RNA–Protein interactions for RNA: ENST00000584716.1

CDK5R1-202, Transcript of cyclin dependent kinase 5 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CDK5R1, Length 962 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1-202ENST00000584716 STK39Q9UEW8 545 aa13.21□□□□□ -0.29
CDK5R1-202ENST00000584716 FBXL5Q9UKA1 691 aa13.21□□□□□ -0.29
CDK5R1-202ENST00000584716 LZTS1Q9Y250 596 aa13.21□□□□□ -0.29
CDK5R1-202ENST00000584716 STXBP5LQ9Y2K9 1186 aa13.21□□□□□ -0.29
CDK5R1-202ENST00000584716 RANBP2P49792 3224 aaKnown RBP13.21□□□□□ -0.29
CDK5R1-202ENST00000584716 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 LRRC53A6NM62 1247 aa13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 F8VZ95 297 aa13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 CYP26A1O43174 497 aa13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 ADAM12O43184 909 aa13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 LPXNO60711 386 aa13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 TPM1P09493 284 aa13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 FAM163BP0C2L3 166 aa13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 CTSAP10619 480 aa13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 RFX1P22670 979 aa13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 IRS1P35568 1242 aa13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 STAT1P42224 750 aa13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 FXR1P51114 621 aaKnown RBP eCLIP13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 RAD23BP54727 409 aa13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 ADKP55263 362 aaKnown RBP13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 JAM2P57087 298 aa13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 UBE3AQ05086 875 aa13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 INCA1Q0VD86 236 aa13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 CAMK1Q14012 370 aa13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 SMC1AQ14683 1233 aaKnown RBP13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 BMS1Q14692 1282 aaKnown RBP13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 PTPN14Q15678 1187 aa13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 CCDC142Q17RM4 750 aa13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 FIGNQ5HY92 759 aa13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 ZNF280DQ6N043 979 aa13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 SLC4A11Q8NBS3 891 aa13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 ZNF397Q8NF99 534 aaPredicted RBP13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 OR10T2Q8NGX3 314 aa13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 PIK3R5Q8WYR1 880 aa13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 SHC3Q92529 594 aa13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 BAP1Q92560 729 aa13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 ANP32BQ92688 251 aaKnown RBP13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 TMEM176AQ96HP8 235 aa13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 FAM161BQ96MY7 647 aa13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 SYT15Q9BQS2 421 aa13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 NT5C1AQ9BXI3 368 aa13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 TTYH3Q9C0H2 523 aa13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 TTYH1Q9H313 450 aaPredicted RBP13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 PRDM12Q9H4Q4 367 aa13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 ACP6Q9NPH0 428 aa13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 GTF3C4Q9UKN8 822 aa13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 CAPN11Q9UMQ6 739 aa13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 LUC7L2Q9Y383 392 aaKnown RBP13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 CDY1Q9Y6F8 540 aa13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 COL4A4P53420 1690 aaPredicted RBP13.2□□□□□ -0.3
CDK5R1-202ENST00000584716 A0A1W2PQJ5 194 aa13.19□□□□□ -0.3
CDK5R1-202ENST00000584716 MYBPHLA2RUH7 354 aa13.19□□□□□ -0.3
CDK5R1-202ENST00000584716 HIDE1A8MVS5 230 aa13.19□□□□□ -0.3
CDK5R1-202ENST00000584716 CPB1P15086 417 aa13.19□□□□□ -0.3
CDK5R1-202ENST00000584716 CD19P15391 556 aa13.19□□□□□ -0.3
CDK5R1-202ENST00000584716 PTPN1P18031 435 aaKnown RBP13.19□□□□□ -0.3
CDK5R1-202ENST00000584716 PCSK1P29120 753 aa13.19□□□□□ -0.3
CDK5R1-202ENST00000584716 CDC25BP30305 580 aa13.19□□□□□ -0.3
CDK5R1-202ENST00000584716 SSTR3P32745 418 aaPredicted RBP13.19□□□□□ -0.3
CDK5R1-202ENST00000584716 OR1D2P34982 312 aa13.19□□□□□ -0.3
CDK5R1-202ENST00000584716 CLCN1P35523 988 aa13.19□□□□□ -0.3
CDK5R1-202ENST00000584716 KRT9P35527 623 aa13.19□□□□□ -0.3
CDK5R1-202ENST00000584716 SOX5P35711 763 aa13.19□□□□□ -0.3
CDK5R1-202ENST00000584716 TSPY1Q01534 308 aa13.19□□□□□ -0.3
CDK5R1-202ENST00000584716 TBX2Q13207 712 aaPredicted RBP13.19□□□□□ -0.3
CDK5R1-202ENST00000584716 TRIM14Q14142 442 aa13.19□□□□□ -0.3
CDK5R1-202ENST00000584716 SLC39A12Q504Y0 691 aa13.19□□□□□ -0.3
CDK5R1-202ENST00000584716 MDH1BQ5I0G3 518 aa13.19□□□□□ -0.3
CDK5R1-202ENST00000584716 SFMBT2Q5VUG0 894 aa13.19□□□□□ -0.3
CDK5R1-202ENST00000584716 PDXDC1Q6P996 788 aa13.19□□□□□ -0.3
CDK5R1-202ENST00000584716 LRRTM3Q86VH5 581 aa13.19□□□□□ -0.3
CDK5R1-202ENST00000584716 UNC93AQ86WB7 457 aa13.19□□□□□ -0.3
CDK5R1-202ENST00000584716 PALB2Q86YC2 1186 aa13.19□□□□□ -0.3
CDK5R1-202ENST00000584716 TTC39CQ8N584 583 aa13.19□□□□□ -0.3
CDK5R1-202ENST00000584716 C12orf29Q8N999 325 aa13.19□□□□□ -0.3
CDK5R1-202ENST00000584716 JAKMIP2Q96AA8 810 aa13.19□□□□□ -0.3
CDK5R1-202ENST00000584716 TNIP3Q96KP6 325 aa13.19□□□□□ -0.3
CDK5R1-202ENST00000584716 CLSTN3Q9BQT9 956 aa13.19□□□□□ -0.3
CDK5R1-202ENST00000584716 ACBD6Q9BR61 282 aa13.19□□□□□ -0.3
CDK5R1-202ENST00000584716 EDEM3Q9BZQ6 932 aa13.19□□□□□ -0.3
CDK5R1-202ENST00000584716 FAM49BQ9NUQ9 324 aa13.19□□□□□ -0.3
CDK5R1-202ENST00000584716 MTRRQ9UBK8 725 aa13.19□□□□□ -0.3
CDK5R1-202ENST00000584716 CDH9Q9ULB4 789 aa13.19□□□□□ -0.3
CDK5R1-202ENST00000584716 SSX2IPQ9Y2D8 614 aa13.19□□□□□ -0.3
CDK5R1-202ENST00000584716 DAAM1Q9Y4D1 1078 aa13.19□□□□□ -0.3
CDK5R1-202ENST00000584716 CHD9Q3L8U1 2897 aa13.18□□□□□ -0.3
CDK5R1-202ENST00000584716 C2orf71A6NGG8 1288 aa13.18□□□□□ -0.3
CDK5R1-202ENST00000584716 OR6C75A6NL08 312 aa13.18□□□□□ -0.3
CDK5R1-202ENST00000584716 AKR1B15C9JRZ8 316 aaPredicted RBP13.18□□□□□ -0.3
CDK5R1-202ENST00000584716 FSCN2O14926 492 aa13.18□□□□□ -0.3
CDK5R1-202ENST00000584716 TBC1D4O60343 1298 aa13.18□□□□□ -0.3
CDK5R1-202ENST00000584716 LILRB3O75022 631 aa13.18□□□□□ -0.3
CDK5R1-202ENST00000584716 CNPP09543 421 aaKnown RBP13.18□□□□□ -0.3
CDK5R1-202ENST00000584716 ZBED6P86452 979 aa13.18□□□□□ -0.3
CDK5R1-202ENST00000584716 CYP27A1Q02318 531 aa13.18□□□□□ -0.3
CDK5R1-202ENST00000584716 GRIN2CQ14957 1233 aa13.18□□□□□ -0.3
CDK5R1-202ENST00000584716 INTS6LQ5JSJ4 861 aaKnown RBP13.18□□□□□ -0.3
CDK5R1-202ENST00000584716 ZNF697Q5TEC3 545 aa13.18□□□□□ -0.3
CDK5R1-202ENST00000584716 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.18□□□□□ -0.3
CDK5R1-202ENST00000584716 RBM23Q86U06 439 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms