RNA–Protein interactions for RNA: ENST00000580573.1

KPNB1-210, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-210ENST00000580573 C11orf49Q9H6J7 331 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 LZTFL1Q9NQ48 299 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.5□□□□□ -1.052e-7■□□□□ 10.1
KPNB1-210ENST00000580573 TAS2R14Q9NYV8 317 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 HMGXB4Q9UGU5 601 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 TFR2Q9UP52 801 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 NME7Q9Y5B8 376 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 PCDHB4Q9Y5E5 795 aa8.5□□□□□ -1.05
KPNB1-210ENST00000580573 KPNA7A9QM74 516 aa8.49□□□□□ -1.05
KPNB1-210ENST00000580573 TMEM189-UBE2V1I3L0A0 370 aa8.49□□□□□ -1.05
KPNB1-210ENST00000580573 ENPP3O14638 875 aa8.49□□□□□ -1.05
KPNB1-210ENST00000580573 GABRDO14764 452 aa8.49□□□□□ -1.05
KPNB1-210ENST00000580573 KIF5CO60282 957 aa8.49□□□□□ -1.05
KPNB1-210ENST00000580573 MYCP01106 439 aaPredicted RBP8.49□□□□□ -1.05
KPNB1-210ENST00000580573 CLTBP09497 229 aa8.49□□□□□ -1.05
KPNB1-210ENST00000580573 H2AFZP0C0S5 128 aa8.49□□□□□ -1.05
KPNB1-210ENST00000580573 KRT5P13647 590 aa8.49□□□□□ -1.05
KPNB1-210ENST00000580573 TNFAIP3P21580 790 aa8.49□□□□□ -1.05
KPNB1-210ENST00000580573 WARSP23381 471 aaKnown RBP8.49□□□□□ -1.05
KPNB1-210ENST00000580573 GCGRP47871 477 aa8.49□□□□□ -1.05
KPNB1-210ENST00000580573 SCNN1GP51170 649 aa8.49□□□□□ -1.05
KPNB1-210ENST00000580573 GALCP54803 685 aa8.49□□□□□ -1.05
KPNB1-210ENST00000580573 GSCP56915 257 aaPredicted RBP8.49□□□□□ -1.05
KPNB1-210ENST00000580573 TNNC1P63316 161 aa8.49□□□□□ -1.05
KPNB1-210ENST00000580573 PTP4A2Q12974 167 aa8.49□□□□□ -1.05
KPNB1-210ENST00000580573 TUSC3Q13454 348 aa8.49□□□□□ -1.05
KPNB1-210ENST00000580573 LRRC26Q2I0M4 334 aa8.49□□□□□ -1.05
KPNB1-210ENST00000580573 SOWAHAQ2M3V2 549 aa8.49□□□□□ -1.05
KPNB1-210ENST00000580573 SV2CQ496J9 727 aa8.49□□□□□ -1.05
KPNB1-210ENST00000580573 CLLU1OSQ5K130 101 aa8.49□□□□□ -1.05
KPNB1-210ENST00000580573 ADGRD1Q6QNK2 874 aa8.49□□□□□ -1.05
KPNB1-210ENST00000580573 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.49□□□□□ -1.05
KPNB1-210ENST00000580573 H2AFVQ71UI9 128 aa8.49□□□□□ -1.05
KPNB1-210ENST00000580573 MON1BQ7L1V2 547 aa8.49□□□□□ -1.05
KPNB1-210ENST00000580573 SLFN11Q7Z7L1 901 aa8.49□□□□□ -1.05
KPNB1-210ENST00000580573 PHF13Q86YI8 300 aaPredicted RBP8.49□□□□□ -1.05
KPNB1-210ENST00000580573 TOP6BLQ8N6T0 577 aa8.49□□□□□ -1.05
KPNB1-210ENST00000580573 C3orf58Q8NDZ4 430 aa8.49□□□□□ -1.05
KPNB1-210ENST00000580573 RFFLQ8WZ73 363 aa8.49□□□□□ -1.05
KPNB1-210ENST00000580573 TFAP2BQ92481 460 aa8.49□□□□□ -1.05
KPNB1-210ENST00000580573 SEPT8Q92599 483 aa8.49□□□□□ -1.05
KPNB1-210ENST00000580573 SECISBP2LQ93073 1101 aaKnown RBP8.49□□□□□ -1.05
KPNB1-210ENST00000580573 PAWRQ96IZ0 340 aaKnown RBP8.49□□□□□ -1.05
KPNB1-210ENST00000580573 VCPIP1Q96JH7 1222 aa8.49□□□□□ -1.05
KPNB1-210ENST00000580573 RPS6KC1Q96S38 1066 aa8.49□□□□□ -1.05
KPNB1-210ENST00000580573 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.49□□□□□ -1.05
KPNB1-210ENST00000580573 ZNF518BQ9C0D4 1074 aa8.49□□□□□ -1.05
KPNB1-210ENST00000580573 ELOVL4Q9GZR5 314 aa8.49□□□□□ -1.05
KPNB1-210ENST00000580573 LHX5Q9H2C1 402 aa8.49□□□□□ -1.05
KPNB1-210ENST00000580573 L2HGDHQ9H9P8 463 aa8.49□□□□□ -1.05
KPNB1-210ENST00000580573 GOLGA2P5Q9HBQ8 144 aa8.49□□□□□ -1.05
KPNB1-210ENST00000580573 AVENQ9NQS1 362 aaPredicted RBP8.49□□□□□ -1.05
KPNB1-210ENST00000580573 NXF1Q9UBU9 619 aaKnown RBP8.49□□□□□ -1.05
KPNB1-210ENST00000580573 GTF3C4Q9UKN8 822 aa8.49□□□□□ -1.05
KPNB1-210ENST00000580573 KIAA1257Q9ULG3 409 aa8.49□□□□□ -1.05
KPNB1-210ENST00000580573 CAPN6Q9Y6Q1 641 aa8.49□□□□□ -1.05
KPNB1-210ENST00000580573 DUSP10Q9Y6W6 482 aa8.49□□□□□ -1.05
KPNB1-210ENST00000580573 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.48□□□□□ -1.05
KPNB1-210ENST00000580573 TCRBV5S1A1TA0A578 114 aa8.48□□□□□ -1.05
KPNB1-210ENST00000580573 M0QZQ0 153 aa8.48□□□□□ -1.05
KPNB1-210ENST00000580573 O00370 1275 aa8.48□□□□□ -1.05
KPNB1-210ENST00000580573 PODXLO00592 558 aa8.48□□□□□ -1.05
KPNB1-210ENST00000580573 B4GALT3O60512 393 aa8.48□□□□□ -1.05
KPNB1-210ENST00000580573 CYP11A1P05108 521 aa8.48□□□□□ -1.05
KPNB1-210ENST00000580573 CYP1A2P05177 515 aa8.48□□□□□ -1.05
KPNB1-210ENST00000580573 CFHP08603 1231 aa8.48□□□□□ -1.05
KPNB1-210ENST00000580573 CD58P19256 250 aa8.48□□□□□ -1.05
KPNB1-210ENST00000580573 USP8P40818 1118 aa8.48□□□□□ -1.05
KPNB1-210ENST00000580573 RAP1GAPP47736 663 aa8.48□□□□□ -1.05
KPNB1-210ENST00000580573 CLCNKBP51801 687 aa8.48□□□□□ -1.05
KPNB1-210ENST00000580573 NDST1P52848 882 aa8.48□□□□□ -1.05
KPNB1-210ENST00000580573 CDH8P55286 799 aa8.48□□□□□ -1.05
KPNB1-210ENST00000580573 GNG11P61952 73 aa8.48□□□□□ -1.05
KPNB1-210ENST00000580573 AMPD2Q01433 879 aa8.48□□□□□ -1.05
KPNB1-210ENST00000580573 PKDCCQ504Y2 493 aa8.48□□□□□ -1.05
KPNB1-210ENST00000580573 ACAD10Q6JQN1 1059 aa8.48□□□□□ -1.05
KPNB1-210ENST00000580573 SYT10Q6XYQ8 523 aa8.48□□□□□ -1.05
KPNB1-210ENST00000580573 SCARA5Q6ZMJ2 495 aa8.48□□□□□ -1.05
KPNB1-210ENST00000580573 NECAB2Q7Z6G3 386 aa8.48□□□□□ -1.05
KPNB1-210ENST00000580573 CRYBG2Q8N1P7 616 aa8.48□□□□□ -1.05
KPNB1-210ENST00000580573 SLC35F6Q8N357 371 aa8.48□□□□□ -1.05
KPNB1-210ENST00000580573 WDTC1Q8N5D0 677 aa8.48□□□□□ -1.05
KPNB1-210ENST00000580573 LRRC57Q8N9N7 239 aa8.48□□□□□ -1.05
KPNB1-210ENST00000580573 TRIM58Q8NG06 486 aa8.48□□□□□ -1.05
KPNB1-210ENST00000580573 KIF18AQ8NI77 898 aa8.48□□□□□ -1.05
KPNB1-210ENST00000580573 UBE2Q2Q8WVN8 375 aa8.48□□□□□ -1.05
KPNB1-210ENST00000580573 TMEM176AQ96HP8 235 aa8.48□□□□□ -1.05
KPNB1-210ENST00000580573 MRPL45Q9BRJ2 306 aaKnown RBP8.48□□□□□ -1.05
KPNB1-210ENST00000580573 LIMD1Q9UGP4 676 aa8.48□□□□□ -1.05
KPNB1-210ENST00000580573 L1RE1Q9UN81 338 aa8.48□□□□□ -1.05
KPNB1-210ENST00000580573 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.48□□□□□ -1.05
KPNB1-210ENST00000580573 STXBP5LQ9Y2K9 1186 aa8.48□□□□□ -1.05
KPNB1-210ENST00000580573 PAXBP1Q9Y5B6 917 aa8.48□□□□□ -1.05
KPNB1-210ENST00000580573 SNX9Q9Y5X1 595 aa8.48□□□□□ -1.05
KPNB1-210ENST00000580573 GREB1Q4ZG55 1949 aa8.47□□□□□ -1.05
KPNB1-210ENST00000580573 HOXA2O43364 376 aa8.47□□□□□ -1.05
KPNB1-210ENST00000580573 THAP12O43422 761 aa8.47□□□□□ -1.05
KPNB1-210ENST00000580573 MED7O43513 233 aa8.47□□□□□ -1.05
KPNB1-210ENST00000580573 EFEMP2O95967 443 aa8.47□□□□□ -1.05
KPNB1-210ENST00000580573 TIMP1P01033 207 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms