RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 DPY19L2P1Q6NXN4 242 aa18.05■□□□□ 0.48
HMG20B-215ENST00000585741 CCDC186Q7Z3E2 898 aa18.05■□□□□ 0.48
HMG20B-215ENST00000585741 SLC39A11Q8N1S5 342 aa18.05■□□□□ 0.48
HMG20B-215ENST00000585741 PDCL2Q8N4E4 241 aa18.05■□□□□ 0.48
HMG20B-215ENST00000585741 SPATA18Q8TC71 538 aa18.05■□□□□ 0.48
HMG20B-215ENST00000585741 SHC3Q92529 594 aa18.05■□□□□ 0.48
HMG20B-215ENST00000585741 TGS1Q96RS0 853 aaKnown RBP18.05■□□□□ 0.48
HMG20B-215ENST00000585741 NT5C1AQ9BXI3 368 aa18.05■□□□□ 0.48
HMG20B-215ENST00000585741 C11orf16Q9NQ32 467 aa18.05■□□□□ 0.48
HMG20B-215ENST00000585741 MARCH5Q9NX47 278 aa18.05■□□□□ 0.48
HMG20B-215ENST00000585741 MTUS1Q9ULD2 1270 aa18.05■□□□□ 0.48
HMG20B-215ENST00000585741 FOXN3O00409 490 aaPredicted RBP18.04■□□□□ 0.48
HMG20B-215ENST00000585741 WARSP23381 471 aaKnown RBP18.04■□□□□ 0.48
HMG20B-215ENST00000585741 PCSK1P29120 753 aa18.04■□□□□ 0.48
HMG20B-215ENST00000585741 CA8P35219 290 aa18.04■□□□□ 0.48
HMG20B-215ENST00000585741 YWHAHQ04917 246 aaPredicted RBP18.04■□□□□ 0.48
HMG20B-215ENST00000585741 PTK2Q05397 1052 aa18.04■□□□□ 0.48
HMG20B-215ENST00000585741 USP41Q3LFD5 358 aa18.04■□□□□ 0.48
HMG20B-215ENST00000585741 ZNF394Q53GI3 561 aa18.04■□□□□ 0.48
HMG20B-215ENST00000585741 TDRD12Q587J7 1177 aaKnown RBP18.04■□□□□ 0.48
HMG20B-215ENST00000585741 SMYD5Q6GMV2 418 aa18.04■□□□□ 0.48
HMG20B-215ENST00000585741 OVOS1Q6IE37 1185 aa18.04■□□□□ 0.48
HMG20B-215ENST00000585741 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.04■□□□□ 0.48
HMG20B-215ENST00000585741 UNC93AQ86WB7 457 aa18.04■□□□□ 0.48
HMG20B-215ENST00000585741 RBBP8NLQ8NC74 664 aaPredicted RBP18.04■□□□□ 0.48
HMG20B-215ENST00000585741 BAP1Q92560 729 aa18.04■□□□□ 0.48
HMG20B-215ENST00000585741 CLP1Q92989 425 aaKnown RBP18.04■□□□□ 0.48
HMG20B-215ENST00000585741 TNIP3Q96KP6 325 aa18.04■□□□□ 0.48
HMG20B-215ENST00000585741 SAMD11Q96NU1 681 aa18.04■□□□□ 0.48
HMG20B-215ENST00000585741 MRPL45Q9BRJ2 306 aaKnown RBP18.04■□□□□ 0.48
HMG20B-215ENST00000585741 C17orf80Q9BSJ5 609 aa18.04■□□□□ 0.48
HMG20B-215ENST00000585741 LRFN3Q9BTN0 628 aa18.04■□□□□ 0.48
HMG20B-215ENST00000585741 PDCL3Q9H2J4 239 aa18.04■□□□□ 0.48
HMG20B-215ENST00000585741 ABHD10Q9NUJ1 306 aa18.04■□□□□ 0.48
HMG20B-215ENST00000585741 AJAP1Q9UKB5 411 aaPredicted RBP18.04■□□□□ 0.48
HMG20B-215ENST00000585741 H7C4K7 107 aa18.03■□□□□ 0.48
HMG20B-215ENST00000585741 CILPO75339 1184 aa18.03■□□□□ 0.48
HMG20B-215ENST00000585741 CD19P15391 556 aa18.03■□□□□ 0.48
HMG20B-215ENST00000585741 TKTP29401 623 aaKnown RBP18.03■□□□□ 0.48
HMG20B-215ENST00000585741 BMPR1AP36894 532 aa18.03■□□□□ 0.48
HMG20B-215ENST00000585741 PDE6CP51160 858 aa18.03■□□□□ 0.48
HMG20B-215ENST00000585741 NDST1P52848 882 aa18.03■□□□□ 0.48
HMG20B-215ENST00000585741 JAM2P57087 298 aa18.03■□□□□ 0.48
HMG20B-215ENST00000585741 GOLGA8FQ08AF8 430 aa18.03■□□□□ 0.48
HMG20B-215ENST00000585741 GOLGA8DPQ0D2H9 430 aa18.03■□□□□ 0.48
HMG20B-215ENST00000585741 KLHL30Q0D2K2 578 aa18.03■□□□□ 0.48
HMG20B-215ENST00000585741 VPS36Q86VN1 386 aa18.03■□□□□ 0.48
HMG20B-215ENST00000585741 SYN2Q92777 582 aaPredicted RBP18.03■□□□□ 0.48
HMG20B-215ENST00000585741 PDLIM2Q96JY6 352 aa18.03■□□□□ 0.48
HMG20B-215ENST00000585741 TTPALQ9BTX7 342 aa18.03■□□□□ 0.48
HMG20B-215ENST00000585741 PLVAPQ9BX97 442 aa18.03■□□□□ 0.48
HMG20B-215ENST00000585741 SDCBP2Q9H190 292 aa18.03■□□□□ 0.48
HMG20B-215ENST00000585741 DDX43Q9NXZ2 648 aaKnown RBP18.03■□□□□ 0.48
HMG20B-215ENST00000585741 BZW2Q9Y6E2 419 aaKnown RBP18.03■□□□□ 0.48
HMG20B-215ENST00000585741 CYP26A1O43174 497 aa18.02■□□□□ 0.48
HMG20B-215ENST00000585741 FGF18O76093 207 aa18.02■□□□□ 0.48
HMG20B-215ENST00000585741 CYP11A1P05108 521 aa18.02■□□□□ 0.48
HMG20B-215ENST00000585741 URODP06132 367 aa18.02■□□□□ 0.48
HMG20B-215ENST00000585741 PDGFRBP09619 1106 aa18.02■□□□□ 0.48
HMG20B-215ENST00000585741 PNMA6AP0CW24 399 aaPredicted RBP18.02■□□□□ 0.48
HMG20B-215ENST00000585741 IGFBP6P24592 240 aaPredicted RBP18.02■□□□□ 0.48
HMG20B-215ENST00000585741 SCN1AP35498 2009 aa18.02■□□□□ 0.48
HMG20B-215ENST00000585741 TSPY1Q01534 308 aa18.02■□□□□ 0.48
HMG20B-215ENST00000585741 INCA1Q0VD86 236 aa18.02■□□□□ 0.48
HMG20B-215ENST00000585741 ZNF280DQ6N043 979 aa18.02■□□□□ 0.48
HMG20B-215ENST00000585741 CD300LGQ6UXG3 332 aa18.02■□□□□ 0.48
HMG20B-215ENST00000585741 DDX53Q86TM3 631 aaKnown RBP18.02■□□□□ 0.48
HMG20B-215ENST00000585741 TMEM173Q86WV6 379 aaPredicted RBP18.02■□□□□ 0.48
HMG20B-215ENST00000585741 GPIHBP1Q8IV16 184 aa18.02■□□□□ 0.48
HMG20B-215ENST00000585741 FAM71AQ8IYT1 594 aa18.02■□□□□ 0.48
HMG20B-215ENST00000585741 TMEM176AQ96HP8 235 aa18.02■□□□□ 0.48
HMG20B-215ENST00000585741 HEXIM2Q96MH2 286 aaKnown RBP18.02■□□□□ 0.48
HMG20B-215ENST00000585741 PANX2Q96RD6 677 aa18.02■□□□□ 0.48
HMG20B-215ENST00000585741 DNAJC7Q99615 494 aa18.02■□□□□ 0.48
HMG20B-215ENST00000585741 GPR62Q9BZJ7 368 aa18.02■□□□□ 0.48
HMG20B-215ENST00000585741 DEF6Q9H4E7 631 aa18.02■□□□□ 0.48
HMG20B-215ENST00000585741 SOD2P04179 222 aa18.01■□□□□ 0.47
HMG20B-215ENST00000585741 RB1P06400 928 aa18.01■□□□□ 0.47
HMG20B-215ENST00000585741 PAEPP09466 180 aa18.01■□□□□ 0.47
HMG20B-215ENST00000585741 ACO1P21399 889 aaKnown RBP18.01■□□□□ 0.47
HMG20B-215ENST00000585741 GNA15P30679 374 aa18.01■□□□□ 0.47
HMG20B-215ENST00000585741 CTXN3Q4LDR2 81 aa18.01■□□□□ 0.47
HMG20B-215ENST00000585741 ANKS3Q6ZW76 656 aa18.01■□□□□ 0.47
HMG20B-215ENST00000585741 VPS52Q8N1B4 723 aa18.01■□□□□ 0.47
HMG20B-215ENST00000585741 TC2NQ8N9U0 490 aa18.01■□□□□ 0.47
HMG20B-215ENST00000585741 KLHL23Q8NBE8 558 aa18.01■□□□□ 0.47
HMG20B-215ENST00000585741 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.01■□□□□ 0.47
HMG20B-215ENST00000585741 KBTBD7Q8WVZ9 684 aa18.01■□□□□ 0.47
HMG20B-215ENST00000585741 C11orf84Q9BUA3 381 aaPredicted RBP18.01■□□□□ 0.47
HMG20B-215ENST00000585741 OXCT2Q9BYC2 517 aaPredicted RBP18.01■□□□□ 0.47
HMG20B-215ENST00000585741 UBE2ZQ9H832 354 aaPredicted RBP18.01■□□□□ 0.47
HMG20B-215ENST00000585741 SEPT11Q9NVA2 429 aaKnown RBP18.01■□□□□ 0.47
HMG20B-215ENST00000585741 AIPL1Q9NZN9 384 aa18.01■□□□□ 0.47
HMG20B-215ENST00000585741 SSX2IPQ9Y2D8 614 aa18.01■□□□□ 0.47
HMG20B-215ENST00000585741 RNF225M0QZC1 329 aaPredicted RBP18■□□□□ 0.47
HMG20B-215ENST00000585741 THAP12O43422 761 aa18■□□□□ 0.47
HMG20B-215ENST00000585741 MED7O43513 233 aa18■□□□□ 0.47
HMG20B-215ENST00000585741 SERPING1P05155 500 aa18■□□□□ 0.47
HMG20B-215ENST00000585741 FGFR3P22607 806 aa18■□□□□ 0.47
HMG20B-215ENST00000585741 GLUD2P49448 558 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms