RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 JADE3Q92613 823 aa4.63□□□□□ -1.67
SMCHD1-206ENST00000581631 HDAC10Q969S8 669 aa4.63□□□□□ -1.67
SMCHD1-206ENST00000581631 ZC3H10Q96K80 434 aaKnown RBP4.63□□□□□ -1.67
SMCHD1-206ENST00000581631 TMEM79Q9BSE2 394 aa4.63□□□□□ -1.67
SMCHD1-206ENST00000581631 RLIMQ9NVW2 624 aa4.63□□□□□ -1.67
SMCHD1-206ENST00000581631 DLL3Q9NYJ7 618 aa4.63□□□□□ -1.67
SMCHD1-206ENST00000581631 LIMCH1Q9UPQ0 1083 aa4.63□□□□□ -1.67
SMCHD1-206ENST00000581631 WASHC2AQ641Q2 1341 aa4.63□□□□□ -1.67
SMCHD1-206ENST00000581631 SMIM35A0A1B0GVV1 85 aa4.62□□□□□ -1.67
SMCHD1-206ENST00000581631 F2RL2O00254 374 aa4.62□□□□□ -1.67
SMCHD1-206ENST00000581631 NXPH3O95157 252 aa4.62□□□□□ -1.67
SMCHD1-206ENST00000581631 MASP1P48740 699 aa4.62□□□□□ -1.67
SMCHD1-206ENST00000581631 DAZAP2Q15038 168 aaPredicted RBP4.62□□□□□ -1.67
SMCHD1-206ENST00000581631 CCDC93Q567U6 631 aa4.62□□□□□ -1.67
SMCHD1-206ENST00000581631 RBM20Q5T481 1227 aaKnown RBP4.62□□□□□ -1.67
SMCHD1-206ENST00000581631 VPS53Q5VIR6 699 aa4.62□□□□□ -1.67
SMCHD1-206ENST00000581631 RUSC1-AS1Q66K80 236 aa4.62□□□□□ -1.67
SMCHD1-206ENST00000581631 CATSPERGQ6ZRH7 1159 aa4.62□□□□□ -1.67
SMCHD1-206ENST00000581631 SAMD14Q8IZD0 417 aaPredicted RBP4.62□□□□□ -1.67
SMCHD1-206ENST00000581631 GALNT16Q8N428 558 aa4.62□□□□□ -1.67
SMCHD1-206ENST00000581631 NSUN6Q8TEA1 469 aaKnown RBP4.62□□□□□ -1.67
SMCHD1-206ENST00000581631 ATRIPQ8WXE1 791 aa4.62□□□□□ -1.67
SMCHD1-206ENST00000581631 FAM136AQ96C01 138 aa4.62□□□□□ -1.67
SMCHD1-206ENST00000581631 VPS16Q9H269 839 aa4.62□□□□□ -1.67
SMCHD1-206ENST00000581631 GPR35Q9HC97 309 aa4.62□□□□□ -1.67
SMCHD1-206ENST00000581631 SIDT1Q9NXL6 827 aaKnown RBP4.62□□□□□ -1.67
SMCHD1-206ENST00000581631 TUBA8Q9NY65 449 aaPredicted RBP4.62□□□□□ -1.67
SMCHD1-206ENST00000581631 AGAP1Q9UPQ3 857 aa4.62□□□□□ -1.67
SMCHD1-206ENST00000581631 CYP2D7A0A087X1C5 515 aa4.61□□□□□ -1.67
SMCHD1-206ENST00000581631 INSIG1O15503 277 aa4.61□□□□□ -1.67
SMCHD1-206ENST00000581631 SOAT2O75908 522 aa4.61□□□□□ -1.67
SMCHD1-206ENST00000581631 ONECUT2O95948 504 aa4.61□□□□□ -1.67
SMCHD1-206ENST00000581631 FAM163BP0C2L3 166 aa4.61□□□□□ -1.67
SMCHD1-206ENST00000581631 HABP2Q14520 560 aaPredicted RBP4.61□□□□□ -1.67
SMCHD1-206ENST00000581631 SLC29A4Q7RTT9 530 aa4.61□□□□□ -1.67
SMCHD1-206ENST00000581631 PPP1R32Q7Z5V6 425 aa4.61□□□□□ -1.67
SMCHD1-206ENST00000581631 CBARPQ8N350 705 aaPredicted RBP4.61□□□□□ -1.67
SMCHD1-206ENST00000581631 AOPEPQ8N6M6 819 aa4.61□□□□□ -1.67
SMCHD1-206ENST00000581631 C8orf58Q8NAV2 365 aa4.61□□□□□ -1.67
SMCHD1-206ENST00000581631 WDR66Q8TBY9 1149 aa4.61□□□□□ -1.67
SMCHD1-206ENST00000581631 SAP30BPQ9UHR5 308 aaKnown RBP4.61□□□□□ -1.67
SMCHD1-206ENST00000581631 SMIM22K7EJ46 135 aa4.6□□□□□ -1.67
SMCHD1-206ENST00000581631 BCAR3O75815 825 aa4.6□□□□□ -1.67
SMCHD1-206ENST00000581631 PDHA1P08559 390 aa4.6□□□□□ -1.67
SMCHD1-206ENST00000581631 VIL1P09327 827 aaKnown RBP4.6□□□□□ -1.67
SMCHD1-206ENST00000581631 NDUFB7P17568 137 aa4.6□□□□□ -1.67
SMCHD1-206ENST00000581631 FXR1P51114 621 aaKnown RBP eCLIP4.6□□□□□ -1.67
SMCHD1-206ENST00000581631 LINC00205P59089 165 aa4.6□□□□□ -1.67
SMCHD1-206ENST00000581631 ZNF618Q5T7W0 954 aa4.6□□□□□ -1.67
SMCHD1-206ENST00000581631 MAVSQ7Z434 540 aa4.6□□□□□ -1.67
SMCHD1-206ENST00000581631 DTX2Q86UW9 622 aa4.6□□□□□ -1.67
SMCHD1-206ENST00000581631 SPATA3Q8NHX4 192 aa4.6□□□□□ -1.67
SMCHD1-206ENST00000581631 KAT5Q92993 513 aa4.6□□□□□ -1.67
SMCHD1-206ENST00000581631 CLPTM1LQ96KA5 538 aa4.6□□□□□ -1.67
SMCHD1-206ENST00000581631 CAMKK2Q96RR4 588 aa4.6□□□□□ -1.67
SMCHD1-206ENST00000581631 PHLDB1Q86UU1 1377 aa4.6□□□□□ -1.67
SMCHD1-206ENST00000581631 ZNF785A8K8V0 405 aa4.59□□□□□ -1.67
SMCHD1-206ENST00000581631 DNAJB5O75953 348 aa4.59□□□□□ -1.67
SMCHD1-206ENST00000581631 CLSTN1O94985 981 aa4.59□□□□□ -1.67
SMCHD1-206ENST00000581631 CHEK2O96017 543 aa4.59□□□□□ -1.67
SMCHD1-206ENST00000581631 CBSLP0DN79 551 aa4.59□□□□□ -1.67
SMCHD1-206ENST00000581631 MALP21145 153 aa4.59□□□□□ -1.67
SMCHD1-206ENST00000581631 CD6P30203 668 aa4.59□□□□□ -1.67
SMCHD1-206ENST00000581631 CBSP35520 551 aa4.59□□□□□ -1.67
SMCHD1-206ENST00000581631 SNAPC2Q13487 334 aa4.59□□□□□ -1.67
SMCHD1-206ENST00000581631 BOP1Q14137 746 aaKnown RBP4.59□□□□□ -1.67
SMCHD1-206ENST00000581631 CT47A1Q5JQC4 288 aaPredicted RBP4.59□□□□□ -1.67
SMCHD1-206ENST00000581631 TEDDM1Q5T9Z0 273 aa4.59□□□□□ -1.67
SMCHD1-206ENST00000581631 RNF219Q5W0B1 726 aaPredicted RBP4.59□□□□□ -1.67
SMCHD1-206ENST00000581631 GADL1Q6ZQY3 521 aa4.59□□□□□ -1.67
SMCHD1-206ENST00000581631 KRT26Q7Z3Y9 468 aa4.59□□□□□ -1.67
SMCHD1-206ENST00000581631 ZNF804AQ7Z570 1209 aa4.59□□□□□ -1.67
SMCHD1-206ENST00000581631 WDR53Q7Z5U6 358 aaPredicted RBP4.59□□□□□ -1.67
SMCHD1-206ENST00000581631 CHSY1Q86X52 802 aa4.59□□□□□ -1.67
SMCHD1-206ENST00000581631 ZDHHC17Q8IUH5 632 aa4.59□□□□□ -1.67
SMCHD1-206ENST00000581631 HMCESQ96FZ2 354 aa4.59□□□□□ -1.67
SMCHD1-206ENST00000581631 CNPPD1Q9BV87 410 aa4.59□□□□□ -1.67
SMCHD1-206ENST00000581631 FAM126AQ9BYI3 521 aaPredicted RBP4.59□□□□□ -1.67
SMCHD1-206ENST00000581631 TINAGL1Q9GZM7 467 aaPredicted RBP4.59□□□□□ -1.67
SMCHD1-206ENST00000581631 PDGFCQ9NRA1 345 aa4.59□□□□□ -1.67
SMCHD1-206ENST00000581631 NOTCH4Q99466 2003 aa4.58□□□□□ -1.68
SMCHD1-206ENST00000581631 CCDC154A6NI56 674 aa4.58□□□□□ -1.68
SMCHD1-206ENST00000581631 KCNU1A8MYU2 1149 aa4.58□□□□□ -1.68
SMCHD1-206ENST00000581631 E5RJQ4 531 aa4.58□□□□□ -1.68
SMCHD1-206ENST00000581631 PPM1DO15297 605 aa4.58□□□□□ -1.68
SMCHD1-206ENST00000581631 GJB1P08034 283 aa4.58□□□□□ -1.68
SMCHD1-206ENST00000581631 CHRM3P20309 590 aa4.58□□□□□ -1.68
SMCHD1-206ENST00000581631 CYP2C19P33261 490 aa4.58□□□□□ -1.68
SMCHD1-206ENST00000581631 LIPAP38571 399 aa4.58□□□□□ -1.68
SMCHD1-206ENST00000581631 MMP13P45452 471 aa4.58□□□□□ -1.68
SMCHD1-206ENST00000581631 ZNF134P52741 427 aa4.58□□□□□ -1.68
SMCHD1-206ENST00000581631 ZNF135P52742 658 aaPredicted RBP4.58□□□□□ -1.68
SMCHD1-206ENST00000581631 PSMC1P62191 440 aaKnown RBP4.58□□□□□ -1.68
SMCHD1-206ENST00000581631 CYP4F2P78329 520 aa4.58□□□□□ -1.68
SMCHD1-206ENST00000581631 DSC2Q02487 901 aa4.58□□□□□ -1.68
SMCHD1-206ENST00000581631 ZNF260Q3ZCT1 412 aa4.58□□□□□ -1.68
SMCHD1-206ENST00000581631 SLC4A10Q6U841 1118 aa4.58□□□□□ -1.68
SMCHD1-206ENST00000581631 AMOTL1Q8IY63 956 aa4.58□□□□□ -1.68
SMCHD1-206ENST00000581631 FANCBQ8NB91 859 aa4.58□□□□□ -1.68
SMCHD1-206ENST00000581631 C1orf162Q8NEQ5 155 aaPredicted RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms