RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 NTHL1P78549 312 aa11.16□□□□□ -0.62
SMARCA4-209ENST00000586122 BIRC3Q13489 604 aa11.16□□□□□ -0.62
SMARCA4-209ENST00000586122 PNOCQ13519 176 aa11.16□□□□□ -0.62
SMARCA4-209ENST00000586122 STIM1Q13586 685 aa11.16□□□□□ -0.62
SMARCA4-209ENST00000586122 HTR4Q13639 388 aa11.16□□□□□ -0.62
SMARCA4-209ENST00000586122 SOWAHAQ2M3V2 549 aa11.16□□□□□ -0.62
SMARCA4-209ENST00000586122 SLC39A12Q504Y0 691 aa11.16□□□□□ -0.62
SMARCA4-209ENST00000586122 ZCWPW2Q504Y3 356 aa11.16□□□□□ -0.62
SMARCA4-209ENST00000586122 INTS6LQ5JSJ4 861 aaKnown RBP11.16□□□□□ -0.62
SMARCA4-209ENST00000586122 PRSS36Q5K4E3 855 aa11.16□□□□□ -0.62
SMARCA4-209ENST00000586122 CEP135Q66GS9 1140 aa11.16□□□□□ -0.62
SMARCA4-209ENST00000586122 SUGP1Q8IWZ8 645 aaKnown RBP11.16□□□□□ -0.62
SMARCA4-209ENST00000586122 ATAD1Q8NBU5 361 aa11.16□□□□□ -0.62
SMARCA4-209ENST00000586122 TAF4BQ92750 862 aa11.16□□□□□ -0.62
SMARCA4-209ENST00000586122 FUBP3Q96I24 572 aaKnown RBP eCLIP11.16□□□□□ -0.62
SMARCA4-209ENST00000586122 TSG101Q99816 390 aa11.16□□□□□ -0.62
SMARCA4-209ENST00000586122 CORO1BQ9BR76 489 aa11.16□□□□□ -0.62
SMARCA4-209ENST00000586122 HCFC1R1Q9NWW0 138 aa11.16□□□□□ -0.62
SMARCA4-209ENST00000586122 CEP72Q9P209 647 aa11.16□□□□□ -0.62
SMARCA4-209ENST00000586122 CDH9Q9ULB4 789 aa11.16□□□□□ -0.62
SMARCA4-209ENST00000586122 PCDHB5Q9Y5E4 795 aa11.16□□□□□ -0.62
SMARCA4-209ENST00000586122 LRRIQ3A6PVS8 624 aaPredicted RBP11.15□□□□□ -0.62
SMARCA4-209ENST00000586122 HAPLN1P10915 354 aaPredicted RBP11.15□□□□□ -0.62
SMARCA4-209ENST00000586122 KRT13P13646 458 aa11.15□□□□□ -0.62
SMARCA4-209ENST00000586122 P4HA1P13674 534 aa11.15□□□□□ -0.62
SMARCA4-209ENST00000586122 PSMC2P35998 433 aaKnown RBP11.15□□□□□ -0.62
SMARCA4-209ENST00000586122 NUBP1P53384 320 aa11.15□□□□□ -0.62
SMARCA4-209ENST00000586122 UBE2HP62256 183 aa11.15□□□□□ -0.62
SMARCA4-209ENST00000586122 RPL10AP62906 217 aaKnown RBP11.15□□□□□ -0.62
SMARCA4-209ENST00000586122 LRRC63Q05C16 580 aa11.15□□□□□ -0.62
SMARCA4-209ENST00000586122 MGAT5BQ3V5L5 792 aa11.15□□□□□ -0.62
SMARCA4-209ENST00000586122 ZACNQ401N2 412 aa11.15□□□□□ -0.62
SMARCA4-209ENST00000586122 CFAP221Q4G0U5 840 aa11.15□□□□□ -0.62
SMARCA4-209ENST00000586122 C4orf50Q6ZRC1 276 aa11.15□□□□□ -0.62
SMARCA4-209ENST00000586122 SLC44A3Q8N4M1 653 aa11.15□□□□□ -0.62
SMARCA4-209ENST00000586122 FBXL6Q8N531 539 aa11.15□□□□□ -0.62
SMARCA4-209ENST00000586122 ITFG1Q8TB96 612 aa11.15□□□□□ -0.62
SMARCA4-209ENST00000586122 PSMG2Q969U7 264 aa11.15□□□□□ -0.62
SMARCA4-209ENST00000586122 PBXIP1Q96AQ6 731 aa11.15□□□□□ -0.62
SMARCA4-209ENST00000586122 E2F7Q96AV8 911 aa11.15□□□□□ -0.62
SMARCA4-209ENST00000586122 ASIC4Q96FT7 647 aa11.15□□□□□ -0.62
SMARCA4-209ENST00000586122 CEP295NLQ96MC4 621 aa11.15□□□□□ -0.62
SMARCA4-209ENST00000586122 TMEM209Q96SK2 561 aa11.15□□□□□ -0.62
SMARCA4-209ENST00000586122 MMS19Q96T76 1030 aa11.15□□□□□ -0.62
SMARCA4-209ENST00000586122 PRRX2Q99811 253 aa11.15□□□□□ -0.62
SMARCA4-209ENST00000586122 GZF1Q9H116 711 aaPredicted RBP11.15□□□□□ -0.62
SMARCA4-209ENST00000586122 SLC2A4RGQ9NR83 387 aa11.15□□□□□ -0.62
SMARCA4-209ENST00000586122 WNT16Q9UBV4 365 aa11.15□□□□□ -0.62
SMARCA4-209ENST00000586122 PCDHA5Q9Y5H7 936 aa11.15□□□□□ -0.62
SMARCA4-209ENST00000586122 PTPRDP23468 1912 aa11.15□□□□□ -0.62
SMARCA4-209ENST00000586122 DENND4CQ5VZ89 1909 aa11.15□□□□□ -0.62
SMARCA4-209ENST00000586122 SOBPA7XYQ1 873 aa11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 PSMA7O14818 248 aa11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 CETN3O15182 167 aa11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 STX10O60499 249 aa11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 ECI2O75521 394 aa11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 C4BPAP04003 597 aaKnown RBP11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 EPB41P11171 864 aaKnown RBP11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 COL9A1P20849 921 aa11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 CDC25CP30307 473 aa11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 GTF2H1P32780 548 aa11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 MAGEA11P43364 429 aa11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 CASP4P49662 377 aa11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 VAMP7P51809 220 aa11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 MCCD1P59942 119 aaPredicted RBP11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 PFKPQ01813 784 aa11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 ADAM9Q13443 819 aa11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 NCOA4Q13772 614 aa11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 TAF12Q16514 161 aa11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 SLC5A9Q2M3M2 681 aa11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 SGSM1Q2NKQ1 1148 aa11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 ZNF699Q32M78 642 aa11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 WDR72Q3MJ13 1102 aa11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 ZNF667Q5HYK9 610 aa11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 TDRD10Q5VZ19 366 aaKnown RBP11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 FAM171BQ6P995 826 aa11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 FOXR2Q6PJQ5 311 aa11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 HFE2Q6ZVN8 426 aa11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 DNAJB7Q7Z6W7 309 aaPredicted RBP11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 LRRTM3Q86VH5 581 aa11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 FAM186BQ8IYM0 893 aa11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 KBTBD7Q8WVZ9 684 aa11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 ZNF516Q92618 1163 aa11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 FAM84AQ96KN4 292 aa11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 GCNAQ96QF7 691 aa11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 PKMYT1Q99640 499 aa11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 SEPT5Q99719 369 aaPredicted RBP11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 SYT15Q9BQS2 421 aa11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 IMPG2Q9BZV3 1241 aa11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 XYLT2Q9H1B5 865 aa11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 DNAJC25Q9H1X3 360 aa11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 CRISPLD1Q9H336 500 aa11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 SNX25Q9H3E2 840 aa11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 ABI2Q9NYB9 513 aaPredicted RBP11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 MAPK8IP1Q9UQF2 711 aa11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 NUMBLQ9Y6R0 609 aa11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 NUP210Q8TEM1 1887 aaPredicted RBP11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 MUC6Q6W4X9 2439 aa11.14□□□□□ -0.63
SMARCA4-209ENST00000586122 AKAP3O75969 853 aa11.13□□□□□ -0.63
SMARCA4-209ENST00000586122 CST3P01034 146 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms