RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 PCDHB12Q9Y5F1 795 aa12.79□□□□□ -0.36
CCDC57-216ENST00000582885 EPN1Q9Y6I3 576 aaPredicted RBP12.79□□□□□ -0.36
CCDC57-216ENST00000582885 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.79□□□□□ -0.36
CCDC57-216ENST00000582885 GREB1Q4ZG55 1949 aa12.78□□□□□ -0.36
CCDC57-216ENST00000582885 SOWAHDA6NJG2 315 aa12.78□□□□□ -0.36
CCDC57-216ENST00000582885 A8MXQ7 604 aa12.78□□□□□ -0.36
CCDC57-216ENST00000582885 EIF3CLB5ME19 914 aaKnown RBP12.78□□□□□ -0.36
CCDC57-216ENST00000582885 I3L4J1 428 aa12.78□□□□□ -0.36
CCDC57-216ENST00000582885 AKR1B10O60218 316 aa12.78□□□□□ -0.36
CCDC57-216ENST00000582885 CAPN15O75808 1086 aa12.78□□□□□ -0.36
CCDC57-216ENST00000582885 NDUFA10O95299 355 aa12.78□□□□□ -0.36
CCDC57-216ENST00000582885 CHRNB2P17787 502 aa12.78□□□□□ -0.36
CCDC57-216ENST00000582885 TNFAIP3P21580 790 aa12.78□□□□□ -0.36
CCDC57-216ENST00000582885 KIF11P52732 1056 aa12.78□□□□□ -0.36
CCDC57-216ENST00000582885 YWHAHQ04917 246 aaPredicted RBP12.78□□□□□ -0.36
CCDC57-216ENST00000582885 MRPL58Q14197 206 aaKnown RBP12.78□□□□□ -0.36
CCDC57-216ENST00000582885 SLC18A3Q16572 532 aa12.78□□□□□ -0.36
CCDC57-216ENST00000582885 SPOUT1Q5T280 376 aaKnown RBP12.78□□□□□ -0.36
CCDC57-216ENST00000582885 FAM171A1Q5VUB5 890 aa12.78□□□□□ -0.36
CCDC57-216ENST00000582885 ARHGAP17Q68EM7 881 aa12.78□□□□□ -0.36
CCDC57-216ENST00000582885 OVOS1Q6IE37 1185 aa12.78□□□□□ -0.36
CCDC57-216ENST00000582885 RAD9BQ6WBX8 426 aa12.78□□□□□ -0.36
CCDC57-216ENST00000582885 TRIM72Q6ZMU5 477 aa12.78□□□□□ -0.36
CCDC57-216ENST00000582885 GPR65Q8IYL9 337 aa12.78□□□□□ -0.36
CCDC57-216ENST00000582885 THEM5Q8N1Q8 247 aa12.78□□□□□ -0.36
CCDC57-216ENST00000582885 SLC30A5Q8TAD4 765 aa12.78□□□□□ -0.36
CCDC57-216ENST00000582885 OLIG1Q8TAK6 271 aa12.78□□□□□ -0.36
CCDC57-216ENST00000582885 ZNF830Q96NB3 372 aaPredicted RBP12.78□□□□□ -0.36
CCDC57-216ENST00000582885 EIF3CQ99613 913 aaKnown RBP12.78□□□□□ -0.36
CCDC57-216ENST00000582885 GPR62Q9BZJ7 368 aa12.78□□□□□ -0.36
CCDC57-216ENST00000582885 UBE2OQ9C0C9 1292 aaKnown RBP12.78□□□□□ -0.36
CCDC57-216ENST00000582885 DEF6Q9H4E7 631 aa12.78□□□□□ -0.36
CCDC57-216ENST00000582885 DDX43Q9NXZ2 648 aaKnown RBP12.78□□□□□ -0.36
CCDC57-216ENST00000582885 HMGXB4Q9UGU5 601 aa12.78□□□□□ -0.36
CCDC57-216ENST00000582885 CDH9Q9ULB4 789 aa12.78□□□□□ -0.36
CCDC57-216ENST00000582885 PCDHGC3Q9UN70 934 aa12.78□□□□□ -0.36
CCDC57-216ENST00000582885 NT5C1B-RDH14C9J2C7 533 aa12.77□□□□□ -0.37
CCDC57-216ENST00000582885 H0YGN5 161 aa12.77□□□□□ -0.37
CCDC57-216ENST00000582885 THAP12O43422 761 aa12.77□□□□□ -0.37
CCDC57-216ENST00000582885 GZMAP12544 262 aa12.77□□□□□ -0.37
CCDC57-216ENST00000582885 LMO2P25791 158 aa12.77□□□□□ -0.37
CCDC57-216ENST00000582885 FMO1Q01740 532 aa12.77□□□□□ -0.37
CCDC57-216ENST00000582885 PLCB3Q01970 1234 aa12.77□□□□□ -0.37
CCDC57-216ENST00000582885 CNGA2Q16280 664 aa12.77□□□□□ -0.37
CCDC57-216ENST00000582885 ZNF394Q53GI3 561 aa12.77□□□□□ -0.37
CCDC57-216ENST00000582885 SGO2Q562F6 1265 aa12.77□□□□□ -0.37
CCDC57-216ENST00000582885 C10orf76Q5T2E6 689 aa12.77□□□□□ -0.37
CCDC57-216ENST00000582885 PPP1R2P3Q6NXS1 205 aa12.77□□□□□ -0.37
CCDC57-216ENST00000582885 DDX53Q86TM3 631 aaKnown RBP12.77□□□□□ -0.37
CCDC57-216ENST00000582885 ACOT1Q86TX2 421 aa12.77□□□□□ -0.37
CCDC57-216ENST00000582885 TMEM173Q86WV6 379 aaPredicted RBP12.77□□□□□ -0.37
CCDC57-216ENST00000582885 B3GALNT2Q8NCR0 500 aa12.77□□□□□ -0.37
CCDC57-216ENST00000582885 SLC20A1Q8WUM9 679 aa12.77□□□□□ -0.37
CCDC57-216ENST00000582885 BCL7CQ8WUZ0 217 aaPredicted RBP12.77□□□□□ -0.37
CCDC57-216ENST00000582885 TFAP2BQ92481 460 aa12.77□□□□□ -0.37
CCDC57-216ENST00000582885 TMEM169Q96HH4 297 aa12.77□□□□□ -0.37
CCDC57-216ENST00000582885 HEXIM2Q96MH2 286 aaKnown RBP12.77□□□□□ -0.37
CCDC57-216ENST00000582885 RTP3Q9BQQ7 232 aa12.77□□□□□ -0.37
CCDC57-216ENST00000582885 PLVAPQ9BX97 442 aa12.77□□□□□ -0.37
CCDC57-216ENST00000582885 LHX5Q9H2C1 402 aa12.77□□□□□ -0.37
CCDC57-216ENST00000582885 ACP6Q9NPH0 428 aa12.77□□□□□ -0.37
CCDC57-216ENST00000582885 CHST7Q9NS84 486 aa12.77□□□□□ -0.37
CCDC57-216ENST00000582885 ADAMTS1Q9UHI8 967 aa12.77□□□□□ -0.37
CCDC57-216ENST00000582885 NENFQ9UMX5 172 aa12.77□□□□□ -0.37
CCDC57-216ENST00000582885 PCDHA11Q9Y5I1 949 aa12.77□□□□□ -0.37
CCDC57-216ENST00000582885 ZNF638Q14966 1978 aaKnown RBP12.77□□□□□ -0.37
CCDC57-216ENST00000582885 ATP8B3O60423 1300 aa12.77□□□□□ -0.37
CCDC57-216ENST00000582885 ATG2AQ2TAZ0 1938 aa12.76□□□□□ -0.37
CCDC57-216ENST00000582885 A0A087X0T9 212 aa12.76□□□□□ -0.37
CCDC57-216ENST00000582885 OR6C75A6NL08 312 aa12.76□□□□□ -0.37
CCDC57-216ENST00000582885 H7C4K7 107 aa12.76□□□□□ -0.37
CCDC57-216ENST00000582885 O00370 1275 aa12.76□□□□□ -0.37
CCDC57-216ENST00000582885 DDX3XO00571 662 aaKnown RBP eCLIP12.76□□□□□ -0.37
CCDC57-216ENST00000582885 IPO7O95373 1038 aaKnown RBP12.76□□□□□ -0.37
CCDC57-216ENST00000582885 LSM8O95777 96 aaKnown RBP12.76□□□□□ -0.37
CCDC57-216ENST00000582885 SOD2P04179 222 aa12.76□□□□□ -0.37
CCDC57-216ENST00000582885 MMEP08473 750 aa12.76□□□□□ -0.37
CCDC57-216ENST00000582885 PDGFRBP09619 1106 aa12.76□□□□□ -0.37
CCDC57-216ENST00000582885 FAM228BP0C875 321 aa12.76□□□□□ -0.37
CCDC57-216ENST00000582885 CD19P15391 556 aa12.76□□□□□ -0.37
CCDC57-216ENST00000582885 PTPN1P18031 435 aaKnown RBP12.76□□□□□ -0.37
CCDC57-216ENST00000582885 TKTP29401 623 aaKnown RBP12.76□□□□□ -0.37
CCDC57-216ENST00000582885 CDH5P33151 784 aaPredicted RBP12.76□□□□□ -0.37
CCDC57-216ENST00000582885 PBX3P40426 434 aa12.76□□□□□ -0.37
CCDC57-216ENST00000582885 KRT83P78385 493 aa12.76□□□□□ -0.37
CCDC57-216ENST00000582885 MTF1Q14872 753 aa12.76□□□□□ -0.37
CCDC57-216ENST00000582885 MAPRE1Q15691 268 aaKnown RBP12.76□□□□□ -0.37
CCDC57-216ENST00000582885 USP41Q3LFD5 358 aa12.76□□□□□ -0.37
CCDC57-216ENST00000582885 VARS2Q5ST30 1063 aaKnown RBP12.76□□□□□ -0.37
CCDC57-216ENST00000582885 FAM171BQ6P995 826 aa12.76□□□□□ -0.37
CCDC57-216ENST00000582885 LCLAT1Q6UWP7 414 aa12.76□□□□□ -0.37
CCDC57-216ENST00000582885 ANKS3Q6ZW76 656 aa12.76□□□□□ -0.37
CCDC57-216ENST00000582885 GLYCTKQ8IVS8 523 aa12.76□□□□□ -0.37
CCDC57-216ENST00000582885 LNX1Q8TBB1 728 aaPredicted RBP12.76□□□□□ -0.37
CCDC57-216ENST00000582885 SAMD11Q96NU1 681 aa12.76□□□□□ -0.37
CCDC57-216ENST00000582885 SYT15Q9BQS2 421 aa12.76□□□□□ -0.37
CCDC57-216ENST00000582885 ZSWIM1Q9BR11 485 aa12.76□□□□□ -0.37
CCDC57-216ENST00000582885 TTPALQ9BTX7 342 aa12.76□□□□□ -0.37
CCDC57-216ENST00000582885 HERC2P3Q9BVR0 1158 aa12.76□□□□□ -0.37
CCDC57-216ENST00000582885 ZNF518BQ9C0D4 1074 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms