RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 MFSD14AQ96MC6 490 aa11.69□□□□□ -0.54
NDEL1-208ENST00000580237 TIGD1Q96MW7 591 aa11.69□□□□□ -0.54
NDEL1-208ENST00000580237 GSDMAQ96QA5 445 aa11.69□□□□□ -0.54
NDEL1-208ENST00000580237 TSG101Q99816 390 aa11.69□□□□□ -0.54
NDEL1-208ENST00000580237 RTP3Q9BQQ7 232 aa11.69□□□□□ -0.54
NDEL1-208ENST00000580237 CEP72Q9P209 647 aa11.69□□□□□ -0.54
NDEL1-208ENST00000580237 DUSP12Q9UNI6 340 aa11.69□□□□□ -0.54
NDEL1-208ENST00000580237 TRAF3IP3Q9Y228 551 aa11.69□□□□□ -0.54
NDEL1-208ENST00000580237 PCDHB5Q9Y5E4 795 aa11.69□□□□□ -0.54
NDEL1-208ENST00000580237 NUMBLQ9Y6R0 609 aa11.69□□□□□ -0.54
NDEL1-208ENST00000580237 LRRIQ3A6PVS8 624 aaPredicted RBP11.68□□□□□ -0.54
NDEL1-208ENST00000580237 VNN2O95498 520 aa11.68□□□□□ -0.54
NDEL1-208ENST00000580237 PIK3CAP42336 1068 aa11.68□□□□□ -0.54
NDEL1-208ENST00000580237 TUFMP49411 452 aaKnown RBP11.68□□□□□ -0.54
NDEL1-208ENST00000580237 SNW1Q13573 536 aaKnown RBP11.68□□□□□ -0.54
NDEL1-208ENST00000580237 HTR4Q13639 388 aa11.68□□□□□ -0.54
NDEL1-208ENST00000580237 WDR72Q3MJ13 1102 aa11.68□□□□□ -0.54
NDEL1-208ENST00000580237 ZNF658Q5TYW1 1059 aaPredicted RBP11.68□□□□□ -0.54
NDEL1-208ENST00000580237 SPATA2LQ8IUW3 424 aaPredicted RBP11.68□□□□□ -0.54
NDEL1-208ENST00000580237 FAM186BQ8IYM0 893 aa11.68□□□□□ -0.54
NDEL1-208ENST00000580237 HS6ST3Q8IZP7 471 aa11.68□□□□□ -0.54
NDEL1-208ENST00000580237 ENGASEQ8NFI3 743 aa11.68□□□□□ -0.54
NDEL1-208ENST00000580237 CXorf38Q8TB03 319 aa11.68□□□□□ -0.54
NDEL1-208ENST00000580237 ERCC4Q92889 916 aaPredicted RBP11.68□□□□□ -0.54
NDEL1-208ENST00000580237 MCRS1Q96EZ8 462 aa11.68□□□□□ -0.54
NDEL1-208ENST00000580237 KXD1Q9BQD3 176 aa11.68□□□□□ -0.54
NDEL1-208ENST00000580237 SYT15Q9BQS2 421 aa11.68□□□□□ -0.54
NDEL1-208ENST00000580237 ACBD6Q9BR61 282 aa11.68□□□□□ -0.54
NDEL1-208ENST00000580237 GTPBP4Q9BZE4 634 aaKnown RBP11.68□□□□□ -0.54
NDEL1-208ENST00000580237 IMPG2Q9BZV3 1241 aa11.68□□□□□ -0.54
NDEL1-208ENST00000580237 CRISPLD1Q9H336 500 aa11.68□□□□□ -0.54
NDEL1-208ENST00000580237 SNX25Q9H3E2 840 aa11.68□□□□□ -0.54
NDEL1-208ENST00000580237 MMRN2Q9H8L6 949 aa11.68□□□□□ -0.54
NDEL1-208ENST00000580237 GDE1Q9NZC3 331 aa11.68□□□□□ -0.54
NDEL1-208ENST00000580237 HSFX1Q9UBD0 423 aa11.68□□□□□ -0.54
NDEL1-208ENST00000580237 NXF1Q9UBU9 619 aaKnown RBP11.68□□□□□ -0.54
NDEL1-208ENST00000580237 GREB1Q4ZG55 1949 aa11.68□□□□□ -0.54
NDEL1-208ENST00000580237 TICRRQ7Z2Z1 1910 aa11.68□□□□□ -0.54
NDEL1-208ENST00000580237 MYO16Q9Y6X6 1858 aa11.68□□□□□ -0.54
NDEL1-208ENST00000580237 PSMA7O14818 248 aa11.67□□□□□ -0.54
NDEL1-208ENST00000580237 NARSO43776 548 aaKnown RBP11.67□□□□□ -0.54
NDEL1-208ENST00000580237 FGF19O95750 216 aa11.67□□□□□ -0.54
NDEL1-208ENST00000580237 CFHP08603 1231 aa11.67□□□□□ -0.54
NDEL1-208ENST00000580237 EPB41P11171 864 aaKnown RBP11.67□□□□□ -0.54
NDEL1-208ENST00000580237 SRFP11831 508 aa11.67□□□□□ -0.54
NDEL1-208ENST00000580237 P4HA1P13674 534 aa11.67□□□□□ -0.54
NDEL1-208ENST00000580237 GJA1P17302 382 aa11.67□□□□□ -0.54
NDEL1-208ENST00000580237 ATICP31939 592 aa11.67□□□□□ -0.54
NDEL1-208ENST00000580237 PSMC2P35998 433 aaKnown RBP11.67□□□□□ -0.54
NDEL1-208ENST00000580237 VAMP7P51809 220 aa11.67□□□□□ -0.54
NDEL1-208ENST00000580237 MYL6P60660 151 aa11.67□□□□□ -0.54
NDEL1-208ENST00000580237 PSMC1P62191 440 aaKnown RBP11.67□□□□□ -0.54
NDEL1-208ENST00000580237 NCOA4Q13772 614 aa11.67□□□□□ -0.54
NDEL1-208ENST00000580237 MAPRE1Q15691 268 aaKnown RBP11.67□□□□□ -0.54
NDEL1-208ENST00000580237 SOWAHAQ2M3V2 549 aa11.67□□□□□ -0.54
NDEL1-208ENST00000580237 ARHGAP15Q53QZ3 475 aa11.67□□□□□ -0.54
NDEL1-208ENST00000580237 ZNF667Q5HYK9 610 aa11.67□□□□□ -0.54
NDEL1-208ENST00000580237 TDRD10Q5VZ19 366 aaKnown RBP11.67□□□□□ -0.54
NDEL1-208ENST00000580237 SCARA3Q6AZY7 606 aa11.67□□□□□ -0.54
NDEL1-208ENST00000580237 SCARA5Q6ZMJ2 495 aa11.67□□□□□ -0.54
NDEL1-208ENST00000580237 C4orf50Q6ZRC1 276 aa11.67□□□□□ -0.54
NDEL1-208ENST00000580237 INTS8Q75QN2 995 aaKnown RBP11.67□□□□□ -0.54
NDEL1-208ENST00000580237 DPH6Q7L8W6 267 aa11.67□□□□□ -0.54
NDEL1-208ENST00000580237 OSTM1Q86WC4 334 aa11.67□□□□□ -0.54
NDEL1-208ENST00000580237 FBXL6Q8N531 539 aa11.67□□□□□ -0.54
NDEL1-208ENST00000580237 OR6B3Q8NGW1 331 aa11.67□□□□□ -0.54
NDEL1-208ENST00000580237 TMC2Q8TDI7 906 aa11.67□□□□□ -0.54
NDEL1-208ENST00000580237 PARD3BQ8TEW8 1205 aa11.67□□□□□ -0.54
NDEL1-208ENST00000580237 PSMG2Q969U7 264 aa11.67□□□□□ -0.54
NDEL1-208ENST00000580237 TCEAL4Q96EI5 215 aa11.67□□□□□ -0.54
NDEL1-208ENST00000580237 ASIC4Q96FT7 647 aa11.67□□□□□ -0.54
NDEL1-208ENST00000580237 LPIN3Q9BQK8 851 aa11.67□□□□□ -0.54
NDEL1-208ENST00000580237 PI4K2AQ9BTU6 479 aa11.67□□□□□ -0.54
NDEL1-208ENST00000580237 AVENQ9NQS1 362 aaPredicted RBP11.67□□□□□ -0.54
NDEL1-208ENST00000580237 DMAC2Q9NW81 257 aa11.67□□□□□ -0.54
NDEL1-208ENST00000580237 ASB3Q9Y575 518 aa11.67□□□□□ -0.54
NDEL1-208ENST00000580237 PCDHA5Q9Y5H7 936 aa11.67□□□□□ -0.54
NDEL1-208ENST00000580237 A0A1W2PRU2 124 aa11.66□□□□□ -0.54
NDEL1-208ENST00000580237 ANHXE9PGG2 379 aa11.66□□□□□ -0.54
NDEL1-208ENST00000580237 CETN3O15182 167 aa11.66□□□□□ -0.54
NDEL1-208ENST00000580237 HCRTO43612 131 aa11.66□□□□□ -0.54
NDEL1-208ENST00000580237 GADD45BO75293 160 aaPredicted RBP11.66□□□□□ -0.54
NDEL1-208ENST00000580237 AKAP3O75969 853 aa11.66□□□□□ -0.54
NDEL1-208ENST00000580237 TRIM49P0CI25 452 aa11.66□□□□□ -0.54
NDEL1-208ENST00000580237 TRIM49CP0CI26 452 aa11.66□□□□□ -0.54
NDEL1-208ENST00000580237 HAPLN1P10915 354 aaPredicted RBP11.66□□□□□ -0.54
NDEL1-208ENST00000580237 ATF6P18850 670 aa11.66□□□□□ -0.54
NDEL1-208ENST00000580237 TRIM21P19474 475 aaKnown RBP11.66□□□□□ -0.54
NDEL1-208ENST00000580237 WARSP23381 471 aaKnown RBP11.66□□□□□ -0.54
NDEL1-208ENST00000580237 PRCPP42785 496 aa11.66□□□□□ -0.54
NDEL1-208ENST00000580237 RPL10AP62906 217 aaKnown RBP11.66□□□□□ -0.54
NDEL1-208ENST00000580237 DLG4P78352 724 aa11.66□□□□□ -0.54
NDEL1-208ENST00000580237 CYP27A1Q02318 531 aa11.66□□□□□ -0.54
NDEL1-208ENST00000580237 ADAM9Q13443 819 aa11.66□□□□□ -0.54
NDEL1-208ENST00000580237 TEAD2Q15562 447 aa11.66□□□□□ -0.54
NDEL1-208ENST00000580237 NFIL3Q16649 462 aa11.66□□□□□ -0.54
NDEL1-208ENST00000580237 EDRF1Q3B7T1 1238 aa11.66□□□□□ -0.54
NDEL1-208ENST00000580237 PRSS36Q5K4E3 855 aa11.66□□□□□ -0.54
NDEL1-208ENST00000580237 PARM1Q6UWI2 310 aa11.66□□□□□ -0.54
NDEL1-208ENST00000580237 LRRTM3Q86VH5 581 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms