RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 CEP63Q96MT8 703 aa10.83□□□□□ -0.68
TPM4-207ENST00000588032 PGLYRP2Q96PD5 576 aa10.83□□□□□ -0.68
TPM4-207ENST00000588032 TMEM209Q96SK2 561 aa10.83□□□□□ -0.68
TPM4-207ENST00000588032 IMPG2Q9BZV3 1241 aa10.83□□□□□ -0.68
TPM4-207ENST00000588032 XYLT2Q9H1B5 865 aa10.83□□□□□ -0.68
TPM4-207ENST00000588032 SNX25Q9H3E2 840 aa10.83□□□□□ -0.68
TPM4-207ENST00000588032 METTL14Q9HCE5 456 aaKnown RBP10.83□□□□□ -0.68
TPM4-207ENST00000588032 ABCB6Q9NP58 842 aa10.83□□□□□ -0.68
TPM4-207ENST00000588032 LMBRD1Q9NUN5 540 aa10.83□□□□□ -0.68
TPM4-207ENST00000588032 IGSF9Q9P2J2 1179 aa10.83□□□□□ -0.68
TPM4-207ENST00000588032 EPS15L1Q9UBC2 864 aa10.83□□□□□ -0.68
TPM4-207ENST00000588032 DNMT3BQ9UBC3 853 aaKnown RBP10.83□□□□□ -0.68
TPM4-207ENST00000588032 LIMD1Q9UGP4 676 aa10.83□□□□□ -0.68
TPM4-207ENST00000588032 CDH9Q9ULB4 789 aa10.83□□□□□ -0.68
TPM4-207ENST00000588032 CDH7Q9ULB5 785 aa10.83□□□□□ -0.68
TPM4-207ENST00000588032 PCDHB5Q9Y5E4 795 aa10.83□□□□□ -0.68
TPM4-207ENST00000588032 SCN1AP35498 2009 aa10.82□□□□□ -0.68
TPM4-207ENST00000588032 PPP1R3GB7ZBB8 358 aa10.82□□□□□ -0.68
TPM4-207ENST00000588032 BIN1O00499 593 aa10.82□□□□□ -0.68
TPM4-207ENST00000588032 VNN2O95498 520 aa10.82□□□□□ -0.68
TPM4-207ENST00000588032 FGFR1OPO95684 399 aaKnown RBP10.82□□□□□ -0.68
TPM4-207ENST00000588032 FGF19O95750 216 aa10.82□□□□□ -0.68
TPM4-207ENST00000588032 RHOP08100 348 aa10.82□□□□□ -0.68
TPM4-207ENST00000588032 LAMP2P13473 410 aa10.82□□□□□ -0.68
TPM4-207ENST00000588032 BMP6P22004 513 aa10.82□□□□□ -0.68
TPM4-207ENST00000588032 SP100P23497 879 aaPredicted RBP10.82□□□□□ -0.68
TPM4-207ENST00000588032 PTPN21Q16825 1174 aa10.82□□□□□ -0.68
TPM4-207ENST00000588032 ZNF699Q32M78 642 aa10.82□□□□□ -0.68
TPM4-207ENST00000588032 INTS6LQ5JSJ4 861 aaKnown RBP10.82□□□□□ -0.68
TPM4-207ENST00000588032 C1orf220Q5T0J3 134 aa10.82□□□□□ -0.68
TPM4-207ENST00000588032 KRT39Q6A163 491 aa10.82□□□□□ -0.68
TPM4-207ENST00000588032 FILIP1Q7Z7B0 1213 aa10.82□□□□□ -0.68
TPM4-207ENST00000588032 ITIH5Q86UX2 942 aa10.82□□□□□ -0.68
TPM4-207ENST00000588032 CCDC150Q8NCX0 1101 aa10.82□□□□□ -0.68
TPM4-207ENST00000588032 FEZF2Q8TBJ5 459 aa10.82□□□□□ -0.68
TPM4-207ENST00000588032 FUBP3Q96I24 572 aaKnown RBP eCLIP10.82□□□□□ -0.68
TPM4-207ENST00000588032 FAXDC2Q96IV6 333 aa10.82□□□□□ -0.68
TPM4-207ENST00000588032 CLSTN2Q9H4D0 955 aa10.82□□□□□ -0.68
TPM4-207ENST00000588032 TMEM8AQ9HCN3 771 aa10.82□□□□□ -0.68
TPM4-207ENST00000588032 NXF1Q9UBU9 619 aaKnown RBP10.82□□□□□ -0.68
TPM4-207ENST00000588032 MUTYHQ9UIF7 546 aa10.82□□□□□ -0.68
TPM4-207ENST00000588032 SORCS3Q9UPU3 1222 aa10.82□□□□□ -0.68
TPM4-207ENST00000588032 SLC27A5Q9Y2P5 690 aa10.82□□□□□ -0.68
TPM4-207ENST00000588032 MRPS23Q9Y3D9 190 aaKnown RBP10.82□□□□□ -0.68
TPM4-207ENST00000588032 YIPF1Q9Y548 306 aa10.82□□□□□ -0.68
TPM4-207ENST00000588032 EYSQ5T1H1 3165 aa10.82□□□□□ -0.68
TPM4-207ENST00000588032 VNN1O95497 513 aa10.81□□□□□ -0.68
TPM4-207ENST00000588032 GNA14O95837 355 aa10.81□□□□□ -0.68
TPM4-207ENST00000588032 ASS1P00966 412 aaKnown RBP10.81□□□□□ -0.68
TPM4-207ENST00000588032 HAPLN1P10915 354 aaPredicted RBP10.81□□□□□ -0.68
TPM4-207ENST00000588032 CD44P16070 742 aaKnown RBP10.81□□□□□ -0.68
TPM4-207ENST00000588032 PIK3CAP42336 1068 aa10.81□□□□□ -0.68
TPM4-207ENST00000588032 GCLMP48507 274 aa10.81□□□□□ -0.68
TPM4-207ENST00000588032 PMS1P54277 932 aaKnown RBP10.81□□□□□ -0.68
TPM4-207ENST00000588032 EPHA5P54756 1037 aa10.81□□□□□ -0.68
TPM4-207ENST00000588032 RPL10AP62906 217 aaKnown RBP10.81□□□□□ -0.68
TPM4-207ENST00000588032 NTHL1P78549 312 aa10.81□□□□□ -0.68
TPM4-207ENST00000588032 PPP3CAQ08209 521 aa10.81□□□□□ -0.68
TPM4-207ENST00000588032 PAK1Q13153 545 aa10.81□□□□□ -0.68
TPM4-207ENST00000588032 MTMR3Q13615 1198 aa10.81□□□□□ -0.68
TPM4-207ENST00000588032 VEPH1Q14D04 833 aa10.81□□□□□ -0.68
TPM4-207ENST00000588032 MGAT5BQ3V5L5 792 aa10.81□□□□□ -0.68
TPM4-207ENST00000588032 CFAP221Q4G0U5 840 aa10.81□□□□□ -0.68
TPM4-207ENST00000588032 TTI2Q6NXR4 508 aa10.81□□□□□ -0.68
TPM4-207ENST00000588032 FAM171BQ6P995 826 aa10.81□□□□□ -0.68
TPM4-207ENST00000588032 C4orf50Q6ZRC1 276 aa10.81□□□□□ -0.68
TPM4-207ENST00000588032 PDZD4Q76G19 769 aaPredicted RBP10.81□□□□□ -0.68
TPM4-207ENST00000588032 GET4Q7L5D6 327 aaPredicted RBP10.81□□□□□ -0.68
TPM4-207ENST00000588032 FRMD5Q7Z6J6 570 aa10.81□□□□□ -0.68
TPM4-207ENST00000588032 SPATA2LQ8IUW3 424 aaPredicted RBP10.81□□□□□ -0.68
TPM4-207ENST00000588032 UBALD2Q8IYN6 164 aa10.81□□□□□ -0.68
TPM4-207ENST00000588032 MLKLQ8NB16 471 aa10.81□□□□□ -0.68
TPM4-207ENST00000588032 OR6B3Q8NGW1 331 aa10.81□□□□□ -0.68
TPM4-207ENST00000588032 KBTBD7Q8WVZ9 684 aa10.81□□□□□ -0.68
TPM4-207ENST00000588032 NELFBQ8WX92 580 aa10.81□□□□□ -0.68
TPM4-207ENST00000588032 EDAQ92838 391 aa10.81□□□□□ -0.68
TPM4-207ENST00000588032 FGF13Q92913 245 aa10.81□□□□□ -0.68
TPM4-207ENST00000588032 KHSRPQ92945 711 aaKnown RBP eCLIP10.81□□□□□ -0.68
TPM4-207ENST00000588032 CEP295NLQ96MC4 621 aa10.81□□□□□ -0.68
TPM4-207ENST00000588032 MYADMQ96S97 322 aa10.81□□□□□ -0.68
TPM4-207ENST00000588032 PKMYT1Q99640 499 aa10.81□□□□□ -0.68
TPM4-207ENST00000588032 CORO1BQ9BR76 489 aa10.81□□□□□ -0.68
TPM4-207ENST00000588032 GPR88Q9GZN0 384 aa10.81□□□□□ -0.68
TPM4-207ENST00000588032 DNAI2Q9GZS0 605 aa10.81□□□□□ -0.68
TPM4-207ENST00000588032 EPHX3Q9H6B9 360 aa10.81□□□□□ -0.68
TPM4-207ENST00000588032 ASAH2Q9NR71 780 aa10.81□□□□□ -0.68
TPM4-207ENST00000588032 HCFC1R1Q9NWW0 138 aa10.81□□□□□ -0.68
TPM4-207ENST00000588032 ABI2Q9NYB9 513 aaPredicted RBP10.81□□□□□ -0.68
TPM4-207ENST00000588032 GDE1Q9NZC3 331 aa10.81□□□□□ -0.68
TPM4-207ENST00000588032 CEP72Q9P209 647 aa10.81□□□□□ -0.68
TPM4-207ENST00000588032 ARMCX3Q9UH62 379 aaPredicted RBP10.81□□□□□ -0.68
TPM4-207ENST00000588032 GTF3C4Q9UKN8 822 aa10.81□□□□□ -0.68
TPM4-207ENST00000588032 PRUNE2Q8WUY3 3088 aa10.81□□□□□ -0.68
TPM4-207ENST00000588032 TRIM49BA6NDI0 452 aa10.8□□□□□ -0.68
TPM4-207ENST00000588032 GPR37L1O60883 481 aa10.8□□□□□ -0.68
TPM4-207ENST00000588032 N4BP1O75113 896 aaKnown RBP10.8□□□□□ -0.68
TPM4-207ENST00000588032 CLSTN1O94985 981 aa10.8□□□□□ -0.68
TPM4-207ENST00000588032 HLA-DRAP01903 254 aa10.8□□□□□ -0.68
TPM4-207ENST00000588032 TRIM49P0CI25 452 aa10.8□□□□□ -0.68
TPM4-207ENST00000588032 TRIM49CP0CI26 452 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms