RNA–Protein interactions for RNA: ENST00000579539.1

DDX42-210, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-210ENST00000579539 PAIP2BQ9ULR5 123 aaKnown RBP6.28□□□□□ -1.4
DDX42-210ENST00000579539 NFE2L3Q9Y4A8 694 aa6.28□□□□□ -1.4
DDX42-210ENST00000579539 MAP3K4Q9Y6R4 1608 aa6.28□□□□□ -1.4
DDX42-210ENST00000579539 ATP10BO94823 1461 aa6.28□□□□□ -1.4
DDX42-210ENST00000579539 ZMYM6O95789 1325 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 ADGRF5Q8IZF2 1346 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 ANKARQ7Z5J8 1434 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 RIMS2Q9UQ26 1411 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 LRRC7Q96NW7 1537 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 GRID2IPA4D2P6 1211 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 BTBD19C9JJ37 291 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 FGF10O15520 208 aaPredicted RBP6.27□□□□□ -1.41
DDX42-210ENST00000579539 HNRNPCL1O60812 293 aaKnown RBP6.27□□□□□ -1.41
DDX42-210ENST00000579539 TMCC1O94876 653 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 NDUFA10O95299 355 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 PAPLNO95428 1278 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 RNASE1P07998 156 aaKnown RBP6.27□□□□□ -1.41
DDX42-210ENST00000579539 POU2F2P09086 479 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 GSTM1P09488 218 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 LINGO3P0C6S8 592 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 GNAT1P11488 350 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 OSMP13725 252 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 CPA3P15088 417 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 PFKFB1P16118 471 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 RASSF2P50749 326 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 RBM5P52756 815 aaKnown RBP eCLIP6.27□□□□□ -1.41
DDX42-210ENST00000579539 PDCLQ13371 301 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 SNX1Q13596 522 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 KPNB1Q14974 876 aaKnown RBP6.27□□□□□ -1.41
DDX42-210ENST00000579539 MAPRE1Q15691 268 aaKnown RBP6.27□□□□□ -1.41
DDX42-210ENST00000579539 ZNF174Q15697 407 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 CFAP221Q4G0U5 840 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 CCDC92Q53HC0 331 aaPredicted RBP6.27□□□□□ -1.41
DDX42-210ENST00000579539 WDR78Q5VTH9 848 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 IRGCQ6NXR0 463 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 Q6ZUG5 572 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 CCDC149Q6ZUS6 474 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 ZNF365Q70YC5 407 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 WAPLQ7Z5K2 1190 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 PIGWQ7Z7B1 504 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 CPNE8Q86YQ8 564 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 MYLK4Q86YV6 388 aaPredicted RBP6.27□□□□□ -1.41
DDX42-210ENST00000579539 GRAMD1CQ8IYS0 662 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 MIER2Q8N344 545 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 NKAPQ8N5F7 415 aaKnown RBP6.27□□□□□ -1.41
DDX42-210ENST00000579539 ZNF655Q8N720 491 aaPredicted RBP6.27□□□□□ -1.41
DDX42-210ENST00000579539 SPATA20Q8TB22 786 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 MAIP1Q8WWC4 291 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 DPF2Q92785 391 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 ASIC4Q96FT7 647 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 CHMP6Q96FZ7 201 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 PHACTR3Q96KR7 559 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 GSDMAQ96QA5 445 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 MMS19Q96T76 1030 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 SLF1Q9BQI6 1058 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 TUBB6Q9BUF5 446 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 YIPF3Q9GZM5 350 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 RAB17Q9H0T7 212 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 NDST4Q9H3R1 872 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 PCIF1Q9H4Z3 704 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 CCDC134Q9H6E4 229 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 AS3MTQ9HBK9 375 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 TMBIM4Q9HC24 238 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 PCDH18Q9HCL0 1135 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 PRDM5Q9NQX1 630 aaPredicted RBP6.27□□□□□ -1.41
DDX42-210ENST00000579539 GDF3Q9NR23 364 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 EXOC1Q9NV70 894 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 HAUS2Q9NVX0 235 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 UTP6Q9NYH9 597 aaKnown RBP6.27□□□□□ -1.41
DDX42-210ENST00000579539 IL1RAPL1Q9NZN1 696 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 ADD3Q9UEY8 706 aaKnown RBP6.27□□□□□ -1.41
DDX42-210ENST00000579539 LIMA1Q9UHB6 759 aaKnown RBP6.27□□□□□ -1.41
DDX42-210ENST00000579539 SCOCQ9UIL1 159 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 GTF2A1LQ9UNN4 478 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 SLC12A4Q9UP95 1085 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 POLHQ9Y253 713 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 GPR45Q9Y5Y3 372 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.27□□□□□ -1.41
DDX42-210ENST00000579539 ABCC12Q96J65 1359 aa6.27□□□□□ -1.41
DDX42-210ENST00000579539 WDR19Q8NEZ3 1342 aa6.26□□□□□ -1.41
DDX42-210ENST00000579539 KAT6BQ8WYB5 2073 aa6.26□□□□□ -1.41
DDX42-210ENST00000579539 CDC42BPBQ9Y5S2 1711 aa6.26□□□□□ -1.41
DDX42-210ENST00000579539 PNMA6EA0A0J9YXQ4 647 aa6.26□□□□□ -1.41
DDX42-210ENST00000579539 CCDC162PA2VCL2 907 aa6.26□□□□□ -1.41
DDX42-210ENST00000579539 FAM227AF5H4B4 570 aa6.26□□□□□ -1.41
DDX42-210ENST00000579539 O00370 1275 aa6.26□□□□□ -1.41
DDX42-210ENST00000579539 BIRC5O15392 142 aa6.26□□□□□ -1.41
DDX42-210ENST00000579539 PQBP1O60828 265 aaKnown RBP6.26□□□□□ -1.41
DDX42-210ENST00000579539 TAF5LO75529 589 aa6.26□□□□□ -1.41
DDX42-210ENST00000579539 FAM163BP0C2L3 166 aa6.26□□□□□ -1.41
DDX42-210ENST00000579539 TROVE2P10155 538 aaKnown RBP eCLIP6.26□□□□□ -1.41
DDX42-210ENST00000579539 COL6A1P12109 1028 aa6.26□□□□□ -1.41
DDX42-210ENST00000579539 NQO1P15559 274 aaKnown RBP6.26□□□□□ -1.41
DDX42-210ENST00000579539 ACADSP16219 412 aa6.26□□□□□ -1.41
DDX42-210ENST00000579539 EIF2S2P20042 333 aaKnown RBP6.26□□□□□ -1.41
DDX42-210ENST00000579539 ATP6V1C1P21283 382 aa6.26□□□□□ -1.41
DDX42-210ENST00000579539 KRT9P35527 623 aa6.26□□□□□ -1.41
DDX42-210ENST00000579539 HSPA9P38646 679 aaKnown RBP6.26□□□□□ -1.41
DDX42-210ENST00000579539 BCL6P41182 706 aa6.26□□□□□ -1.41
DDX42-210ENST00000579539 KIR3DL1P43629 444 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms