RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.1■■□□□ 1.45
ACTN4-210ENST00000588618 ZNF571Q7Z3V5 609 aaPredicted RBP24.1■■□□□ 1.45
ACTN4-210ENST00000588618 NOP9Q86U38 636 aaKnown RBP24.1■■□□□ 1.45
ACTN4-210ENST00000588618 VPS36Q86VN1 386 aa24.1■■□□□ 1.45
ACTN4-210ENST00000588618 SLC20A1Q8WUM9 679 aa24.1■■□□□ 1.45
ACTN4-210ENST00000588618 TRIM44Q96DX7 344 aaPredicted RBP24.1■■□□□ 1.45
ACTN4-210ENST00000588618 STK39Q9UEW8 545 aa24.1■■□□□ 1.45
ACTN4-210ENST00000588618 NOCTQ9UK39 431 aaKnown RBP24.1■■□□□ 1.45
ACTN4-210ENST00000588618 STXBP5LQ9Y2K9 1186 aa24.1■■□□□ 1.45
ACTN4-210ENST00000588618 PCDHA11Q9Y5I1 949 aa24.1■■□□□ 1.45
ACTN4-210ENST00000588618 NLRC5Q86WI3 1866 aa24.1■■□□□ 1.45
ACTN4-210ENST00000588618 PAEPP09466 180 aa24.1■■□□□ 1.45
ACTN4-210ENST00000588618 CD19P15391 556 aa24.1■■□□□ 1.45
ACTN4-210ENST00000588618 LMO2P25791 158 aa24.1■■□□□ 1.45
ACTN4-210ENST00000588618 PCSK1P29120 753 aa24.1■■□□□ 1.45
ACTN4-210ENST00000588618 TKTP29401 623 aaKnown RBP24.1■■□□□ 1.45
ACTN4-210ENST00000588618 KIAA1841Q6NSI8 718 aa24.1■■□□□ 1.45
ACTN4-210ENST00000588618 TDHQ8IZJ6 230 aa24.1■■□□□ 1.45
ACTN4-210ENST00000588618 SLC4A11Q8NBS3 891 aa24.1■■□□□ 1.45
ACTN4-210ENST00000588618 HEXIM2Q96MH2 286 aaKnown RBP24.1■■□□□ 1.45
ACTN4-210ENST00000588618 GABRDO14764 452 aa24.09■■□□□ 1.45
ACTN4-210ENST00000588618 CYP11B1P15538 503 aa24.09■■□□□ 1.45
ACTN4-210ENST00000588618 CTNNB1P35222 781 aa24.09■■□□□ 1.45
ACTN4-210ENST00000588618 EIF4A3P38919 411 aaKnown RBP24.09■■□□□ 1.45
ACTN4-210ENST00000588618 USP41Q3LFD5 358 aa24.09■■□□□ 1.45
ACTN4-210ENST00000588618 TMTC1Q8IUR5 882 aa24.09■■□□□ 1.45
ACTN4-210ENST00000588618 DDX1Q92499 740 aaKnown RBP24.09■■□□□ 1.45
ACTN4-210ENST00000588618 ZSWIM1Q9BR11 485 aa24.09■■□□□ 1.45
ACTN4-210ENST00000588618 TTPALQ9BTX7 342 aa24.09■■□□□ 1.45
ACTN4-210ENST00000588618 NHEJ1Q9H9Q4 299 aaPredicted RBP24.09■■□□□ 1.45
ACTN4-210ENST00000588618 LINC01553A4QN01 128 aa24.08■■□□□ 1.45
ACTN4-210ENST00000588618 CA3P07451 260 aa24.08■■□□□ 1.45
ACTN4-210ENST00000588618 MYOGP15173 224 aa24.08■■□□□ 1.45
ACTN4-210ENST00000588618 ASTE1Q2TB18 679 aaPredicted RBP24.08■■□□□ 1.45
ACTN4-210ENST00000588618 CCDC42Q96M95 316 aa24.08■■□□□ 1.45
ACTN4-210ENST00000588618 PDCL3Q9H2J4 239 aa24.08■■□□□ 1.45
ACTN4-210ENST00000588618 DPEP3Q9H4B8 488 aa24.08■■□□□ 1.45
ACTN4-210ENST00000588618 MSRAQ9UJ68 235 aa24.08■■□□□ 1.45
ACTN4-210ENST00000588618 THAP12O43422 761 aa24.07■■□□□ 1.44
ACTN4-210ENST00000588618 FGF18O76093 207 aa24.07■■□□□ 1.44
ACTN4-210ENST00000588618 EFEMP2O95967 443 aa24.07■■□□□ 1.44
ACTN4-210ENST00000588618 CHRNB2P17787 502 aa24.07■■□□□ 1.44
ACTN4-210ENST00000588618 FGFR3P22607 806 aa24.07■■□□□ 1.44
ACTN4-210ENST00000588618 MAPK8IP2Q13387 824 aaPredicted RBP24.07■■□□□ 1.44
ACTN4-210ENST00000588618 VARS2Q5ST30 1063 aaKnown RBP24.07■■□□□ 1.44
ACTN4-210ENST00000588618 ZNF280DQ6N043 979 aa24.07■■□□□ 1.44
ACTN4-210ENST00000588618 ACOT1Q86TX2 421 aa24.07■■□□□ 1.44
ACTN4-210ENST00000588618 RTP3Q9BQQ7 232 aa24.07■■□□□ 1.44
ACTN4-210ENST00000588618 VN1R3Q9BXE9 311 aa24.07■■□□□ 1.44
ACTN4-210ENST00000588618 SEPT11Q9NVA2 429 aaKnown RBP24.07■■□□□ 1.44
ACTN4-210ENST00000588618 MED7O43513 233 aa24.07■■□□□ 1.44
ACTN4-210ENST00000588618 SOD2P04179 222 aa24.07■■□□□ 1.44
ACTN4-210ENST00000588618 CFHP08603 1231 aa24.07■■□□□ 1.44
ACTN4-210ENST00000588618 ACAT1P24752 427 aaKnown RBP24.07■■□□□ 1.44
ACTN4-210ENST00000588618 BMPR1AP36894 532 aa24.07■■□□□ 1.44
ACTN4-210ENST00000588618 TSPY1Q01534 308 aa24.07■■□□□ 1.44
ACTN4-210ENST00000588618 RAB30Q15771 203 aa24.07■■□□□ 1.44
ACTN4-210ENST00000588618 CCDC142Q17RM4 750 aa24.07■■□□□ 1.44
ACTN4-210ENST00000588618 DDX53Q86TM3 631 aaKnown RBP24.07■■□□□ 1.44
ACTN4-210ENST00000588618 PALB2Q86YC2 1186 aa24.07■■□□□ 1.44
ACTN4-210ENST00000588618 TFAP2BQ92481 460 aa24.07■■□□□ 1.44
ACTN4-210ENST00000588618 B3GALT6Q96L58 329 aa24.07■■□□□ 1.44
ACTN4-210ENST00000588618 LPIN3Q9BQK8 851 aa24.07■■□□□ 1.44
ACTN4-210ENST00000588618 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.07■■□□□ 1.44
ACTN4-210ENST00000588618 PLVAPQ9BX97 442 aa24.07■■□□□ 1.44
ACTN4-210ENST00000588618 CDH9Q9ULB4 789 aa24.07■■□□□ 1.44
ACTN4-210ENST00000588618 KIAA1257Q9ULG3 409 aa24.07■■□□□ 1.44
ACTN4-210ENST00000588618 PYCARDQ9ULZ3 195 aa24.07■■□□□ 1.44
ACTN4-210ENST00000588618 SGO2Q562F6 1265 aa24.06■■□□□ 1.44
ACTN4-210ENST00000588618 KIAA0319Q5VV43 1072 aa24.06■■□□□ 1.44
ACTN4-210ENST00000588618 TAF3Q5VWG9 929 aa24.06■■□□□ 1.44
ACTN4-210ENST00000588618 ANKS3Q6ZW76 656 aa24.06■■□□□ 1.44
ACTN4-210ENST00000588618 ZNF677Q86XU0 584 aa24.06■■□□□ 1.44
ACTN4-210ENST00000588618 KLHL23Q8NBE8 558 aa24.06■■□□□ 1.44
ACTN4-210ENST00000588618 B3GALNT2Q8NCR0 500 aa24.06■■□□□ 1.44
ACTN4-210ENST00000588618 LNX1Q8TBB1 728 aaPredicted RBP24.06■■□□□ 1.44
ACTN4-210ENST00000588618 SYT15Q9BQS2 421 aa24.06■■□□□ 1.44
ACTN4-210ENST00000588618 ACBD6Q9BR61 282 aa24.06■■□□□ 1.44
ACTN4-210ENST00000588618 PLXNA4Q9HCM2 1894 aa24.05■■□□□ 1.44
ACTN4-210ENST00000588618 SSU72P8A0A1W2PR75 194 aa24.05■■□□□ 1.44
ACTN4-210ENST00000588618 H7C4K7 107 aa24.05■■□□□ 1.44
ACTN4-210ENST00000588618 AKR1B10O60218 316 aa24.05■■□□□ 1.44
ACTN4-210ENST00000588618 ARHGEF15O94989 841 aa24.05■■□□□ 1.44
ACTN4-210ENST00000588618 OAZ2O95190 189 aa24.05■■□□□ 1.44
ACTN4-210ENST00000588618 VDRP11473 427 aa24.05■■□□□ 1.44
ACTN4-210ENST00000588618 BRD2P25440 801 aaKnown RBP24.05■■□□□ 1.44
ACTN4-210ENST00000588618 SSTR3P32745 418 aaPredicted RBP24.05■■□□□ 1.44
ACTN4-210ENST00000588618 PLCB3Q01970 1234 aa24.05■■□□□ 1.44
ACTN4-210ENST00000588618 CHRDL2Q6WN34 429 aa24.05■■□□□ 1.44
ACTN4-210ENST00000588618 TAS1R1Q7RTX1 841 aa24.05■■□□□ 1.44
ACTN4-210ENST00000588618 C12orf29Q8N999 325 aa24.05■■□□□ 1.44
ACTN4-210ENST00000588618 SAMD11Q96NU1 681 aa24.05■■□□□ 1.44
ACTN4-210ENST00000588618 SPTLC3Q9NUV7 552 aa24.05■■□□□ 1.44
ACTN4-210ENST00000588618 MTUS1Q9ULD2 1270 aa24.05■■□□□ 1.44
ACTN4-210ENST00000588618 ZNF263O14978 683 aa24.04■■□□□ 1.44
ACTN4-210ENST00000588618 ARHGAP6O43182 974 aa24.04■■□□□ 1.44
ACTN4-210ENST00000588618 URODP06132 367 aa24.04■■□□□ 1.44
ACTN4-210ENST00000588618 MMEP08473 750 aa24.04■■□□□ 1.44
ACTN4-210ENST00000588618 TNFAIP3P21580 790 aa24.04■■□□□ 1.44
ACTN4-210ENST00000588618 CYLC1P35663 651 aaPredicted RBP24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms