RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 ZSWIM1Q9BR11 485 aa14.73□□□□□ -0.05
CDK5RAP3-219ENST00000580670 LZTFL1Q9NQ48 299 aa14.73□□□□□ -0.05
CDK5RAP3-219ENST00000580670 TAS2R14Q9NYV8 317 aa14.73□□□□□ -0.05
CDK5RAP3-219ENST00000580670 ZMYND8Q9ULU4 1186 aaPredicted RBP14.73□□□□□ -0.05
CDK5RAP3-219ENST00000580670 FAM170AA1A519 330 aa14.73□□□□□ -0.05
CDK5RAP3-219ENST00000580670 RCCD1A6NED2 376 aa14.73□□□□□ -0.05
CDK5RAP3-219ENST00000580670 TMEM189-UBE2V1I3L0A0 370 aa14.73□□□□□ -0.05
CDK5RAP3-219ENST00000580670 MED7O43513 233 aa14.73□□□□□ -0.05
CDK5RAP3-219ENST00000580670 HCRTO43612 131 aa14.73□□□□□ -0.05
CDK5RAP3-219ENST00000580670 CFHP08603 1231 aa14.73□□□□□ -0.05
CDK5RAP3-219ENST00000580670 PDGFRBP09619 1106 aa14.73□□□□□ -0.05
CDK5RAP3-219ENST00000580670 LMO2P25791 158 aa14.73□□□□□ -0.05
CDK5RAP3-219ENST00000580670 ARHGAP29Q52LW3 1261 aa14.73□□□□□ -0.05
CDK5RAP3-219ENST00000580670 ACOT1Q86TX2 421 aa14.73□□□□□ -0.05
CDK5RAP3-219ENST00000580670 OSTM1Q86WC4 334 aa14.73□□□□□ -0.05
CDK5RAP3-219ENST00000580670 TXLNBQ8N3L3 684 aa14.73□□□□□ -0.05
CDK5RAP3-219ENST00000580670 DPF3Q92784 378 aa14.73□□□□□ -0.05
CDK5RAP3-219ENST00000580670 SUSD3Q96L08 255 aa14.73□□□□□ -0.05
CDK5RAP3-219ENST00000580670 TMEM175Q9BSA9 504 aa14.73□□□□□ -0.05
CDK5RAP3-219ENST00000580670 PACSIN1Q9BY11 444 aa14.73□□□□□ -0.05
CDK5RAP3-219ENST00000580670 TIMM13Q9Y5L4 95 aaPredicted RBP14.73□□□□□ -0.05
CDK5RAP3-219ENST00000580670 M0QZQ0 153 aa14.72□□□□□ -0.05
CDK5RAP3-219ENST00000580670 GABRDO14764 452 aa14.72□□□□□ -0.05
CDK5RAP3-219ENST00000580670 NRP1O14786 923 aa14.72□□□□□ -0.05
CDK5RAP3-219ENST00000580670 ALDH2P05091 517 aa14.72□□□□□ -0.05
CDK5RAP3-219ENST00000580670 VDRP11473 427 aa14.72□□□□□ -0.05
CDK5RAP3-219ENST00000580670 GZMAP12544 262 aa14.72□□□□□ -0.05
CDK5RAP3-219ENST00000580670 ARHGAP25P42331 645 aa14.72□□□□□ -0.05
CDK5RAP3-219ENST00000580670 SLC11A1P49279 550 aa14.72□□□□□ -0.05
CDK5RAP3-219ENST00000580670 EPHB4P54760 987 aa14.72□□□□□ -0.05
CDK5RAP3-219ENST00000580670 KIF5AQ12840 1032 aa14.72□□□□□ -0.05
CDK5RAP3-219ENST00000580670 CLEC16AQ2KHT3 1053 aa14.72□□□□□ -0.05
CDK5RAP3-219ENST00000580670 SGO2Q562F6 1265 aa14.72□□□□□ -0.05
CDK5RAP3-219ENST00000580670 PSRC1Q6PGN9 363 aaPredicted RBP14.72□□□□□ -0.05
CDK5RAP3-219ENST00000580670 TRIM72Q6ZMU5 477 aa14.72□□□□□ -0.05
CDK5RAP3-219ENST00000580670 METTL23Q86XA0 190 aa14.72□□□□□ -0.05
CDK5RAP3-219ENST00000580670 PASD1Q8IV76 773 aa14.72□□□□□ -0.05
CDK5RAP3-219ENST00000580670 COLEC11Q9BWP8 271 aa14.72□□□□□ -0.05
CDK5RAP3-219ENST00000580670 DNAI2Q9GZS0 605 aa14.72□□□□□ -0.05
CDK5RAP3-219ENST00000580670 LACRTQ9GZZ8 138 aa14.72□□□□□ -0.05
CDK5RAP3-219ENST00000580670 DPEP3Q9H4B8 488 aa14.72□□□□□ -0.05
CDK5RAP3-219ENST00000580670 DSEQ9UL01 958 aa14.72□□□□□ -0.05
CDK5RAP3-219ENST00000580670 KIAA1257Q9ULG3 409 aa14.72□□□□□ -0.05
CDK5RAP3-219ENST00000580670 STXBP5LQ9Y2K9 1186 aa14.72□□□□□ -0.05
CDK5RAP3-219ENST00000580670 FAN1Q9Y2M0 1017 aa14.72□□□□□ -0.05
CDK5RAP3-219ENST00000580670 ARHGEF37A1IGU5 675 aa14.71□□□□□ -0.05
CDK5RAP3-219ENST00000580670 RTN2O75298 545 aa14.71□□□□□ -0.05
CDK5RAP3-219ENST00000580670 TADA2AO75478 443 aa14.71□□□□□ -0.05
CDK5RAP3-219ENST00000580670 ABL1P00519 1130 aa14.71□□□□□ -0.05
CDK5RAP3-219ENST00000580670 FTLP02792 175 aaPredicted RBP14.71□□□□□ -0.05
CDK5RAP3-219ENST00000580670 H2AFZP0C0S5 128 aa14.71□□□□□ -0.05
CDK5RAP3-219ENST00000580670 LHX1P48742 406 aa14.71□□□□□ -0.05
CDK5RAP3-219ENST00000580670 TMEM240Q5SV17 173 aa14.71□□□□□ -0.05
CDK5RAP3-219ENST00000580670 H2AFVQ71UI9 128 aa14.71□□□□□ -0.05
CDK5RAP3-219ENST00000580670 ZNF689Q96CS4 500 aaPredicted RBP14.71□□□□□ -0.05
CDK5RAP3-219ENST00000580670 CYFIP2Q96F07 1278 aa14.71□□□□□ -0.05
CDK5RAP3-219ENST00000580670 LBHD1Q9BQE6 289 aaPredicted RBP14.71□□□□□ -0.05
CDK5RAP3-219ENST00000580670 TSGA10Q9BZW7 698 aa14.71□□□□□ -0.05
CDK5RAP3-219ENST00000580670 TRIM10Q9UDY6 481 aa14.71□□□□□ -0.05
CDK5RAP3-219ENST00000580670 PJA2O43164 708 aa14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 TRAPPC3O43617 180 aa14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 KRT86O43790 486 aa14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 CYP1A1P04798 512 aaPredicted RBP14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 CYP11A1P05108 521 aa14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 GALTP07902 379 aa14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 UNGP13051 313 aaPredicted RBP14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 GALCP54803 685 aa14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 BCAR1P56945 870 aa14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 NAA35Q5VZE5 725 aa14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 ZNF662Q6ZS27 426 aa14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 CRYBG2Q8N1P7 616 aa14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 C12orf29Q8N999 325 aa14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 CPA5Q8WXQ8 436 aa14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 TNIP3Q96KP6 325 aa14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.7□□□□□ -0.064e-16■□□□□ 11
CDK5RAP3-219ENST00000580670 ISCUQ9H1K1 167 aa14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 DDX43Q9NXZ2 648 aaKnown RBP14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 ADAM28Q9UKQ2 775 aa14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 INTUQ9ULD6 942 aa14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 GUCA1BQ9UMX6 200 aa14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 PCDHB8Q9UN66 801 aa14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 PCDHGC3Q9UN70 934 aa14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 PAXBP1Q9Y5B6 917 aa14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 COL4A6Q14031 1691 aa14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 O00370 1275 aa14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 TYMPP19971 482 aa14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 ACAT1P24752 427 aaKnown RBP14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 PBX3P40426 434 aa14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 BTG3Q14201 252 aaPredicted RBP14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 CNGA2Q16280 664 aa14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 SPOUT1Q5T280 376 aaKnown RBP14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 ACAD10Q6JQN1 1059 aa14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 CMTR2Q8IYT2 770 aaKnown RBP14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 SPATA18Q8TC71 538 aa14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 C16orf45Q96MC5 204 aaPredicted RBP14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 YME1L1Q96TA2 773 aa14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 CWH43Q9H720 699 aa14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 RC3H2Q9HBD1 1191 aaKnown RBP14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 FAM49BQ9NUQ9 324 aa14.7□□□□□ -0.06
CDK5RAP3-219ENST00000580670 MARCH5Q9NX47 278 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms