RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 NFX1Q12986 1120 aaKnown RBP15.53■□□□□ 0.08
MKS1-211ENST00000581761 XKR4Q5GH76 650 aa15.53■□□□□ 0.08
MKS1-211ENST00000581761 HABP4Q5JVS0 413 aaKnown RBP15.53■□□□□ 0.08
MKS1-211ENST00000581761 C9orf57Q5W0N0 161 aa15.53■□□□□ 0.08
MKS1-211ENST00000581761 CHRDL2Q6WN34 429 aa15.53■□□□□ 0.08
MKS1-211ENST00000581761 SLC39A5Q6ZMH5 540 aa15.53■□□□□ 0.08
MKS1-211ENST00000581761 CPNE8Q86YQ8 564 aa15.53■□□□□ 0.08
MKS1-211ENST00000581761 LRRC52Q8N7C0 313 aa15.53■□□□□ 0.08
MKS1-211ENST00000581761 CARD9Q9H257 536 aa15.53■□□□□ 0.08
MKS1-211ENST00000581761 FAM124BQ9H5Z6 455 aaPredicted RBP15.53■□□□□ 0.08
MKS1-211ENST00000581761 MRPL47Q9HD33 250 aaKnown RBP15.53■□□□□ 0.08
MKS1-211ENST00000581761 NOD1Q9Y239 953 aa15.53■□□□□ 0.08
MKS1-211ENST00000581761 SMIM28A0A1B0GU29 152 aa15.52■□□□□ 0.08
MKS1-211ENST00000581761 CCDC151A5D8V7 595 aa15.52■□□□□ 0.08
MKS1-211ENST00000581761 MOXD2PA6NHM9 499 aa15.52■□□□□ 0.08
MKS1-211ENST00000581761 SEC31AO94979 1220 aaKnown RBP15.52■□□□□ 0.08
MKS1-211ENST00000581761 VDRP11473 427 aa15.52■□□□□ 0.08
MKS1-211ENST00000581761 MMP8P22894 467 aa15.52■□□□□ 0.08
MKS1-211ENST00000581761 NDST1P52848 882 aa15.52■□□□□ 0.08
MKS1-211ENST00000581761 INCA1Q0VD86 236 aa15.52■□□□□ 0.08
MKS1-211ENST00000581761 ITGA7Q13683 1181 aa15.52■□□□□ 0.08
MKS1-211ENST00000581761 PLEKHA7Q6IQ23 1121 aa15.52■□□□□ 0.08
MKS1-211ENST00000581761 C8orf74Q6P047 294 aa15.52■□□□□ 0.08
MKS1-211ENST00000581761 CC2D1AQ6P1N0 951 aaPredicted RBP15.52■□□□□ 0.08
MKS1-211ENST00000581761 ERICH1Q86X53 443 aa15.52■□□□□ 0.08
MKS1-211ENST00000581761 HACE1Q8IYU2 909 aa15.52■□□□□ 0.08
MKS1-211ENST00000581761 C7orf61Q8IZ16 206 aa15.52■□□□□ 0.08
MKS1-211ENST00000581761 KRT35Q92764 455 aa15.52■□□□□ 0.08
MKS1-211ENST00000581761 ZNF560Q96MR9 790 aa15.52■□□□□ 0.08
MKS1-211ENST00000581761 LRRC1Q9BTT6 524 aa15.52■□□□□ 0.08
MKS1-211ENST00000581761 LHX5Q9H2C1 402 aa15.52■□□□□ 0.08
MKS1-211ENST00000581761 CHST12Q9NRB3 414 aa15.52■□□□□ 0.08
MKS1-211ENST00000581761 SNX9Q9Y5X1 595 aa15.52■□□□□ 0.08
MKS1-211ENST00000581761 TRIP11Q15643 1979 aa15.51■□□□□ 0.07
MKS1-211ENST00000581761 MYO1FO00160 1098 aa15.51■□□□□ 0.07
MKS1-211ENST00000581761 GPR182O15218 404 aa15.51■□□□□ 0.07
MKS1-211ENST00000581761 MICAL2O94851 1124 aa15.51■□□□□ 0.07
MKS1-211ENST00000581761 ITGA4P13612 1032 aa15.51■□□□□ 0.07
MKS1-211ENST00000581761 CYP3A5P20815 502 aa15.51■□□□□ 0.07
MKS1-211ENST00000581761 CTNNA1P35221 906 aaKnown RBP15.51■□□□□ 0.07
MKS1-211ENST00000581761 MARCKSL1P49006 195 aa15.51■□□□□ 0.07
MKS1-211ENST00000581761 PTK7Q13308 1070 aa15.51■□□□□ 0.07
MKS1-211ENST00000581761 ZNF211Q13398 564 aaPredicted RBP15.51■□□□□ 0.07
MKS1-211ENST00000581761 MAMLD1Q13495 774 aa15.51■□□□□ 0.07
MKS1-211ENST00000581761 LONRF2Q1L5Z9 754 aa15.51■□□□□ 0.07
MKS1-211ENST00000581761 GLE1Q53GS7 698 aaKnown RBP15.51■□□□□ 0.07
MKS1-211ENST00000581761 SGO2Q562F6 1265 aa15.51■□□□□ 0.07
MKS1-211ENST00000581761 SEL1L2Q5TEA6 688 aa15.51■□□□□ 0.07
MKS1-211ENST00000581761 DCAF12L1Q5VU92 463 aa15.51■□□□□ 0.07
MKS1-211ENST00000581761 WDR93Q6P2C0 686 aa15.51■□□□□ 0.07
MKS1-211ENST00000581761 DNAJC24Q6P3W2 148 aa15.51■□□□□ 0.07
MKS1-211ENST00000581761 FEZF2Q8TBJ5 459 aa15.51■□□□□ 0.07
MKS1-211ENST00000581761 ALG3Q92685 438 aa15.51■□□□□ 0.07
MKS1-211ENST00000581761 CD101Q93033 1021 aa15.51■□□□□ 0.07
MKS1-211ENST00000581761 RNPC3Q96LT9 517 aaKnown RBP15.51■□□□□ 0.07
MKS1-211ENST00000581761 HEXIM2Q96MH2 286 aaKnown RBP15.51■□□□□ 0.07
MKS1-211ENST00000581761 KRT12Q99456 494 aa15.51■□□□□ 0.07
MKS1-211ENST00000581761 MRPL45Q9BRJ2 306 aaKnown RBP15.51■□□□□ 0.07
MKS1-211ENST00000581761 NT5C1AQ9BXI3 368 aa15.51■□□□□ 0.07
MKS1-211ENST00000581761 TRIM7Q9C029 511 aa15.51■□□□□ 0.07
MKS1-211ENST00000581761 ERVK-5Q9HDB9 667 aa15.51■□□□□ 0.07
MKS1-211ENST00000581761 ARFGAP3Q9NP61 516 aa15.51■□□□□ 0.07
MKS1-211ENST00000581761 FAM105AQ9NUU6 356 aa15.51■□□□□ 0.07
MKS1-211ENST00000581761 PARVAQ9NVD7 372 aa15.51■□□□□ 0.07
MKS1-211ENST00000581761 TMEM59LQ9UK28 342 aa15.51■□□□□ 0.07
MKS1-211ENST00000581761 TTC7AQ9ULT0 858 aaPredicted RBP15.51■□□□□ 0.07
MKS1-211ENST00000581761 ALPK3Q96L96 1907 aa15.51■□□□□ 0.07
MKS1-211ENST00000581761 PDCD11Q14690 1871 aaKnown RBP15.5■□□□□ 0.07
MKS1-211ENST00000581761 TRIOBPQ9H2D6 2365 aa15.5■□□□□ 0.07
MKS1-211ENST00000581761 CCDC66A2RUB6 948 aa15.5■□□□□ 0.07
MKS1-211ENST00000581761 M0QYV0 167 aa15.5■□□□□ 0.07
MKS1-211ENST00000581761 KRIT1O00522 736 aa15.5■□□□□ 0.07
MKS1-211ENST00000581761 PIRO00625 290 aa15.5■□□□□ 0.07
MKS1-211ENST00000581761 PROSCO94903 275 aa15.5■□□□□ 0.07
MKS1-211ENST00000581761 GJB6O95452 261 aa15.5■□□□□ 0.07
MKS1-211ENST00000581761 FGGP02679 453 aa15.5■□□□□ 0.07
MKS1-211ENST00000581761 PNPLA4P41247 253 aa15.5■□□□□ 0.07
MKS1-211ENST00000581761 SLC1A1P43005 524 aa15.5■□□□□ 0.07
MKS1-211ENST00000581761 MRPS25P82663 173 aaKnown RBP15.5■□□□□ 0.07
MKS1-211ENST00000581761 PAK2Q13177 524 aa15.5■□□□□ 0.07
MKS1-211ENST00000581761 FBXO47Q5MNV8 452 aa15.5■□□□□ 0.07
MKS1-211ENST00000581761 DPH6Q7L8W6 267 aa15.5■□□□□ 0.07
MKS1-211ENST00000581761 KLHL7Q8IXQ5 586 aa15.5■□□□□ 0.07
MKS1-211ENST00000581761 WDTC1Q8N5D0 677 aa15.5■□□□□ 0.07
MKS1-211ENST00000581761 RUBCNQ92622 972 aa15.5■□□□□ 0.07
MKS1-211ENST00000581761 NAP1L3Q99457 506 aaPredicted RBP15.5■□□□□ 0.07
MKS1-211ENST00000581761 AP1M1Q9BXS5 423 aa15.5■□□□□ 0.07
MKS1-211ENST00000581761 STARD7Q9NQZ5 370 aa15.5■□□□□ 0.07
MKS1-211ENST00000581761 TRMT13Q9NUP7 481 aaKnown RBP15.5■□□□□ 0.07
MKS1-211ENST00000581761 ZNF446Q9NWS9 450 aa15.5■□□□□ 0.07
MKS1-211ENST00000581761 KIAA1257Q9ULG3 409 aa15.5■□□□□ 0.07
MKS1-211ENST00000581761 STRIP2Q9ULQ0 834 aa15.5■□□□□ 0.07
MKS1-211ENST00000581761 ZMYND8Q9ULU4 1186 aaPredicted RBP15.5■□□□□ 0.07
MKS1-211ENST00000581761 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.5■□□□□ 0.07
MKS1-211ENST00000581761 CCDC188H7C350 402 aa15.49■□□□□ 0.07
MKS1-211ENST00000581761 O00370 1275 aa15.49■□□□□ 0.07
MKS1-211ENST00000581761 SLC34A2O95436 690 aa15.49■□□□□ 0.07
MKS1-211ENST00000581761 GHRP10912 638 aa15.49■□□□□ 0.07
MKS1-211ENST00000581761 CD52P31358 61 aa15.49■□□□□ 0.07
MKS1-211ENST00000581761 TAF6P49848 677 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms