RNA–Protein interactions for RNA: ENST00000582376.1

GGA3-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-212ENST00000582376 TOPORSQ9NS56 1045 aaPredicted RBP10.08□□□□□ -0.8
GGA3-212ENST00000582376 ANKEF1Q9NU02 776 aa10.08□□□□□ -0.8
GGA3-212ENST00000582376 PCDHB8Q9UN66 801 aa10.08□□□□□ -0.8
GGA3-212ENST00000582376 CCL26Q9Y258 94 aa10.08□□□□□ -0.8
GGA3-212ENST00000582376 USP20Q9Y2K6 914 aa10.08□□□□□ -0.8
GGA3-212ENST00000582376 SLC27A5Q9Y2P5 690 aa10.08□□□□□ -0.8
GGA3-212ENST00000582376 MYO16Q9Y6X6 1858 aa10.08□□□□□ -0.8
GGA3-212ENST00000582376 CELSR3Q9NYQ7 3312 aa10.08□□□□□ -0.8
GGA3-212ENST00000582376 PTPRDP23468 1912 aa10.07□□□□□ -0.8
GGA3-212ENST00000582376 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.07□□□□□ -0.8
GGA3-212ENST00000582376 TEX51A0A1B0GUA7 166 aa10.07□□□□□ -0.8
GGA3-212ENST00000582376 MTMR11A4FU01 709 aa10.07□□□□□ -0.8
GGA3-212ENST00000582376 CBFA2T3O75081 653 aa10.07□□□□□ -0.8
GGA3-212ENST00000582376 SOAT2O75908 522 aa10.07□□□□□ -0.8
GGA3-212ENST00000582376 RPL6Q02878 288 aaKnown RBP10.07□□□□□ -0.8
GGA3-212ENST00000582376 ZNF33AQ06730 810 aa10.07□□□□□ -0.8
GGA3-212ENST00000582376 GPR17Q13304 367 aa10.07□□□□□ -0.8
GGA3-212ENST00000582376 CAMK2BQ13554 666 aa10.07□□□□□ -0.8
GGA3-212ENST00000582376 XKR4Q5GH76 650 aa10.07□□□□□ -0.8
GGA3-212ENST00000582376 TTC22Q5TAA0 569 aa10.07□□□□□ -0.8
GGA3-212ENST00000582376 CREB3L3Q68CJ9 461 aa10.07□□□□□ -0.8
GGA3-212ENST00000582376 CENPPQ6IPU0 288 aa10.07□□□□□ -0.8
GGA3-212ENST00000582376 TMEM92Q6UXU6 159 aa10.07□□□□□ -0.8
GGA3-212ENST00000582376 MAEAQ7L5Y9 396 aa10.07□□□□□ -0.8
GGA3-212ENST00000582376 APBB1IPQ7Z5R6 666 aaPredicted RBP10.07□□□□□ -0.8
GGA3-212ENST00000582376 PGBD3Q8N328 593 aa10.07□□□□□ -0.8
GGA3-212ENST00000582376 DEFB119Q8N690 84 aa10.07□□□□□ -0.8
GGA3-212ENST00000582376 ATAD1Q8NBU5 361 aa10.07□□□□□ -0.8
GGA3-212ENST00000582376 HMGB4Q8WW32 186 aa10.07□□□□□ -0.8
GGA3-212ENST00000582376 CCDC94Q9BW85 323 aaPredicted RBP10.07□□□□□ -0.8
GGA3-212ENST00000582376 IL21Q9HBE4 155 aa10.07□□□□□ -0.8
GGA3-212ENST00000582376 KCNMB3Q9NPA1 279 aa10.07□□□□□ -0.8
GGA3-212ENST00000582376 GPRC5CQ9NQ84 441 aa10.07□□□□□ -0.8
GGA3-212ENST00000582376 TDP1Q9NUW8 608 aa10.07□□□□□ -0.8
GGA3-212ENST00000582376 PCOLCE2Q9UKZ9 415 aa10.07□□□□□ -0.8
GGA3-212ENST00000582376 TRIP11Q15643 1979 aa10.06□□□□□ -0.8
GGA3-212ENST00000582376 A0A1W2PQD8 194 aa10.06□□□□□ -0.8
GGA3-212ENST00000582376 OR6C75A6NL08 312 aa10.06□□□□□ -0.8
GGA3-212ENST00000582376 E9PAM4 449 aa10.06□□□□□ -0.8
GGA3-212ENST00000582376 PYCARD-AS1I3L0S3 204 aa10.06□□□□□ -0.8
GGA3-212ENST00000582376 K7EQS6 105 aa10.06□□□□□ -0.8
GGA3-212ENST00000582376 USO1O60763 962 aaKnown RBP10.06□□□□□ -0.8
GGA3-212ENST00000582376 SLITRK3O94933 977 aa10.06□□□□□ -0.8
GGA3-212ENST00000582376 OAZ2O95190 189 aa10.06□□□□□ -0.8
GGA3-212ENST00000582376 LYPLA2O95372 231 aa10.06□□□□□ -0.8
GGA3-212ENST00000582376 WISP1O95388 367 aa10.06□□□□□ -0.8
GGA3-212ENST00000582376 NTRK1P04629 796 aa10.06□□□□□ -0.8
GGA3-212ENST00000582376 HNRNPLP14866 589 aaKnown RBP eCLIP10.06□□□□□ -0.82e-7■■■■□ 23.5
GGA3-212ENST00000582376 DDX6P26196 483 aaKnown RBP eCLIP10.06□□□□□ -0.8
GGA3-212ENST00000582376 RARRES1P49788 294 aa10.06□□□□□ -0.8
GGA3-212ENST00000582376 MRPS21P82921 87 aaKnown RBP10.06□□□□□ -0.8
GGA3-212ENST00000582376 EXOSC10Q01780 885 aaKnown RBP10.06□□□□□ -0.8
GGA3-212ENST00000582376 NR1H3Q13133 447 aa10.06□□□□□ -0.8
GGA3-212ENST00000582376 VEPH1Q14D04 833 aa10.06□□□□□ -0.8
GGA3-212ENST00000582376 TAF12Q16514 161 aa10.06□□□□□ -0.8
GGA3-212ENST00000582376 ALKAL1Q6UXT8 129 aa10.06□□□□□ -0.8
GGA3-212ENST00000582376 SLC36A4Q6YBV0 504 aa10.06□□□□□ -0.8
GGA3-212ENST00000582376 GPR155Q7Z3F1 870 aa10.06□□□□□ -0.8
GGA3-212ENST00000582376 TTC9BQ8N6N2 239 aa10.06□□□□□ -0.8
GGA3-212ENST00000582376 MAB21L3Q8N8X9 362 aa10.06□□□□□ -0.8
GGA3-212ENST00000582376 FAM181AQ8N9Y4 354 aa10.06□□□□□ -0.8
GGA3-212ENST00000582376 RIN3Q8TB24 985 aa10.06□□□□□ -0.8
GGA3-212ENST00000582376 SETD7Q8WTS6 366 aaKnown RBP10.06□□□□□ -0.8
GGA3-212ENST00000582376 OSCP1Q8WVF1 389 aa10.06□□□□□ -0.8
GGA3-212ENST00000582376 ATP2A3Q93084 1043 aa10.06□□□□□ -0.8
GGA3-212ENST00000582376 LPIN3Q9BQK8 851 aa10.06□□□□□ -0.8
GGA3-212ENST00000582376 PI4K2AQ9BTU6 479 aa10.06□□□□□ -0.8
GGA3-212ENST00000582376 SH3GLB2Q9NR46 395 aa10.06□□□□□ -0.8
GGA3-212ENST00000582376 DUS2Q9NX74 493 aaKnown RBP10.06□□□□□ -0.8
GGA3-212ENST00000582376 PCDHA4Q9UN74 947 aa10.06□□□□□ -0.8
GGA3-212ENST00000582376 GOLGA4Q13439 2230 aaKnown RBP10.05□□□□□ -0.8
GGA3-212ENST00000582376 FAM149AA5PLN7 773 aa10.05□□□□□ -0.8
GGA3-212ENST00000582376 RRP8O43159 456 aaKnown RBP10.05□□□□□ -0.8
GGA3-212ENST00000582376 DKK1O94907 266 aa10.05□□□□□ -0.8
GGA3-212ENST00000582376 EDN1P05305 212 aa10.05□□□□□ -0.8
GGA3-212ENST00000582376 EIF2S3P41091 472 aaKnown RBP10.05□□□□□ -0.8
GGA3-212ENST00000582376 GRM5P41594 1212 aa10.05□□□□□ -0.8
GGA3-212ENST00000582376 IFNAR2P48551 515 aa10.05□□□□□ -0.8
GGA3-212ENST00000582376 ZNF268Q14587 947 aaPredicted RBP10.05□□□□□ -0.8
GGA3-212ENST00000582376 MTF1Q14872 753 aa10.05□□□□□ -0.8
GGA3-212ENST00000582376 INF2Q27J81 1249 aa10.05□□□□□ -0.8
GGA3-212ENST00000582376 PLEKHG6Q3KR16 790 aa10.05□□□□□ -0.8
GGA3-212ENST00000582376 TAF1BQ53T94 588 aaPredicted RBP10.05□□□□□ -0.8
GGA3-212ENST00000582376 ATF7IP2Q5U623 682 aa10.05□□□□□ -0.8
GGA3-212ENST00000582376 PCSK4Q6UW60 755 aa10.05□□□□□ -0.8
GGA3-212ENST00000582376 DHX32Q7L7V1 743 aaKnown RBP10.05□□□□□ -0.8
GGA3-212ENST00000582376 USP37Q86T82 979 aa10.05□□□□□ -0.8
GGA3-212ENST00000582376 C18orf25Q96B23 403 aaPredicted RBP10.05□□□□□ -0.8
GGA3-212ENST00000582376 ZMAT2Q96NC0 199 aaKnown RBP10.05□□□□□ -0.8
GGA3-212ENST00000582376 PNMA5Q96PV4 448 aa10.05□□□□□ -0.8
GGA3-212ENST00000582376 SEPT5Q99719 369 aaPredicted RBP10.05□□□□□ -0.8
GGA3-212ENST00000582376 RNF26Q9BY78 433 aaPredicted RBP10.05□□□□□ -0.8
GGA3-212ENST00000582376 LSG1Q9H089 658 aaKnown RBP10.05□□□□□ -0.8
GGA3-212ENST00000582376 CCDC113Q9H0I3 377 aa10.05□□□□□ -0.8
GGA3-212ENST00000582376 TOR4AQ9NXH8 423 aa10.05□□□□□ -0.8
GGA3-212ENST00000582376 HSFX1Q9UBD0 423 aa10.05□□□□□ -0.8
GGA3-212ENST00000582376 TIMM13Q9Y5L4 95 aaPredicted RBP10.05□□□□□ -0.8
GGA3-212ENST00000582376 PLXND1Q9Y4D7 1925 aa10.05□□□□□ -0.8
GGA3-212ENST00000582376 TCRBV21S2A2A0A5A6 115 aa10.04□□□□□ -0.8
GGA3-212ENST00000582376 ANTXRLA6NF34 631 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms