RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 ITGB2P05107 769 aa8.85□□□□□ -0.99
ATG4D-210ENST00000588972 ASNSP08243 561 aa8.85□□□□□ -0.99
ATG4D-210ENST00000588972 CD8BP10966 210 aa8.85□□□□□ -0.99
ATG4D-210ENST00000588972 GSPT1P15170 499 aaKnown RBP8.85□□□□□ -0.99
ATG4D-210ENST00000588972 FAHP16930 419 aa8.85□□□□□ -0.99
ATG4D-210ENST00000588972 CCND3P30281 292 aaPredicted RBP8.85□□□□□ -0.99
ATG4D-210ENST00000588972 SLC16A1P53985 500 aa8.85□□□□□ -0.99
ATG4D-210ENST00000588972 SLC6A3Q01959 620 aa8.85□□□□□ -0.99
ATG4D-210ENST00000588972 ALDH6A1Q02252 535 aaKnown RBP8.85□□□□□ -0.99
ATG4D-210ENST00000588972 ADCY2Q08462 1091 aa8.85□□□□□ -0.99
ATG4D-210ENST00000588972 DOC2BQ14184 412 aa8.85□□□□□ -0.99
ATG4D-210ENST00000588972 FAM83BQ5T0W9 1011 aa8.85□□□□□ -0.99
ATG4D-210ENST00000588972 PRAMEF9Q5VWM5 478 aa8.85□□□□□ -0.99
ATG4D-210ENST00000588972 TMED8Q6PL24 325 aaPredicted RBP8.85□□□□□ -0.99
ATG4D-210ENST00000588972 CCDC129Q6ZRS4 1044 aa8.85□□□□□ -0.99
ATG4D-210ENST00000588972 CCDC149Q6ZUS6 474 aa8.85□□□□□ -0.99
ATG4D-210ENST00000588972 CENPQQ7L2Z9 268 aaPredicted RBP8.85□□□□□ -0.99
ATG4D-210ENST00000588972 APBB1IPQ7Z5R6 666 aaPredicted RBP8.85□□□□□ -0.99
ATG4D-210ENST00000588972 DENND1CQ8IV53 801 aa8.85□□□□□ -0.99
ATG4D-210ENST00000588972 SLC41A1Q8IVJ1 513 aa8.85□□□□□ -0.99
ATG4D-210ENST00000588972 OXR1Q8N573 874 aa8.85□□□□□ -0.99
ATG4D-210ENST00000588972 CAMKK1Q8N5S9 505 aa8.85□□□□□ -0.99
ATG4D-210ENST00000588972 USP6NLQ92738 828 aa8.85□□□□□ -0.99
ATG4D-210ENST00000588972 RILPL2Q969X0 211 aa8.85□□□□□ -0.99
ATG4D-210ENST00000588972 FOXB1Q99853 325 aa8.85□□□□□ -0.99
ATG4D-210ENST00000588972 CRNKL1Q9BZJ0 848 aaKnown RBP8.85□□□□□ -0.99
ATG4D-210ENST00000588972 TMEM60Q9H2L4 133 aa8.85□□□□□ -0.99
ATG4D-210ENST00000588972 DNAJC18Q9H819 358 aa8.85□□□□□ -0.99
ATG4D-210ENST00000588972 SLC4A4Q9Y6R1 1079 aa8.85□□□□□ -0.99
ATG4D-210ENST00000588972 CYP2D7A0A087X1C5 515 aa8.84□□□□□ -0.99
ATG4D-210ENST00000588972 SMIM22K7EJ46 135 aa8.84□□□□□ -0.99
ATG4D-210ENST00000588972 GPAA1O43292 621 aa8.84□□□□□ -0.99
ATG4D-210ENST00000588972 PSPNO60542 156 aa8.84□□□□□ -0.99
ATG4D-210ENST00000588972 UBXN7O94888 489 aa8.84□□□□□ -0.99
ATG4D-210ENST00000588972 TGFB1P01137 390 aa8.84□□□□□ -0.99
ATG4D-210ENST00000588972 ZFYP08048 801 aaPredicted RBP8.84□□□□□ -0.99
ATG4D-210ENST00000588972 PFKMP08237 780 aa8.84□□□□□ -0.99
ATG4D-210ENST00000588972 CYP2D6P10635 497 aa8.84□□□□□ -0.99
ATG4D-210ENST00000588972 FUT4P22083 530 aa8.84□□□□□ -0.99
ATG4D-210ENST00000588972 MC4RP32245 332 aa8.84□□□□□ -0.99
ATG4D-210ENST00000588972 PLCD1P51178 756 aa8.84□□□□□ -0.99
ATG4D-210ENST00000588972 CDK17Q00537 523 aa8.84□□□□□ -0.99
ATG4D-210ENST00000588972 RRP1BQ14684 758 aaKnown RBP8.84□□□□□ -0.99
ATG4D-210ENST00000588972 NR0B2Q15466 257 aa8.84□□□□□ -0.99
ATG4D-210ENST00000588972 CCL14Q16627 93 aa8.84□□□□□ -0.99
ATG4D-210ENST00000588972 SHROOM1Q2M3G4 852 aaPredicted RBP8.84□□□□□ -0.99
ATG4D-210ENST00000588972 PLA2G4EQ3MJ16 856 aa8.84□□□□□ -0.99
ATG4D-210ENST00000588972 ZMYM1Q5SVZ6 1142 aa8.84□□□□□ -0.99
ATG4D-210ENST00000588972 TTC22Q5TAA0 569 aa8.84□□□□□ -0.99
ATG4D-210ENST00000588972 SLFN12LQ6IEE8 588 aa8.84□□□□□ -0.99
ATG4D-210ENST00000588972 ERAP2Q6P179 960 aa8.84□□□□□ -0.99
ATG4D-210ENST00000588972 GPR142Q7Z601 462 aa8.84□□□□□ -0.99
ATG4D-210ENST00000588972 SPRED2Q7Z698 418 aa8.84□□□□□ -0.99
ATG4D-210ENST00000588972 PLEKHH3Q7Z736 793 aa8.84□□□□□ -0.99
ATG4D-210ENST00000588972 NLRX1Q86UT6 975 aa8.84□□□□□ -0.99
ATG4D-210ENST00000588972 MAFAQ8NHW3 353 aaPredicted RBP8.84□□□□□ -0.99
ATG4D-210ENST00000588972 FAM227BQ96M60 508 aa8.84□□□□□ -0.99
ATG4D-210ENST00000588972 P2RX7Q99572 595 aaKnown RBP8.84□□□□□ -0.99
ATG4D-210ENST00000588972 PAGR1Q9BTK6 254 aa8.84□□□□□ -0.99
ATG4D-210ENST00000588972 PORCNQ9H237 461 aa8.84□□□□□ -0.99
ATG4D-210ENST00000588972 DCP1AQ9NPI6 582 aaPredicted RBP8.84□□□□□ -0.99
ATG4D-210ENST00000588972 PI4KBQ9UBF8 816 aa8.84□□□□□ -0.99
ATG4D-210ENST00000588972 A0A0D9SFI3 127 aa8.83□□□□□ -1
ATG4D-210ENST00000588972 C19orf81C9J6K1 198 aa8.83□□□□□ -1
ATG4D-210ENST00000588972 FAM227AF5H4B4 570 aa8.83□□□□□ -1
ATG4D-210ENST00000588972 B3GALT2O43825 422 aa8.83□□□□□ -1
ATG4D-210ENST00000588972 PEX10O60683 326 aa8.83□□□□□ -1
ATG4D-210ENST00000588972 DTNBO60941 627 aa8.83□□□□□ -1
ATG4D-210ENST00000588972 HLA-DOAP06340 250 aa8.83□□□□□ -1
ATG4D-210ENST00000588972 DBHP09172 617 aa8.83□□□□□ -1
ATG4D-210ENST00000588972 PAX3P23760 479 aa8.83□□□□□ -1
ATG4D-210ENST00000588972 EDNRBP24530 442 aa8.83□□□□□ -1
ATG4D-210ENST00000588972 ALDH5A1P51649 535 aaPredicted RBP8.83□□□□□ -1
ATG4D-210ENST00000588972 AK2P54819 239 aa8.83□□□□□ -1
ATG4D-210ENST00000588972 ROM1Q03395 351 aa8.83□□□□□ -1
ATG4D-210ENST00000588972 DBPQ10586 325 aaPredicted RBP8.83□□□□□ -1
ATG4D-210ENST00000588972 ANO4Q32M45 955 aa8.83□□□□□ -1
ATG4D-210ENST00000588972 PGS1Q32NB8 556 aa8.83□□□□□ -1
ATG4D-210ENST00000588972 NKAPLQ5M9Q1 402 aa8.83□□□□□ -1
ATG4D-210ENST00000588972 MFSD14CQ5VZR4 134 aa8.83□□□□□ -1
ATG4D-210ENST00000588972 SRLQ86TD4 932 aa8.83□□□□□ -1
ATG4D-210ENST00000588972 TNIP3Q96KP6 325 aa8.83□□□□□ -1
ATG4D-210ENST00000588972 CDX2Q99626 313 aaPredicted RBP8.83□□□□□ -1
ATG4D-210ENST00000588972 ACE2Q9BYF1 805 aaPredicted RBP8.83□□□□□ -1
ATG4D-210ENST00000588972 SENP6Q9GZR1 1112 aaPredicted RBP8.83□□□□□ -1
ATG4D-210ENST00000588972 DHX36Q9H2U1 1008 aaKnown RBP8.83□□□□□ -1
ATG4D-210ENST00000588972 PPCSQ9HAB8 311 aa8.83□□□□□ -1
ATG4D-210ENST00000588972 EPB41L4AQ9HCS5 686 aaPredicted RBP8.83□□□□□ -1
ATG4D-210ENST00000588972 NLRC4Q9NPP4 1024 aa8.83□□□□□ -1
ATG4D-210ENST00000588972 PLCB1Q9NQ66 1216 aa8.83□□□□□ -1
ATG4D-210ENST00000588972 MCM9Q9NXL9 1143 aa8.83□□□□□ -1
ATG4D-210ENST00000588972 RBPJLQ9UBG7 517 aa8.83□□□□□ -1
ATG4D-210ENST00000588972 PRSS50Q9UI38 385 aa8.83□□□□□ -1
ATG4D-210ENST00000588972 LIMCH1Q9UPQ0 1083 aa8.83□□□□□ -1
ATG4D-210ENST00000588972 NCOR1O75376 2440 aa8.82□□□□□ -1
ATG4D-210ENST00000588972 CCDC189A1A4V9 331 aa8.82□□□□□ -1
ATG4D-210ENST00000588972 DNM1LO00429 736 aa8.82□□□□□ -1
ATG4D-210ENST00000588972 GDF11O95390 407 aa8.82□□□□□ -1
ATG4D-210ENST00000588972 MPIG6BO95866 241 aa8.82□□□□□ -1
ATG4D-210ENST00000588972 CELA3BP08861 270 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms