ULB4 789 aa17.59■□□□□ 0.41
DNMT1-221ENST00000589538 CDH7Q9ULB5 785 aa17.59■□□□□ 0.41
DNMT1-221ENST00000589538 SORCS3Q9UPU3 1222 aa17.59■□□□□ 0.41
DNMT1-221ENST00000589538 MRPS23Q9Y3D9 190 aaKnown RBP17.59■□□□□ 0.41
DNMT1-221ENST00000589538 CLSTN1O94985 981 aa17.58■□□□□ 0.4
DNMT1-221ENST00000589538 VNN2O95498 520 aa17.58■□□□□ 0.4
DNMT1-221ENST00000589538 FGF19O95750 216 aa17.58■□□□□ 0.4
DNMT1-221ENST00000589538 LAMP2P13473 410 aa17.58■□□□□ 0.4
DNMT1-221ENST00000589538 NTHL1P78549 312 aa17.58■□□□□ 0.4
DNMT1-221ENST00000589538 MTMR3Q13615 1198 aa17.58■□□□□ 0.4
DNMT1-221ENST00000589538 MGAT5BQ3V5L5 792 aa17.58■□□□□ 0.4
DNMT1-221ENST00000589538 ISM2Q6H9L7 571 aa17.58■□□□□ 0.4
DNMT1-221ENST00000589538 PDZD4Q76G19 769 aaPredicted RBP17.58■□□□□ 0.4
DNMT1-221ENST00000589538 CCDC150Q8NCX0 1101 aa17.58■□□□□ 0.4
DNMT1-221ENST00000589538 KBTBD7Q8WVZ9 684 aa17.58■□□□□ 0.4
DNMT1-221ENST00000589538 EDAQ92838 391 aa17.58■□□□□ 0.4
DNMT1-221ENST00000589538 FUBP3Q96I24 572 aaKnown RBP eCLIP17.58■□□□□ 0.4
DNMT1-221ENST00000589538 METTL14Q9HCE5 456 aaKnown RBP17.58■□□□□ 0.4
DNMT1-221ENST00000589538 TMEM8AQ9HCN3 771 aa17.58■□□□□ 0.4
DNMT1-221ENST00000589538 ASAH2Q9NR71 780 aa17.58■□□□□ 0.4
DNMT1-221ENST00000589538 HCFC1R1Q9NWW0 138 aa17.58■□□□□ 0.4
DNMT1-221ENST00000589538 GDE1Q9NZC3 331 aa17.58■□□□□ 0.4
DNMT1-221ENST00000589538 NXF1Q9UBU9 619 aaKnown RBP17.58■□□□□ 0.4
DNMT1-221ENST00000589538 SLC27A5Q9Y2P5 690 aa17.58■□□□□ 0.4
DNMT1-221ENST00000589538 DOCK8Q8NF50 2099 aa17.57■□□□□ 0.4
DNMT1-221ENST00000589538 BIN1O00499 593 aa17.57■□□□□ 0.4
DNMT1-221ENST00000589538 GPR37L1O60883 481 aa17.57■□□□□ 0.4
DNMT1-221ENST00000589538 N4BP1O75113 896 aaKnown RBP17.57■□□□□ 0.4
DNMT1-221ENST00000589538 VNN1O95497 513 aa17.57■□□□□ 0.4
DNMT1-221ENST00000589538 HAPLN1P10915 354 aaPredicted RBP17.57■□□□□ 0.4
DNMT1-221ENST00000589538 GNL1P36915 607 aaPredicted RBP17.57■□□□□ 0.4
DNMT1-221ENST00000589538 PIK3CAP42336 1068 aa17.57■□□□□ 0.4
DNMT1-221ENST00000589538 EPHA5P54756 1037 aa17.57■□□□□ 0.4
DNMT1-221ENST00000589538 ZXDAP98168 799 aa17.57■□□□□ 0.4
DNMT1-221ENST00000589538 CAMK4Q16566 473 aa17.57■□□□□ 0.4
DNMT1-221ENST00000589538 C1orf220Q5T0J3 134 aa17.57■□□□□ 0.4
DNMT1-221ENST00000589538 C4orf50Q6ZRC1 276 aa17.57■□□□□ 0.4
DNMT1-221ENST00000589538 MTSS1LQ765P7 747 aa17.57■□□□□ 0.4
DNMT1-221ENST00000589538 LRRTM3Q86VH5 581 aa17.57■□□□□ 0.4
DNMT1-221ENST00000589538 OSTM1Q86WC4 334 aa17.57■□□□□ 0.4
DNMT1-221ENST00000589538 PSMG2Q969U7 264 aa17.57■□□□□ 0.4
DNMT1-221ENST00000589538 SEPT5Q99719 369 aaPredicted RBP17.57■□□□□ 0.4
DNMT1-221ENST00000589538 SYT15Q9BQS2 421 aa17.57■□□□□ 0.4
DNMT1-221ENST00000589538 CRISPLD1Q9H336 500 aa17.57■□□□□ 0.4
DNMT1-221ENST00000589538 CLSTN2Q9H4D0 955 aa17.57■□□□□ 0.4
DNMT1-221ENST00000589538 ABI2Q9NYB9 513 aaPredicted RBP17.57■□□□□ 0.4
DNMT1-221ENST00000589538 CEP72Q9P209 647 aa17.57■□□□□ 0.4
DNMT1-221ENST00000589538 DOCK6Q96HP0 2047 aa17.57■□□□□ 0.4
DNMT1-221ENST00000589538 NOTCH4Q99466 2003 aa17.56■□□□□ 0.4
DNMT1-221ENST00000589538 PPP1R3GB7ZBB8 358 aa17.56■□□□□ 0.4
DNMT1-221ENST00000589538 HLA-DRAP01903 254 aa17.56■□□□□ 0.4
DNMT1-221ENST00000589538 TRIM49P0CI25 452 aa17.56■□□□□ 0.4
DNMT1-221ENST00000589538 TRIM49CP0CI26 452 aa17.56■□□□□ 0.4
DNMT1-221ENST00000589538 CD44P16070 742 aaKnown RBP17.56■□□□□ 0.4
DNMT1-221ENST00000589538 ACAT1P24752 427 aaKnown RBP17.56■□□□□ 0.4
DNMT1-221ENST00000589538 PMS1P54277 932 aaKnown RBP17.56■□□□□ 0.4
DNMT1-221ENST00000589538 RPL10AP62906 217 aaKnown RBP17.56■□□□□ 0.4
DNMT1-221ENST00000589538 PAK1Q13153 545 aa17.56■□□□□ 0.4
DNMT1-221ENST00000589538 TDGQ13569 410 aa17.56■□□□□ 0.4
DNMT1-221ENST00000589538 CFAP221Q4G0U5 840 aa17.56■□□□□ 0.4
DNMT1-221ENST00000589538 TMEM31Q5JXX7 168 aa17.56■□□□□ 0.4
DNMT1-221ENST00000589538 KRT39Q6A163 491 aa17.56■□□□□ 0.4
DNMT1-221ENST00000589538 KLHL10Q6JEL2 608 aa17.56■□□□□ 0.4
DNMT1-221ENST00000589538 FAM171BQ6P995 826 aa17.56■□□□□ 0.4
DNMT1-221ENST00000589538 FILIP1Q7Z7B0 1213 aa17.56■□□□□ 0.4
DNMT1-221ENST00000589538 SPATA2LQ8IUW3 424 aaPredicted RBP17.56■□□□□ 0.4
DNMT1-221ENST00000589538 OR6B3Q8NGW1 331 aa17.56■□□□□ 0.4
DNMT1-221ENST00000589538 ITFG1Q8TB96 612 aa17.56■□□□□ 0.4
DNMT1-221ENST00000589538 NELFBQ8WX92 580 aa17.56■□□□□ 0.4
DNMT1-221ENST00000589538 FGF13Q92913 245 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms