RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 ALKBH5Q6P6C2 394 aaKnown RBP9.8□□□□□ -0.84
CASC3-209ENST00000583902 LCLAT1Q6UWP7 414 aa9.8□□□□□ -0.84
CASC3-209ENST00000583902 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.8□□□□□ -0.84
CASC3-209ENST00000583902 ANKS3Q6ZW76 656 aa9.8□□□□□ -0.84
CASC3-209ENST00000583902 ZNF571Q7Z3V5 609 aaPredicted RBP9.8□□□□□ -0.84
CASC3-209ENST00000583902 SLC47A2Q86VL8 602 aa9.8□□□□□ -0.84
CASC3-209ENST00000583902 DCP1BQ8IZD4 617 aaKnown RBP9.8□□□□□ -0.84
CASC3-209ENST00000583902 TNS4Q8IZW8 715 aa9.8□□□□□ -0.84
CASC3-209ENST00000583902 PDCL2Q8N4E4 241 aa9.8□□□□□ -0.84
CASC3-209ENST00000583902 RNF10Q8N5U6 811 aaKnown RBP9.8□□□□□ -0.84
CASC3-209ENST00000583902 TMEM35BQ8NCS4 154 aa9.8□□□□□ -0.84
CASC3-209ENST00000583902 OR6B3Q8NGW1 331 aa9.8□□□□□ -0.84
CASC3-209ENST00000583902 STK32AQ8WU08 396 aa9.8□□□□□ -0.84
CASC3-209ENST00000583902 C2orf15Q8WU43 125 aaKnown RBP9.8□□□□□ -0.84
CASC3-209ENST00000583902 CEP295NLQ96MC4 621 aa9.8□□□□□ -0.84
CASC3-209ENST00000583902 ZNF558Q96NG5 402 aa9.8□□□□□ -0.84
CASC3-209ENST00000583902 SAMD11Q96NU1 681 aa9.8□□□□□ -0.84
CASC3-209ENST00000583902 YME1L1Q96TA2 773 aa9.8□□□□□ -0.84
CASC3-209ENST00000583902 RAD9AQ99638 391 aa9.8□□□□□ -0.84
CASC3-209ENST00000583902 CHP1Q99653 195 aa9.8□□□□□ -0.84
CASC3-209ENST00000583902 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.8□□□□□ -0.84
CASC3-209ENST00000583902 UBXN6Q9BZV1 441 aa9.8□□□□□ -0.84
CASC3-209ENST00000583902 PDCL3Q9H2J4 239 aa9.8□□□□□ -0.84
CASC3-209ENST00000583902 HSFX1Q9UBD0 423 aa9.8□□□□□ -0.84
CASC3-209ENST00000583902 HESX1Q9UBX0 185 aa9.8□□□□□ -0.84
CASC3-209ENST00000583902 ADAMTS1Q9UHI8 967 aa9.8□□□□□ -0.84
CASC3-209ENST00000583902 NAGPAQ9UK23 515 aa9.8□□□□□ -0.84
CASC3-209ENST00000583902 STRIP2Q9ULQ0 834 aa9.8□□□□□ -0.84
CASC3-209ENST00000583902 L1RE1Q9UN81 338 aa9.8□□□□□ -0.84
CASC3-209ENST00000583902 PCDHB12Q9Y5F1 795 aa9.8□□□□□ -0.84
CASC3-209ENST00000583902 ADGRG1Q9Y653 693 aa9.8□□□□□ -0.84
CASC3-209ENST00000583902 A0A0A6YYK5 440 aaPredicted RBP9.79□□□□□ -0.84
CASC3-209ENST00000583902 ANKRD62A6NC57 917 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 SOWAHDA6NJG2 315 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 ZBBXA8MT70 800 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 NRP1O14786 923 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 PJA2O43164 708 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 DDHD2O94830 711 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 CALB1P05937 261 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 H2AFZP0C0S5 128 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 ATP2A2P16615 1042 aaKnown RBP9.79□□□□□ -0.84
CASC3-209ENST00000583902 CD58P19256 250 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 FGFR3P22607 806 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 VAV2P52735 878 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 NDST1P52848 882 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 PLCB3Q01970 1234 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 APBA1Q02410 837 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 CENPCQ03188 943 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 ARID5AQ03989 594 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 KRT17Q04695 432 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 YWHAHQ04917 246 aaPredicted RBP9.79□□□□□ -0.84
CASC3-209ENST00000583902 KIF5AQ12840 1032 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 TCEAL1Q15170 157 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 NFE2Q16621 373 aaPredicted RBP9.79□□□□□ -0.84
CASC3-209ENST00000583902 TIGD5Q53EQ6 642 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 COL13A1Q5TAT6 717 aaPredicted RBP9.79□□□□□ -0.84
CASC3-209ENST00000583902 OVOS1Q6IE37 1185 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 C4orf50Q6ZRC1 276 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 H2AFVQ71UI9 128 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 C16orf59Q7L2K0 433 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 OTOP2Q7RTS6 562 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 ZNF280BQ86YH2 543 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 ZDHHC17Q8IUH5 632 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 FIBCD1Q8N539 461 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 SLC4A11Q8NBS3 891 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 DDX1Q92499 740 aaKnown RBP9.79□□□□□ -0.84
CASC3-209ENST00000583902 CLP1Q92989 425 aaKnown RBP9.79□□□□□ -0.84
CASC3-209ENST00000583902 KAT5Q92993 513 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 TMEM169Q96HH4 297 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 FUBP3Q96I24 572 aaKnown RBP eCLIP9.79□□□□□ -0.84
CASC3-209ENST00000583902 HEXIM2Q96MH2 286 aaKnown RBP9.79□□□□□ -0.84
CASC3-209ENST00000583902 HNRNPABQ99729 332 aaKnown RBP9.79□□□□□ -0.84
CASC3-209ENST00000583902 ARID3AQ99856 593 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 ISCUQ9H1K1 167 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 CWH43Q9H720 699 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 SMYD3Q9H7B4 428 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 GOLGA2P5Q9HBQ8 144 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 PNPLA8Q9NP80 782 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 RYDENQ9NUL5 291 aaKnown RBP9.79□□□□□ -0.84
CASC3-209ENST00000583902 SPG21Q9NZD8 308 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 WDR35Q9P2L0 1181 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 POLIQ9UNA4 740 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 LZTS1Q9Y250 596 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 PPP2R2CQ9Y2T4 447 aa9.79□□□□□ -0.84
CASC3-209ENST00000583902 SPTLC1O15269 473 aa9.78□□□□□ -0.84
CASC3-209ENST00000583902 THAP12O43422 761 aa9.78□□□□□ -0.84
CASC3-209ENST00000583902 CYP1A1P04798 512 aaPredicted RBP9.78□□□□□ -0.84
CASC3-209ENST00000583902 RB1P06400 928 aa9.78□□□□□ -0.84
CASC3-209ENST00000583902 TMEM253P0C7T8 217 aa9.78□□□□□ -0.84
CASC3-209ENST00000583902 ACRP10323 421 aa9.78□□□□□ -0.84
CASC3-209ENST00000583902 BMP8BP34820 402 aa9.78□□□□□ -0.84
CASC3-209ENST00000583902 MAGEA1P43355 309 aa9.78□□□□□ -0.84
CASC3-209ENST00000583902 ACADSBP45954 432 aa9.78□□□□□ -0.84
CASC3-209ENST00000583902 NSFP46459 744 aaKnown RBP9.78□□□□□ -0.84
CASC3-209ENST00000583902 AFF1P51825 1210 aaKnown RBP9.78□□□□□ -0.84
CASC3-209ENST00000583902 GSCP56915 257 aaPredicted RBP9.78□□□□□ -0.84
CASC3-209ENST00000583902 BCAR1P56945 870 aa9.78□□□□□ -0.84
CASC3-209ENST00000583902 FMO1Q01740 532 aa9.78□□□□□ -0.84
CASC3-209ENST00000583902 TAP1Q03518 808 aa9.78□□□□□ -0.84
CASC3-209ENST00000583902 UBE3AQ05086 875 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms