RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 KRT9P35527 623 aa18.08■□□□□ 0.48
SCAMP4-211ENST00000588907 USP8P40818 1118 aa18.08■□□□□ 0.48
SCAMP4-211ENST00000588907 ZNF132P52740 706 aa18.08■□□□□ 0.48
SCAMP4-211ENST00000588907 PTK2Q05397 1052 aa18.08■□□□□ 0.48
SCAMP4-211ENST00000588907 SMC1AQ14683 1233 aaKnown RBP18.08■□□□□ 0.48
SCAMP4-211ENST00000588907 ARID5BQ14865 1188 aa18.08■□□□□ 0.48
SCAMP4-211ENST00000588907 PSMD5Q16401 504 aa18.08■□□□□ 0.48
SCAMP4-211ENST00000588907 CTXN3Q4LDR2 81 aa18.08■□□□□ 0.48
SCAMP4-211ENST00000588907 RTP2Q5QGT7 225 aa18.08■□□□□ 0.48
SCAMP4-211ENST00000588907 SFMBT2Q5VUG0 894 aa18.08■□□□□ 0.48
SCAMP4-211ENST00000588907 DCP1BQ8IZD4 617 aaKnown RBP18.08■□□□□ 0.48
SCAMP4-211ENST00000588907 CRYBG2Q8N1P7 616 aa18.08■□□□□ 0.48
SCAMP4-211ENST00000588907 RBBP8NLQ8NC74 664 aaPredicted RBP18.08■□□□□ 0.48
SCAMP4-211ENST00000588907 OR8K1Q8NGG5 319 aa18.08■□□□□ 0.48
SCAMP4-211ENST00000588907 SPPL3Q8TCT6 385 aa18.08■□□□□ 0.48
SCAMP4-211ENST00000588907 RIN2Q8WYP3 895 aaPredicted RBP18.08■□□□□ 0.48
SCAMP4-211ENST00000588907 ELMO3Q96BJ8 720 aa18.08■□□□□ 0.48
SCAMP4-211ENST00000588907 DNAJC7Q99615 494 aa18.08■□□□□ 0.48
SCAMP4-211ENST00000588907 VN1R3Q9BXE9 311 aa18.08■□□□□ 0.48
SCAMP4-211ENST00000588907 GPR88Q9GZN0 384 aa18.08■□□□□ 0.48
SCAMP4-211ENST00000588907 AIPL1Q9NZN9 384 aa18.08■□□□□ 0.48
SCAMP4-211ENST00000588907 FNIP2Q9P278 1114 aa18.08■□□□□ 0.48
SCAMP4-211ENST00000588907 MTRRQ9UBK8 725 aa18.08■□□□□ 0.48
SCAMP4-211ENST00000588907 MTUS1Q9ULD2 1270 aa18.08■□□□□ 0.48
SCAMP4-211ENST00000588907 TIMM13Q9Y5L4 95 aaPredicted RBP18.08■□□□□ 0.48
SCAMP4-211ENST00000588907 IRAK3Q9Y616 596 aa18.08■□□□□ 0.48
SCAMP4-211ENST00000588907 LRRC53A6NM62 1247 aa18.07■□□□□ 0.48
SCAMP4-211ENST00000588907 FOXN3O00409 490 aaPredicted RBP18.07■□□□□ 0.48
SCAMP4-211ENST00000588907 MED7O43513 233 aa18.07■□□□□ 0.48
SCAMP4-211ENST00000588907 ARHGEF15O94989 841 aa18.07■□□□□ 0.48
SCAMP4-211ENST00000588907 FXR1P51114 621 aaKnown RBP eCLIP18.07■□□□□ 0.48
SCAMP4-211ENST00000588907 PDE6CP51160 858 aa18.07■□□□□ 0.48
SCAMP4-211ENST00000588907 GPM6BQ13491 265 aa18.07■□□□□ 0.48
SCAMP4-211ENST00000588907 ASIC2Q16515 512 aa18.07■□□□□ 0.48
SCAMP4-211ENST00000588907 NFE2Q16621 373 aaPredicted RBP18.07■□□□□ 0.48
SCAMP4-211ENST00000588907 PTPROQ16827 1216 aa18.07■□□□□ 0.48
SCAMP4-211ENST00000588907 KIAA0319Q5VV43 1072 aa18.07■□□□□ 0.48
SCAMP4-211ENST00000588907 ZNF677Q86XU0 584 aa18.07■□□□□ 0.48
SCAMP4-211ENST00000588907 B3GALNT2Q8NCR0 500 aa18.07■□□□□ 0.48
SCAMP4-211ENST00000588907 CPLX3Q8WVH0 158 aa18.07■□□□□ 0.48
SCAMP4-211ENST00000588907 POF1BQ8WVV4 589 aa18.07■□□□□ 0.48
SCAMP4-211ENST00000588907 TCF25Q9BQ70 676 aa18.07■□□□□ 0.48
SCAMP4-211ENST00000588907 SYT15Q9BQS2 421 aa18.07■□□□□ 0.48
SCAMP4-211ENST00000588907 ENTPD7Q9NQZ7 604 aa18.07■□□□□ 0.48
SCAMP4-211ENST00000588907 AJAP1Q9UKB5 411 aaPredicted RBP18.07■□□□□ 0.48
SCAMP4-211ENST00000588907 PLXNA4Q9HCM2 1894 aa18.07■□□□□ 0.48
SCAMP4-211ENST00000588907 ATP8B3O60423 1300 aa18.06■□□□□ 0.48
SCAMP4-211ENST00000588907 C1RP00736 705 aa18.06■□□□□ 0.48
SCAMP4-211ENST00000588907 HNRNPH3P31942 346 aaKnown RBP18.06■□□□□ 0.48
SCAMP4-211ENST00000588907 RAD23BP54727 409 aa18.06■□□□□ 0.48
SCAMP4-211ENST00000588907 CCDC173Q0VFZ6 552 aa18.06■□□□□ 0.48
SCAMP4-211ENST00000588907 PTPN14Q15678 1187 aa18.06■□□□□ 0.48
SCAMP4-211ENST00000588907 MEA1Q16626 185 aa18.06■□□□□ 0.48
SCAMP4-211ENST00000588907 INTS6LQ5JSJ4 861 aaKnown RBP18.06■□□□□ 0.48
SCAMP4-211ENST00000588907 SLC8B1Q6J4K2 584 aa18.06■□□□□ 0.48
SCAMP4-211ENST00000588907 TMC7Q7Z402 723 aa18.06■□□□□ 0.48
SCAMP4-211ENST00000588907 OSTM1Q86WC4 334 aa18.06■□□□□ 0.48
SCAMP4-211ENST00000588907 LNX1Q8TBB1 728 aaPredicted RBP18.06■□□□□ 0.48
SCAMP4-211ENST00000588907 WHAMMQ8TF30 809 aa18.06■□□□□ 0.48
SCAMP4-211ENST00000588907 C2orf15Q8WU43 125 aaKnown RBP18.06■□□□□ 0.48
SCAMP4-211ENST00000588907 ARNTL2Q8WYA1 636 aa18.06■□□□□ 0.48
SCAMP4-211ENST00000588907 PANX2Q96RD6 677 aa18.06■□□□□ 0.48
SCAMP4-211ENST00000588907 EMILIN2Q9BXX0 1053 aa18.06■□□□□ 0.48
SCAMP4-211ENST00000588907 ABHD10Q9NUJ1 306 aa18.06■□□□□ 0.48
SCAMP4-211ENST00000588907 MAFFQ9ULX9 164 aa18.06■□□□□ 0.48
SCAMP4-211ENST00000588907 CYP26A1O43174 497 aa18.05■□□□□ 0.48
SCAMP4-211ENST00000588907 TBC1D4O60343 1298 aa18.05■□□□□ 0.48
SCAMP4-211ENST00000588907 GFPT2O94808 682 aa18.05■□□□□ 0.48
SCAMP4-211ENST00000588907 VDRP11473 427 aa18.05■□□□□ 0.48
SCAMP4-211ENST00000588907 PTPN1P18031 435 aaKnown RBP18.05■□□□□ 0.48
SCAMP4-211ENST00000588907 ANXA13P27216 316 aa18.05■□□□□ 0.48
SCAMP4-211ENST00000588907 GNA15P30679 374 aa18.05■□□□□ 0.48
SCAMP4-211ENST00000588907 PRKCIP41743 596 aa18.05■□□□□ 0.48
SCAMP4-211ENST00000588907 NDUFV1P49821 464 aa18.05■□□□□ 0.48
SCAMP4-211ENST00000588907 SGO2Q562F6 1265 aa18.05■□□□□ 0.48
SCAMP4-211ENST00000588907 C4orf50Q6ZRC1 276 aa18.05■□□□□ 0.48
SCAMP4-211ENST00000588907 TAS1R1Q7RTX1 841 aa18.05■□□□□ 0.48
SCAMP4-211ENST00000588907 SLC4A11Q8NBS3 891 aa18.05■□□□□ 0.48
SCAMP4-211ENST00000588907 SPC24Q8NBT2 197 aa18.05■□□□□ 0.48
SCAMP4-211ENST00000588907 PPP2R3CQ969Q6 453 aa18.05■□□□□ 0.48
SCAMP4-211ENST00000588907 PDLIM2Q96JY6 352 aa18.05■□□□□ 0.48
SCAMP4-211ENST00000588907 HEXIM2Q96MH2 286 aaKnown RBP18.05■□□□□ 0.48
SCAMP4-211ENST00000588907 ZCWPW1Q9H0M4 648 aa18.05■□□□□ 0.48
SCAMP4-211ENST00000588907 ZNF576Q9H609 170 aa18.05■□□□□ 0.48
SCAMP4-211ENST00000588907 RXFP1Q9HBX9 757 aa18.05■□□□□ 0.48
SCAMP4-211ENST00000588907 ALG13Q9NP73 1137 aaKnown RBP18.05■□□□□ 0.48
SCAMP4-211ENST00000588907 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.04■□□□□ 0.48
SCAMP4-211ENST00000588907 FSCN2O14926 492 aa18.04■□□□□ 0.48
SCAMP4-211ENST00000588907 NRDCO43847 1150 aa18.04■□□□□ 0.48
SCAMP4-211ENST00000588907 SERPING1P05155 500 aa18.04■□□□□ 0.48
SCAMP4-211ENST00000588907 ADH1AP07327 375 aa18.04■□□□□ 0.48
SCAMP4-211ENST00000588907 PDGFRBP09619 1106 aa18.04■□□□□ 0.48
SCAMP4-211ENST00000588907 LMO2P25791 158 aa18.04■□□□□ 0.48
SCAMP4-211ENST00000588907 CDK17Q00537 523 aa18.04■□□□□ 0.48
SCAMP4-211ENST00000588907 ZNF394Q53GI3 561 aa18.04■□□□□ 0.48
SCAMP4-211ENST00000588907 TPGS2Q68CL5 300 aa18.04■□□□□ 0.48
SCAMP4-211ENST00000588907 FAM171BQ6P995 826 aa18.04■□□□□ 0.48
SCAMP4-211ENST00000588907 ACOT1Q86TX2 421 aa18.04■□□□□ 0.48
SCAMP4-211ENST00000588907 VPS36Q86VN1 386 aa18.04■□□□□ 0.48
SCAMP4-211ENST00000588907 MYCBPAPQ8TBZ2 947 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms