RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 KREMEN1Q96MU8 473 aa16.52■□□□□ 0.24
RPRD1A-208ENST00000589050 TMEM209Q96SK2 561 aa16.52■□□□□ 0.24
RPRD1A-208ENST00000589050 CDX2Q99626 313 aaPredicted RBP16.52■□□□□ 0.24
RPRD1A-208ENST00000589050 ACBD6Q9BR61 282 aa16.52■□□□□ 0.24
RPRD1A-208ENST00000589050 NSUN3Q9H649 340 aaKnown RBP16.52■□□□□ 0.24
RPRD1A-208ENST00000589050 TLE6Q9H808 572 aa16.52■□□□□ 0.24
RPRD1A-208ENST00000589050 HMGXB4Q9UGU5 601 aa16.52■□□□□ 0.24
RPRD1A-208ENST00000589050 DNAJC12Q9UKB3 198 aa16.52■□□□□ 0.24
RPRD1A-208ENST00000589050 BARX2Q9UMQ3 279 aaPredicted RBP16.52■□□□□ 0.24
RPRD1A-208ENST00000589050 STXBP5LQ9Y2K9 1186 aa16.52■□□□□ 0.24
RPRD1A-208ENST00000589050 NME7Q9Y5B8 376 aa16.52■□□□□ 0.24
RPRD1A-208ENST00000589050 CHD7Q9P2D1 2997 aa16.51■□□□□ 0.23
RPRD1A-208ENST00000589050 A0A1W2PQC6 194 aa16.51■□□□□ 0.23
RPRD1A-208ENST00000589050 PER2O15055 1255 aa16.51■□□□□ 0.23
RPRD1A-208ENST00000589050 CILPO75339 1184 aa16.51■□□□□ 0.23
RPRD1A-208ENST00000589050 CPB1P15086 417 aa16.51■□□□□ 0.23
RPRD1A-208ENST00000589050 UCHL3P15374 230 aa16.51■□□□□ 0.23
RPRD1A-208ENST00000589050 POU3F3P20264 500 aaPredicted RBP16.51■□□□□ 0.23
RPRD1A-208ENST00000589050 NRIP1P48552 1158 aa16.51■□□□□ 0.23
RPRD1A-208ENST00000589050 PSMC1P62191 440 aaKnown RBP16.51■□□□□ 0.23
RPRD1A-208ENST00000589050 TSPY1Q01534 308 aa16.51■□□□□ 0.23
RPRD1A-208ENST00000589050 ORC1Q13415 861 aa16.51■□□□□ 0.23
RPRD1A-208ENST00000589050 ARHGAP44Q17R89 818 aa16.51■□□□□ 0.23
RPRD1A-208ENST00000589050 IQCEQ6IPM2 695 aa16.51■□□□□ 0.23
RPRD1A-208ENST00000589050 SLC8B1Q6J4K2 584 aa16.51■□□□□ 0.23
RPRD1A-208ENST00000589050 SARM1Q6SZW1 724 aa16.51■□□□□ 0.23
RPRD1A-208ENST00000589050 UNC93AQ86WB7 457 aa16.51■□□□□ 0.23
RPRD1A-208ENST00000589050 UBR7Q8N806 425 aa16.51■□□□□ 0.23
RPRD1A-208ENST00000589050 GUCD1Q96NT3 240 aa16.51■□□□□ 0.23
RPRD1A-208ENST00000589050 SYT15Q9BQS2 421 aa16.51■□□□□ 0.23
RPRD1A-208ENST00000589050 ZCWPW1Q9H0M4 648 aa16.51■□□□□ 0.23
RPRD1A-208ENST00000589050 GANQ9H2C0 597 aa16.51■□□□□ 0.23
RPRD1A-208ENST00000589050 DPEP3Q9H4B8 488 aa16.51■□□□□ 0.23
RPRD1A-208ENST00000589050 FAM124BQ9H5Z6 455 aaPredicted RBP16.51■□□□□ 0.23
RPRD1A-208ENST00000589050 AJAP1Q9UKB5 411 aaPredicted RBP16.51■□□□□ 0.23
RPRD1A-208ENST00000589050 CDH9Q9ULB4 789 aa16.51■□□□□ 0.23
RPRD1A-208ENST00000589050 FHOD1Q9Y613 1164 aa16.51■□□□□ 0.23
RPRD1A-208ENST00000589050 TSC2P49815 1807 aa16.51■□□□□ 0.23
RPRD1A-208ENST00000589050 EPHB6O15197 1021 aa16.5■□□□□ 0.23
RPRD1A-208ENST00000589050 AP5Z1O43299 807 aa16.5■□□□□ 0.23
RPRD1A-208ENST00000589050 CLASP2O75122 1294 aaKnown RBP16.5■□□□□ 0.23
RPRD1A-208ENST00000589050 ATP2C2O75185 946 aa16.5■□□□□ 0.23
RPRD1A-208ENST00000589050 NOL4O94818 638 aa16.5■□□□□ 0.23
RPRD1A-208ENST00000589050 ACO1P21399 889 aaKnown RBP16.5■□□□□ 0.23
RPRD1A-208ENST00000589050 RFX1P22670 979 aa16.5■□□□□ 0.23
RPRD1A-208ENST00000589050 ROR1Q01973 937 aa16.5■□□□□ 0.23
RPRD1A-208ENST00000589050 RAPGEF1Q13905 1077 aa16.5■□□□□ 0.23
RPRD1A-208ENST00000589050 RAB33AQ14088 237 aa16.5■□□□□ 0.23
RPRD1A-208ENST00000589050 SLC39A12Q504Y0 691 aa16.5■□□□□ 0.23
RPRD1A-208ENST00000589050 ZNF394Q53GI3 561 aa16.5■□□□□ 0.23
RPRD1A-208ENST00000589050 TCEAL5Q5H9L2 206 aa16.5■□□□□ 0.23
RPRD1A-208ENST00000589050 INTS6LQ5JSJ4 861 aaKnown RBP16.5■□□□□ 0.23
RPRD1A-208ENST00000589050 PALB2Q86YC2 1186 aa16.5■□□□□ 0.23
RPRD1A-208ENST00000589050 DCP1BQ8IZD4 617 aaKnown RBP16.5■□□□□ 0.23
RPRD1A-208ENST00000589050 MICALL1Q8N3F8 863 aa16.5■□□□□ 0.23
RPRD1A-208ENST00000589050 JAKMIP2Q96AA8 810 aa16.5■□□□□ 0.23
RPRD1A-208ENST00000589050 TNIP3Q96KP6 325 aa16.5■□□□□ 0.23
RPRD1A-208ENST00000589050 TWNKQ96RR1 684 aa16.5■□□□□ 0.23
RPRD1A-208ENST00000589050 NT5C1AQ9BXI3 368 aa16.5■□□□□ 0.23
RPRD1A-208ENST00000589050 TRIM5Q9C035 493 aa16.5■□□□□ 0.23
RPRD1A-208ENST00000589050 DNAI2Q9GZS0 605 aa16.5■□□□□ 0.23
RPRD1A-208ENST00000589050 MTMR10Q9NXD2 777 aa16.5■□□□□ 0.23
RPRD1A-208ENST00000589050 PCDHB4Q9Y5E5 795 aa16.5■□□□□ 0.23
RPRD1A-208ENST00000589050 VWA8A3KMH1 1905 aa16.49■□□□□ 0.23
RPRD1A-208ENST00000589050 WDR27A2RRH5 827 aa16.49■□□□□ 0.23
RPRD1A-208ENST00000589050 KRT5P13647 590 aa16.49■□□□□ 0.23
RPRD1A-208ENST00000589050 FOSL2P15408 326 aa16.49■□□□□ 0.23
RPRD1A-208ENST00000589050 PTPN1P18031 435 aaKnown RBP16.49■□□□□ 0.23
RPRD1A-208ENST00000589050 TRIM21P19474 475 aaKnown RBP16.49■□□□□ 0.23
RPRD1A-208ENST00000589050 PBX1P40424 430 aa16.49■□□□□ 0.23
RPRD1A-208ENST00000589050 POLR2FP61218 127 aaKnown RBP16.49■□□□□ 0.23
RPRD1A-208ENST00000589050 DUSP6Q16828 381 aa16.49■□□□□ 0.23
RPRD1A-208ENST00000589050 TMEM270Q6UE05 265 aa16.49■□□□□ 0.23
RPRD1A-208ENST00000589050 ACOT1Q86TX2 421 aa16.49■□□□□ 0.23
RPRD1A-208ENST00000589050 LRRTM3Q86VH5 581 aa16.49■□□□□ 0.23
RPRD1A-208ENST00000589050 PPFIBP1Q86W92 1011 aa16.49■□□□□ 0.23
RPRD1A-208ENST00000589050 B3GALNT2Q8NCR0 500 aa16.49■□□□□ 0.23
RPRD1A-208ENST00000589050 WHAMMQ8TF30 809 aa16.49■□□□□ 0.23
RPRD1A-208ENST00000589050 CDCA3Q99618 268 aaPredicted RBP16.49■□□□□ 0.23
RPRD1A-208ENST00000589050 NAA15Q9BXJ9 866 aaKnown RBP16.49■□□□□ 0.23
RPRD1A-208ENST00000589050 ELOVL4Q9GZR5 314 aa16.49■□□□□ 0.23
RPRD1A-208ENST00000589050 IGFLR1Q9H665 355 aa16.49■□□□□ 0.23
RPRD1A-208ENST00000589050 CRTAC1Q9NQ79 661 aa16.49■□□□□ 0.23
RPRD1A-208ENST00000589050 GTF3C4Q9UKN8 822 aa16.49■□□□□ 0.23
RPRD1A-208ENST00000589050 DAAM1Q9Y4D1 1078 aa16.49■□□□□ 0.23
RPRD1A-208ENST00000589050 MYBPHLA2RUH7 354 aa16.48■□□□□ 0.23
RPRD1A-208ENST00000589050 TGM5O43548 720 aa16.48■□□□□ 0.23
RPRD1A-208ENST00000589050 GLUD1P00367 558 aa16.48■□□□□ 0.23
RPRD1A-208ENST00000589050 GTF2F1P35269 517 aaKnown RBP eCLIP16.48■□□□□ 0.23
RPRD1A-208ENST00000589050 USP8P40818 1118 aa16.48■□□□□ 0.23
RPRD1A-208ENST00000589050 CLCN4P51793 760 aa16.48■□□□□ 0.23
RPRD1A-208ENST00000589050 CDR1P51861 262 aa16.48■□□□□ 0.23
RPRD1A-208ENST00000589050 RAD23BP54727 409 aa16.48■□□□□ 0.23
RPRD1A-208ENST00000589050 HYAL1Q12794 435 aa16.48■□□□□ 0.23
RPRD1A-208ENST00000589050 GPR17Q13304 367 aa16.48■□□□□ 0.23
RPRD1A-208ENST00000589050 DRAP1Q14919 205 aaPredicted RBP16.48■□□□□ 0.23
RPRD1A-208ENST00000589050 CCDC142Q17RM4 750 aa16.48■□□□□ 0.23
RPRD1A-208ENST00000589050 MDH1BQ5I0G3 518 aa16.48■□□□□ 0.23
RPRD1A-208ENST00000589050 RNF19BQ6ZMZ0 732 aa16.48■□□□□ 0.23
RPRD1A-208ENST00000589050 CRYBG2Q8N1P7 616 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms